BAC Information

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BAC

Clone NameB6Ng01-147D18
Chromosome4 (Build37)
Map Location 55,890,924 - 56,084,823
singlet/doubletdoublet
Overlap genenone
Upstream geneEG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
Downstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147D18.bB6Ng01-147D18.g
ACCDH944173DH944174
length1,0821,167
definitionDH944173|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D18, 5' end.DH944174|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,890,924 - 55,892,012)(56,083,645 - 56,084,823)
sequence
gaattccacacggaagatgataacttctttttagcctttgtacacgtcta
gctttcccaggtttgataaggcttagagaaggatgtcctcagcacagact
cttgaatgcaggaggctctggacagatgctctttcttttggagtgaggaa
gtagagattccaaagaaggagcttactataggtgacctaaaggaggctcc
agctcttctgacctctgctattttgggcctgtattctaacccagttttga
ggatgtgaaggaggtgtctctgtgcagatactgggctgttgttaaattta
attgtgtgtgtgtgttcctgtatatgtacaagaatatggaggtcaaatgt
catcttcaaaggttgtcctccatcactgttcaccttaatttttgagacag
gatctctcattgaacctggacctcaaaaaacagtaacacgttctaatgat
cctctggtctctgtctcttcaaagctgggagtacacatacacactgccac
acttgacctttcccatgggttctgggaatggaagtcacactcatgcagaa
agcattttgatgactgatcatctcttcagaaatgctttcttctaacatca
gagatgaaagctaaaaaaaaaaaatccttcaatactgcatctctgatctt
agcttacctgctggctggtcaagtcagcacttggtcttaacctctgagaa
ataagggttttggcattacagtcgtgaaaacctcttgaagtcttgccact
ctagactgtggtgattagagatggctctggaggtggaatgtgcacttggt
aggcaaaggaagctgagtgcaaatattctcaccgcgttgtgtggatcttg
ccatctggttagcattttggcatagtaagtttctccattctaggtgtttg
gatttctactactcccttcactaggacatctctataaacttccaaggaac
ggaaaagaaagaaacaggagcagcatttaaatatttgagtgacttcaggg
tctgtctgagtgttggactaattagctgaatcagtttttataactttgcc
tgaccacactaatggaactcgagagattatta
gaattctgtagagagggaaatattgaaagccaaaattaaattatcaagat
gaaaagataaaacaagaatttatggcctcaagatgccactagccgtgttt
aaaatgaatgtctgcagaaacacccaaagccaatgtcgtacttaaaacta
agagcaaaaattcaatccaagggagggtcacagataggtagaaaacagat
accctggaacatgaacaaagggctaataaaatcctagtggattctttagg
aaacacaaactgagctccattcagagatgtgtggctctccaaggtgaaac
tacattttttagttgttagtttaaaaagtaccaagcctcaatcattgtgg
gtcccagtagccaggaagatcatcagatgagttgaggatggaaccccttg
tcttctctagacatgtcatccttgaaatctgcaactttgacaagcatgtg
taatttttcagcaaattatgtggagataataataacattatctaggtctt
ttcttcaaactgatccatatttattcatacttaagctcatggattcagga
aaatttgtaaactccgatccactaatcataatgtggaacctatgggtcat
cctgctttaatgatagcatcccctgtttacatggagatttttacattata
agaacaacagctgggaccctcagtgtatttataaatgctttccatgtgtc
atcttacttaatctttttattaatttgtacggctaagctctatttacatc
tcacaaatcataaaactaagacagagaagaccagagctcaccccaaacca
tgaggcacagcgttcggaatcagccacagcaagcacaagctgtatctgtc
agttgactctctcaaccctctcagataaagagagtgatgattctgtgaag
aggaactgttctgggactaattattttccacccaagacaatgatgagagc
atcactgagactggttggaaagcttgaaacaagttcccaacttcagttgc
tgttgggcttgatgttgccatttcaaggaaatccaatgctggaaacacag
acctctggggctaaggcagcaaatgttgtttgcttgacttcaatctgctc
tcccaagtatctaaacaacaaactctcatttacatggcctaattggtctg
tgactgcgtggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55890924_55892012
seq2: B6Ng01-147D18.b_50_1131

seq1  GAATTCCACACGGAAGATGATAACTTCTTTTTAGCCTTTGTACACGTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACGGAAGATGATAACTTCTTTTTAGCCTTTGTACACGTCTA  50

seq1  GCTTTCCCAGGTTTGATAAGGCTTAGAGAAGGATGTCCTCAGCACAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCCAGGTTTGATAAGGCTTAGAGAAGGATGTCCTCAGCACAGACT  100

seq1  CTTGAATGCAGGAGGCTCTGGACAGATGCTCTTTCTTTTGGAGTGAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGCAGGAGGCTCTGGACAGATGCTCTTTCTTTTGGAGTGAGGAA  150

seq1  GTAGAGATTCCAAAGAAGGAGCTTACTATAGGTGACCTAAAGGAGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATTCCAAAGAAGGAGCTTACTATAGGTGACCTAAAGGAGGCTCC  200

seq1  AGCTCTTCTGACCTCTGCTATTTTGGGCCTGTATTCTAACCCAGTTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCTGACCTCTGCTATTTTGGGCCTGTATTCTAACCCAGTTTTGA  250

seq1  GGATGTGAAGGAGGTGTCTCTGTGCAGATACTGGGCTGTTGTTAAATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGAAGGAGGTGTCTCTGTGCAGATACTGGGCTGTTGTTAAATTTA  300

seq1  ATTGTGTGTGTGTGTTCCTGTATATGTACAAGAATATGGAGGTCAAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGTGTGTGTTCCTGTATATGTACAAGAATATGGAGGTCAAATGT  350

seq1  CATCTTCAAAGGTTGTCCTCCATCACTGTTCACCTTAATTTTTGAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCAAAGGTTGTCCTCCATCACTGTTCACCTTAATTTTTGAGACAG  400

seq1  GATCTCTCATTGAACCTGGACCTCAAAAAACAGTAACACGTTCTAATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTCATTGAACCTGGACCTCAAAAAACAGTAACACGTTCTAATGAT  450

seq1  CCTCTGGTCTCTGTCTCTTCAAAGCTGGGAGTACACATACACACTGCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTCTCTGTCTCTTCAAAGCTGGGAGTACACATACACACTGCCAC  500

seq1  ACTTGACCTTTCCCATGGGTTCTGGGAATGGAAGTCACACTCATGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACCTTTCCCATGGGTTCTGGGAATGGAAGTCACACTCATGCAGAA  550

seq1  AGCATTTTGATGACTGATCATCTCTTCAGAAATGCTTTCTTCTAACATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTGATGACTGATCATCTCTTCAGAAATGCTTTCTTCTAACATCA  600

seq1  GAGATGAAAGCTAAAAAAAAAAAATCCTTCAATACTGCATCTCTGATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAAAGCTAAAAAAAAAAAATCCTTCAATACTGCATCTCTGATCTT  650

seq1  AGCTTACCTGCTGGCTGGTCAAGTCAGCACTTGGTCTTAACCTCTGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACCTGCTGGCTGGTCAAGTCAGCACTTGGTCTTAACCTCTGAGAA  700

seq1  ATAAGGGTTTTGGCATTACAGTCGTGAAAACCTCTTGAAGTCTTGCCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTTTTGGCATTACAGTCGTGAAAACCTCTTGAAGTCTTGCCACT  750

seq1  CTAGACTGTGGTGATTAGAGATGGCTCTGGAGGTGGAATGTGCACTTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACTGTGGTGATTAGAGATGGCTCTGGAGGTGGAATGTGCACTTGGT  800

seq1  AGGCAAAGGAAGCTGAGTGCAAATATTCTCACCGCGTTGTGTGGATCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGAAGCTGAGTGCAAATATTCTCACCGCGTTGTGTGGATCTTG  850

seq1  CCATCTGGTTAGCAATTTGGCATTAGTAAGTTTCTCCATTCTAGGTGTTT  900
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  CCATCTGGTTAGCATTTTGGCA-TAGTAAGTTTCTCCATTCTAGGTGTTT  899

seq1  GGATTTCTACTACTCCCTTCACTAGGACATCTCTATAAAAACTTCCAAGG  950
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  GGATTTCTACTACTCCCTTCACTAGGACATCTCTAT--AAACTTCCAAGG  947

seq1  AACGGAAAAGAAAGAAACAGGAGCAGCATTTAAATATTTGAGTTGACTTC  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACGGAAAAGAAAGAAACAGGAGCAGCATTTAAATATTTGAG-TGACTTC  996

seq1  AGGGTCTGTTCTGAGTGTTGGACTAATTAGCTGATTCAGTTTTTATAACT  1050
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  AGGGTCTG-TCTGAGTGTTGGACTAATTAGCTGAATCAGTTTTTATAACT  1045

seq1  TTGCACTGAACAACACTAAATGAACTC-AGATGATTATTA  1089
      |||| ||| || |||||||  |||||| ||| ||||||||
seq2  TTGC-CTG-ACCACACTAATGGAACTCGAGA-GATTATTA  1082

seq1: chr4_56083645_56084823
seq2: B6Ng01-147D18.g_73_1239 (reverse)

seq1  TCCT-CCCACGCAGTCACAGAACCACAACTAAGCCATAGTAAATAGGAAG  49
      |||| ||||||||||||||||    ||| || ||||| ||||||  ||  
seq2  TCCTCCCCACGCAGTCACAGA---CCAATTAGGCCAT-GTAAATGAGAGT  46

seq1  TTGCTGTTCTAGTAACTGGGGAGAGCAGATGGATGTCAAAGCAAAC-ACA  98
      ||| |||| |||  ||| |||||||||||| || ||| |||||||| |||
seq2  TTGTTGTT-TAGATACTTGGGAGAGCAGATTGAAGTC-AAGCAAACAACA  94

seq1  TTCTGCTGGCTCTGGCCCAGAGCTCTTGCTGTCTCAGCCTTTGGATTTCC  148
      || ||||| ||  | ||||||| |||   ||| ||   | ||||||||||
seq2  TT-TGCTGCCTTAGCCCCAGAGGTCT--GTGTTTCCAGCATTGGATTTCC  141

seq1  TGGAATGGGCTACATCAAGCCCAACAGCAACTGAAGTTGGGGAACTTGTT  198
      | |||  ||| ||||||||||||||||||||||||||| |||||||||||
seq2  TTGAAATGGCAACATCAAGCCCAACAGCAACTGAAGTT-GGGAACTTGTT  190

seq1  TCAAAGCTTTCCAAACAGTCTCAGTGATGCTCTCATCATTGTCTTGGGTG  248
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TC-AAGCTTTCCAACCAGTCTCAGTGATGCTCTCATCATTGTCTTGGGTG  239

seq1  GAAAATAACTTAGTCCCAGAACAGTTCCCTCTTCACAGAATCATCACTCT  298
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  GAAAATAA-TTAGTCCCAGAACAGTT-CCTCTTCACAGAATCATCACTCT  287

seq1  CTTTATTCTTGAGA-GGTTGAGAGAGTCAACTGACAGATTACAGCTTGTG  347
      ||||||   ||||| ||||||||||||||||||||||| |||||||||||
seq2  CTTTAT--CTGAGAGGGTTGAGAGAGTCAACTGACAGA-TACAGCTTGTG  334

seq1  CTTGCTGTGGCTGATTCCGAACGCTTGTGCCTCATGGTTTGGGGTGAGCT  397
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTGCTGTGGCTGATTCCGAACGC-TGTGCCTCATGGTTTGGGGTGAGCT  383

seq1  CTGGTCTTCTCTGTCTTGGTTTTATGATTTGTGAGATGTAAATAGAGCTT  447
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGGTCTTCTCTGTCTTAGTTTTATGATTTGTGAGATGTAAATAGAGCTT  433

seq1  AGCCGTAC-AATTAATAAAAAGATTAAGTAAGATGACACATGGAAAGCAT  496
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTACAAATTAATAAAAAGATTAAGTAAGATGACACATGGAAAGCAT  483

seq1  TTATAAATACACTGAGGGTCCCAGCTGTTGTTCTTATAATGT-AAAATCT  545
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTATAAATACACTGAGGGTCCCAGCTGTTGTTCTTATAATGTAAAAATCT  533

seq1  CCATGTAAACAGGGGATGCTATCATTAAAGCAGGATGACCCATAGGTTCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAAACAGGGGATGCTATCATTAAAGCAGGATGACCCATAGGTTCC  583

seq1  ACATTATGATTAGTGGATCGGAGTTTACAAATTTTCCTGAATCCATGAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATGATTAGTGGATCGGAGTTTACAAATTTTCCTGAATCCATGAGC  633

seq1  TTAAGTATGAATAAATATGGATCAGTTTGAAGAAAAGACCTAGATAATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATGAATAAATATGGATCAGTTTGAAGAAAAGACCTAGATAATGT  683

seq1  TATTATTATCTCCACATAATTTGCTGAAAAATTACACATGCTTGTCAAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATCTCCACATAATTTGCTGAAAAATTACACATGCTTGTCAAAG  733

seq1  TTGCAGATTTCAAGGATGACATGTCTAGAGAAGACAAGGGGTTCCATCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATTTCAAGGATGACATGTCTAGAGAAGACAAGGGGTTCCATCCT  783

seq1  CAACTCATCTGATGATCTTCCTGGCTACTGGGACCCACAATGATTGAGGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCATCTGATGATCTTCCTGGCTACTGGGACCCACAATGATTGAGGC  833

seq1  TTGGTACTTTTTAAACTAACAACTAAAAAATGTAGTTTCACCTTGGAGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACTTTTTAAACTAACAACTAAAAAATGTAGTTTCACCTTGGAGAG  883

seq1  CCACACATCTCTGAATGGAGCTCAGTTTGTGTTTCCTAAAGAATCCACTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACATCTCTGAATGGAGCTCAGTTTGTGTTTCCTAAAGAATCCACTA  933

seq1  GGATTTTATTAGCCCTTTGTTCATGTTCCAGGGTATCTGTTTTCTACCTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTATTAGCCCTTTGTTCATGTTCCAGGGTATCTGTTTTCTACCTA  983

seq1  TCTGTGACCCTCCCTTGGATTGAATTTTTGCTCTTAGTTTTAAGTACGAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACCCTCCCTTGGATTGAATTTTTGCTCTTAGTTTTAAGTACGAC  1033

seq1  ATTGGCTTTGGGTGTTTCTGCAGACATTCATTTTAAACACGGCTAGTGGC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTTGGGTGTTTCTGCAGACATTCATTTTAAACACGGCTAGTGGC  1083

seq1  ATCTTGAGGCCATAAATTCTTGTTTTATCTTTTCATCTTGATAATTTAAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGGCCATAAATTCTTGTTTTATCTTTTCATCTTGATAATTTAAT  1133

seq1  TTTGGCTTTCAATATTTCCCTCTCTACAGAATTC  1179
      ||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTCAATATTTCCCTCTCTACAGAATTC  1167