BAC Information

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BAC

Clone NameB6Ng01-146L19
Chromosome4 (Build37)
Map Location 36,977,322 - 37,144,800
singlet/doubletdoublet
Overlap geneLOC545600
Upstream geneLOC100042132
Downstream geneLOC621458, LOC277771
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L19.bB6Ng01-146L19.g
ACCDH943799DH943800
length1,1631,125
definitionDH943799|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L19, 5' end.DH943800|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,143,630 - 37,144,800)(36,977,322 - 36,978,456)
sequence
gaattctaaatttagagattgattgaaacatcagtcctccctcacttgcc
tacccacaacttccaactctctttacatttacctgccttaaccagtaggt
atcacaatctctaacataaaaactctaccttgccttatactgtacacatc
ccaaatcaactcaaaggtttctcatactcccccagctaaatgaacagact
tcctcatactctcccaacccaagggactggctgttcttcccctttccctt
tagctttcagactatctgaaatgcctcttagcatacctaaatgaagcact
tgcctttctttccccttcaagcttctttcctacacacccaggtcatcagt
gacaaaattagaactgtgaggaacactccaccttgtaaactactctatag
aattgtaaaacacagacttcaagatttcataacaacttaataagaaaaaa
agggtgtaaaatgtgtagtgatgggtcctaagggtgatgttcagaaactt
gaaaaaaaaaatacaattttgtgtcccactgaaaatgtccatagtcagca
atcctgtcacctggcagtattttgtttgcatgataggctgctctgggtag
tttgatcagcttgaatatttttattataaaatttaaatcaaatgaaagtc
tcattagtcagtgtatcttatcattgatgtgccaaaaccttactccaata
atgcaaatattttgaagacataaattcaagcttggctctgactgacttcc
acagggttactgccttgtaataccgcattactgtctgggatgcctggagc
aaggctggagtaaagcagaggcatagcatagcctctgtaatggatcccca
gggctgttcaattcaagccagtcatgttgattagagacattgaatctata
tcaagagaagtttttgttaggttatcctgaactagcagttcttcaaattc
acaagacaaaatattggcaggcttactttatacatctgagtaatggttca
ttaaacagatttaatctcatgaaataaccaggttaatgagtatttctaaa
tcatggaaatcctcagagtaaatatattgtcttgcaatgactattctatt
cccaacagctagattgaatcattcttagatcttactcctggaatagaaca
aaactggaataaa
gaattctcaggcaaggaggttatgcatatagctcaagttccatactttgg
tatacgaaatataccaaactatacctgtgggaaaataattgtgctacttt
ttgtgttttggaaatatcaaaagggaaccaattttcaagctgtcatcctc
aaagtatattctaggctacattttgaatgtttgtgatcttcttttggcca
atggatcaagaattggttaaagctgataaaatatacttattatgtacatt
gtattattagcacttctaattcttatttctaattttgcatttgtatttaa
atagatcaagcctgttggtaattaggactaaggaattcatctgatttaag
tcaaaatatggggatttcagctttaaaattttctttagcctgtaggattc
ccaattaacaaaacaatttcatggcctgattttatcttgtacttgtgtcc
ttctgtacctttgtagtctctgttaaccatcttccaggaaatagttttaa
aatgtttcaaatagatattgtgggtaaaataatttctctgttgtatagct
acactaggtatctacttacaatttttctggcatctattaggtaaatataa
gtcacctcttccatactttataacaaaatggcttctagccaccattaaat
gtttcccaaaatgataagttgccctagcttttaagcattgttatcactct
taatttcactcaaaatttcatattttcattaagaaatgtagccaacatca
gaaaacctttaaatcttctgtaatcatgaggtggtagaaagccttggatg
catgtgattttaggaatatgtccaactggactgatttcgagttaaaaata
aataatttcataatttaatggtcaacattttaactttactgtgaaacaga
ctgatgttttctttctcaagggcttttgagtacagacactgagtgtataa
caccatagttcattggtgaatgagctcagattttgagctcacccaggaaa
atggtgttagttttgtcctaagatccagatgatatgcactcaccaatagt
atagtgaatattagcccagagctcagagtaccagaattcatttgctaaac
cataatctagagaaggaagaaccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37143630_37144800
seq2: B6Ng01-146L19.b_45_1207 (reverse)

seq1  TTTATATCCAGTTTTTGTCTTATTCAAGGAGTGTAGATCTAAGAATTGAT  50
      ||||| ||||| ||||||  ||||| ||||||  ||||||||||| ||||
seq2  TTTAT-TCCAG-TTTTGTTCTATTCCAGGAGT-AAGATCTAAGAA-TGAT  46

seq1  TCAACTCTTAGCTGGTTGGGATAG-ATAGTCATTGCAAAGACAATATATT  99
      |||| || |||||| | || |||| ||||||||||| |||||||||||||
seq2  TCAA-TC-TAGCTGTTGGGAATAGAATAGTCATTGC-AAGACAATATATT  93

seq1  TACTCCTGAGGATTT-CATGATTAAGAAATACTCAATAAACTGGTTATTT  148
      |||| |||||||||| ||||||| ||||||||||| ||| ||||||||||
seq2  TACT-CTGAGGATTTCCATGATTTAGAAATACTCATTAACCTGGTTATTT  142

seq1  CATGAGATTAAATCTGGTTAATGAACCATTTACTCAGATGTATTAAGTAA  198
      |||||||||||||||| ||||||||||| |||||||||||||| ||||||
seq2  CATGAGATTAAATCTGTTTAATGAACCA-TTACTCAGATGTATAAAGTAA  191

seq1  GCCTGCCATATTTTTGTCTTTGTGGATTTGAAGAACTGCTAGTTCAGGAT  248
      ||||||||   ||||||| ||||| |||||||||||||||||||||||||
seq2  GCCTGCCAATATTTTGTC-TTGTGAATTTGAAGAACTGCTAGTTCAGGAT  240

seq1  AACCTAACATAAACTTCTCTTGATATAGATTCAATGTCTCTAATCAACAT  298
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAACAAAAACTTCTCTTGATATAGATTCAATGTCTCTAATCAACAT  290

seq1  GACTGGCTTGAATTGAACAGCCCTGGGGATCCATTACAGAGGCTATGCTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCTTGAATTGAACAGCCCTGGGGATCCATTACAGAGGCTATGCTA  340

seq1  TGCCTCTGCTTTACTCCAGCCTTGCTCCAGGCATCCCAGACAGTAATGCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCTTTACTCCAGCCTTGCTCCAGGCATCCCAGACAGTAATGCG  390

seq1  GTATTACAAGGCAGTAACCCTGTGGAAGTCAGTCAGAGCCAAGCTTGAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACAAGGCAGTAACCCTGTGGAAGTCAGTCAGAGCCAAGCTTGAAT  440

seq1  TTATGTCTTCAAAATATTTGCATTATTGGAGTAAGGTTTTGGCACATCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTTCAAAATATTTGCATTATTGGAGTAAGGTTTTGGCACATCAA  490

seq1  TGATAAGATACACTGACTAATGAGACTTTCATTTGATTTAAATTTTATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGATACACTGACTAATGAGACTTTCATTTGATTTAAATTTTATAA  540

seq1  TAAAAATATTCAAGCTGATCAAACTACCCAGAGCAGCCTATCATGCAAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATATTCAAGCTGATCAAACTACCCAGAGCAGCCTATCATGCAAAC  590

seq1  AAAATACTGCCAGGTGACAGGATTGCTGACTATGGACATTTTCAGTGGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTGCCAGGTGACAGGATTGCTGACTATGGACATTTTCAGTGGGA  640

seq1  CACAAAATTGTATTTTTTTTTTCAAGTTTCTGAACATCACCCTTAGGACC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATTGTATTTTTTTTTTCAAGTTTCTGAACATCACCCTTAGGACC  690

seq1  CATCACTACACATTTTACACCCTTTTTTTCTTATTAAGTTGTTATGAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTACACATTTTACACCCTTTTTTTCTTATTAAGTTGTTATGAAAT  740

seq1  CTTGAAGTCTGTGTTTTACAATTCTATAGAGTAGTTTACAAGGTGGAGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGTCTGTGTTTTACAATTCTATAGAGTAGTTTACAAGGTGGAGTG  790

seq1  TTCCTCACAGTTCTAATTTTGTCACTGATGACCTGGGTGTGTAGGAAAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACAGTTCTAATTTTGTCACTGATGACCTGGGTGTGTAGGAAAGA  840

seq1  AGCTTGAAGGGGAAAGAAAGGCAAGTGCTTCATTTAGGTATGCTAAGAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAAGGGGAAAGAAAGGCAAGTGCTTCATTTAGGTATGCTAAGAGG  890

seq1  CATTTCAGATAGTCTGAAAGCTAAAGGGAAAGGGGAAGAACAGCCAGTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGATAGTCTGAAAGCTAAAGGGAAAGGGGAAGAACAGCCAGTCC  940

seq1  CTTGGGTTGGGAGAGTATGAGGAAGTCTGTTCATTTAGCTGGGGGAGTAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTGGGAGAGTATGAGGAAGTCTGTTCATTTAGCTGGGGGAGTAT  990

seq1  GAGAAACCTTTGAGTTGATTTGGGATGTGTACAGTATAAGGCAAGGTAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCTTTGAGTTGATTTGGGATGTGTACAGTATAAGGCAAGGTAGA  1040

seq1  GTTTTTATGTTAGAGATTGTGATACCTACTGGTTAAGGCAGGTAAATGTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATGTTAGAGATTGTGATACCTACTGGTTAAGGCAGGTAAATGTA  1090

seq1  AAGAGAGTTGGAAGTTGTGGGTAGGCAAGTGAGGGAGGACTGATGTTTCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTTGGAAGTTGTGGGTAGGCAAGTGAGGGAGGACTGATGTTTCA  1140

seq1  ATCAATCTCTAAATTTAGAATTC  1171
      |||||||||||||||||||||||
seq2  ATCAATCTCTAAATTTAGAATTC  1163

seq1: chr4_36977322_36978456
seq2: B6Ng01-146L19.g_70_1194

seq1  GAATTCTCAGGCAAGGAGGTTATGCATATAGCTCAAGTTCCATACTTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGCAAGGAGGTTATGCATATAGCTCAAGTTCCATACTTTGG  50

seq1  TATACGAAATATACCAAACTATACCTGTGGGAAAATAATTGTGCTACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGAAATATACCAAACTATACCTGTGGGAAAATAATTGTGCTACTTT  100

seq1  TTGTGTTTTGGAAATATCAAAAGGGAACCAATTTTCAAGCTGTCATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTGGAAATATCAAAAGGGAACCAATTTTCAAGCTGTCATCCTC  150

seq1  AAAGTATATTCTAGGCTACATTTTGAATGTTTGTGATCTTCTTTTGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATATTCTAGGCTACATTTTGAATGTTTGTGATCTTCTTTTGGCCA  200

seq1  ATGGATCAAGAATTGGTTAAAGCTGATAAAATATACTTATTATGTACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCAAGAATTGGTTAAAGCTGATAAAATATACTTATTATGTACATT  250

seq1  GTATTATTAGCACTTCTAATTCTTATTTCTAATTTTGCATTTGTATTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTAGCACTTCTAATTCTTATTTCTAATTTTGCATTTGTATTTAA  300

seq1  ATAGATCAAGCCTGTTGGTAATTAGGACTAAGGAATTCATCTGATTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCAAGCCTGTTGGTAATTAGGACTAAGGAATTCATCTGATTTAAG  350

seq1  TCAAAATATGGGGATTTCAGCTTTAAAATTTTCTTTAGCCTGTAGGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATATGGGGATTTCAGCTTTAAAATTTTCTTTAGCCTGTAGGATTC  400

seq1  CCAATTAACAAAACAATTTCATGGCCTGATTTTATCTTGTACTTGTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTAACAAAACAATTTCATGGCCTGATTTTATCTTGTACTTGTGTCC  450

seq1  TTCTGTACCTTTGTAGTCTCTGTTAACCATCTTCCAGGAAATAGTTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTACCTTTGTAGTCTCTGTTAACCATCTTCCAGGAAATAGTTTTAA  500

seq1  AATGTTTCAAATAGATATTGTGGGTAAAATAATTTCTCTGTTGTATAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCAAATAGATATTGTGGGTAAAATAATTTCTCTGTTGTATAGCT  550

seq1  ACACTAGGTATCTACTTACAATTTTTCTGGCATCTATTAGGTAAATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGGTATCTACTTACAATTTTTCTGGCATCTATTAGGTAAATATAA  600

seq1  GTCACCTCTTCCATAC-TTATAACAAAATGGCTTCTAGCCACCATTAAAT  649
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTCACCTCTTCCATACTTTATAACAAAATGGCTTCTAGCCACCATTAAAT  650

seq1  GTTTCCCAAAATGATAAGTTGCCCTAGCTTTTAAGCATTGTTATCACTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCAAAATGATAAGTTGCCCTAGCTTTTAAGCATTGTTATCACTCT  700

seq1  TAATTTCACTCAAAATTTCATATTTTCATTAAGAAATGTAGCCAACATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCACTCAAAATTTCATATTTTCATTAAGAAATGTAGCCAACATCA  750

seq1  GAAAACCTTTAAATCTTCTGTAATCATGAGGTGGTAGAAAGCCTTGGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTTTAAATCTTCTGTAATCATGAGGTGGTAGAAAGCCTTGGATG  800

seq1  CATGTGATTTTAGGAATATGTCCAACTGGACTGATTTCGAGTTAAAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGATTTTAGGAATATGTCCAACTGGACTGATTTCGAGTTAAAAATA  850

seq1  AATAATTTCAT-ATTTAATGGTCAACATATTAAACTTTACTGTGAAACAG  898
      ||||||||||| |||||||||||||||| || ||||||||||||||||||
seq2  AATAATTTCATAATTTAATGGTCAACAT-TTTAACTTTACTGTGAAACAG  899

seq1  ACTGATG-TTTCTTTCTCAAGGCCTCTGAGGTACAGACAACTGAGTGTAT  947
      ||||||| |||||||||||||| || |   |||||||| |||||||||||
seq2  ACTGATGTTTTCTTTCTCAAGGGCTTTTGAGTACAGAC-ACTGAGTGTAT  948

seq1  AACA-CATAGTTCATTGGTGAATGAGCTCAGATTTTTGAGCTCACCCCAA  996
      |||| ||||||||||||||||||||||||||| ||||||||||||||  |
seq2  AACACCATAGTTCATTGGTGAATGAGCTCAGA-TTTTGAGCTCACCC--A  995

seq1  GGAAAAATGGTGTTAGTTTTGTCCTAAGAACACAGATGATATGCACTCAC  1046
      || |||||||||||||||||||||||||| | ||||||||||||||||||
seq2  GG-AAAATGGTGTTAGTTTTGTCCTAAGATC-CAGATGATATGCACTCAC  1043

seq1  CAATAGATAAGTGAATATTAGCCCAGAAGCTCAGAGTACCCAAGATACAA  1096
      ||||||   ||||||||||||||||| |||||||||||||  |||    |
seq2  CAATAGTATAGTGAATATTAGCCCAG-AGCTCAGAGTACC--AGAATTCA  1090

seq1  TTTGCAAAACACATGAAACTCAAGAAGAAGGAAG-ACCAA  1135
      ||||| |||| |||   | || || ||||||||| |||||
seq2  TTTGCTAAAC-CAT---AATCTAG-AGAAGGAAGAACCAA  1125