BAC Information

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BAC

Clone NameB6Ng01-147F20
Chromosome4 (Build37)
Map Location 36,162,149 - 36,163,298
singlet/doubletsinglet
Overlap genenone
Upstream gene3110043O21Rik, LOC621227, Lingo2
Downstream geneLOC100042132, LOC545600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147F20.bB6Ng01-147F20.g
ACCDH944267DH944268
length1,140893
definitionDH944267|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F20, 5' end.DH944268|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggatgtcagagaaaattaatacagttttgaatacagtaaatt
tgaaacatctaatttttgcaatcaagaggtatctagagagttgtttattt
tcaataagtctcaaataagcaattggagaaatgaatgaaagcatgattta
cccttcaccgttgaaaacaaatcaataacacgaagtgttctttctttctc
tgttgttatgggaagtaaagattatgaaaggaagggtaactggaatgatt
aagaaaagaataagtcaatgttcaggagtccaagatggccaggctattct
gcaggacatgttttcgcaagcagccctgcaccctgattgtggaaatgacc
tgggaaatgtgaccaagtgtaccaggagtacctgctgcaattctaatgtt
cactaaagcttaataacgaacaatgtggtatggatctaaagtcagtcaga
ataagagcgtagtagattttatacttctccactaacaaagaacttctgaa
attaactgaaagttcttatggacacttccatcatgggagaaagaaatttt
gtatcacagtgtggttgaaagacaggctgggtgagctacacctctaggtc
atttttattaatacactttttatatattctgaattaatatgtgagctgtg
aaacccttaagatgtcctgtctcatttacataaaagatagaaataaaatg
ttccagttaatcattgaggcatatgtgctgagtttcagttgattagtttt
gtttgcatgagatttctgattagcagcagccctaaattcagtctacagca
tccccattgatatttgtatcctgtagcaactatatacaagagaaaatcac
ttcaattctcagaatatattgtttcttccccactctggtatatcaaggac
aaaattacaataatttgacttcacattcttcatggcttgacttcatgata
cttcagcagatttagctgagggattgtacttgtagccagagaagacctgg
agaaagcagaaacaaagattgaaaaacagattaacccttgaaaaactgta
aatagggatcaaacaatagaaaaaaaatagtatatccttctatactccag
gtaagtcttttaggtgagcattgtgaatggaatgaaagaa

gaattctcaatttgaggaatctcaaatggctgaaaagcacctaaagaaat
gttcaacatcattagtcatcagtgaaatggaaatcaaaataaccctgaga
ttccacctcacaccaatcagaatgactaagattaaaaacacaggtaacag
cagatgctggcgagtgtggagaaagaggaacactcttcaattgctggtgg
gattttaagctgctaaaactactttggaaaacaatctgttcctcagaaaa
ctggaaattcttctacatgaagacccagctataccactactaggcatata
ccccaaacacactccaatggataacaaggacacatgctctagtatgtttg
gaatagacttatttataataaccagaagctggaaacaaccaagatgtcct
tcaatggaagaatgaatacagaaaatgtgatacatttacacaatgaagta
gtactcagctatttaaaacaatgacttcatgaaattcgcaggcaatggat
ggaactagaaaatatcattctgagataacccagacacaaaaggacacatg
tggtatatactcatagtaaatggatattaccccaaaagctcagaatatcc
atgatagaactgacagatcatatgaagctttgaaggaaaaacaaattgtg
gatgcttcaatccttcttagaagggggaatgaaataatcagaggaggtag
agggagagagggacctgggaaggagagagaaaggggaggaaaaaaaaaaa
aggagtgcaatatcaggagggaagtccagaagtcaggaaatgaatagaaa
aatgtagcagttggggggtggagaactgggtggagccattaaaatcctag
actcccagaaagtgagtgttctcaagaatcaaagagaccacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_36162149_36163298
seq2: B6Ng01-147F20.b_47_1186 (reverse)

seq1  TTCTTTTCCATTCAATTCACACATGCTCA-CTAAAAGACTAACCTGGAGT  49
      ||||||  ||||| ||||||| ||||||| |||||||||| |||||||||
seq2  TTCTTT--CATTCCATTCACA-ATGCTCACCTAAAAGACTTACCTGGAGT  47

seq1  ATAAGAAAGGGAATATACTA-TTTTTTTCTATTGTTTTGATTCCTATTTA  98
      || ||||   | |||||||| ||||||||||||| |||||| ||||||||
seq2  AT-AGAA---GGATATACTATTTTTTTTCTATTG-TTTGATCCCTATTTA  92

seq1  CAGTTTTTCAAGGGTTAATCTGTTTTTCATTCTTTGTTTCTGCTTTCTCC  148
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGTTTTTCAAGGGTTAATCTGTTTTTCAATCTTTGTTTCTGCTTTCTCC  142

seq1  AGTTCTTCTCTGGCTACAAGTACAATCCCCTCAGCTAAATCTGCTGAAGT  198
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGGTCTTCTCTGGCTACAAGTACAAT-CCCTCAGCTAAATCTGCTGAAGT  191

seq1  ATCATGAAGTCAAGCCATGGAAGATTGTGAAGTCAAATTTATTGTAATTT  248
      |||||||||||||||||| ||||| |||||||||||| ||||||||||||
seq2  ATCATGAAGTCAAGCCAT-GAAGAATGTGAAGTCAAA-TTATTGTAATTT  239

seq1  TGTCCTTTGATATACCAGAGTGGGGAAGAAACAATATATTCTGAGAATTG  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCC-TTGATATACCAGAGTGGGGAAGAAACAATATATTCTGAGAATTG  288

seq1  AAGTGATTTTCTCTTGTATATAGTTGCTACAGGATACAAATATCAATGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTTCTCTTGTATATAGTTGCTACAGGATACAAATATCAATGGG  338

seq1  GATGCTGTAGACTGAATTTAGGGCTGCTGCTAATCAGAAATCTCATGCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGTAGACTGAATTTAGGGCTGCTGCTAATCAGAAATCTCATGCAA  388

seq1  ACAAAACTAATCAACTGAAACTCAGCACATATGCCTCAATGATTAACTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTAATCAACTGAAACTCAGCACATATGCCTCAATGATTAACTGG  438

seq1  AACATTTTATTTCTATCTTTTATGTAAATGAGACAGGACATCTTAAGGGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTATTTCTATCTTTTATGTAAATGAGACAGGACATCTTAAGGGT  488

seq1  TTCACAGCTCACATATTAATTCAGAATATATAAAAAGTGTATTAATAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCTCACATATTAATTCAGAATATATAAAAAGTGTATTAATAAAA  538

seq1  ATGACCTAGAGGTGTAGCTCACCCAGCCTGTCTTTCAACCACACTGTGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTAGAGGTGTAGCTCACCCAGCCTGTCTTTCAACCACACTGTGAT  588

seq1  ACAAAATTTCTTTCTCCCATGATGGAAGTGTCCATAAGAACTTTCAGTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTCTTTCTCCCATGATGGAAGTGTCCATAAGAACTTTCAGTTA  638

seq1  ATTTCAGAAGTTCTTTGTTAGTGGAGAAGTATAAAATCTACTACGCTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAAGTTCTTTGTTAGTGGAGAAGTATAAAATCTACTACGCTCTT  688

seq1  ATTCTGACTGACTTTAGATCCATACCACATTGTTCGTTATTAAGCTTTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGACTGACTTTAGATCCATACCACATTGTTCGTTATTAAGCTTTAG  738

seq1  TGAACATTAGAATTGCAGCAGGTACTCCTGGTACACTTGGTCACATTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTAGAATTGCAGCAGGTACTCCTGGTACACTTGGTCACATTTCC  788

seq1  CAGGTCATTTCCACAATCAGGGTGCAGGGCTGCTTGCGAAAACATGTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATTTCCACAATCAGGGTGCAGGGCTGCTTGCGAAAACATGTCCT  838

seq1  GCAGAATAGCCTGGCCATCTTGGACTCCTGAACATTGACTTATTCTTTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATAGCCTGGCCATCTTGGACTCCTGAACATTGACTTATTCTTTTC  888

seq1  TTAATCATTCCAGTTACCCTTCCTTTCATAATCTTTACTTCCCATAACAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCATTCCAGTTACCCTTCCTTTCATAATCTTTACTTCCCATAACAA  938

seq1  CAGAGAAAGAAAGAACACTTCGTGTTATTGATTTGTTTTCAACGGTGAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAAGAAAGAACACTTCGTGTTATTGATTTGTTTTCAACGGTGAAG  988

seq1  GGTAAATCATGCTTTCATTCATTTCTCCAATTGCTTATTTGAGACTTATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATCATGCTTTCATTCATTTCTCCAATTGCTTATTTGAGACTTATT  1038

seq1  GAAAATAAACAACTCTCTAGATACCTCTTGATTGCAAAAATTAGATGTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAACAACTCTCTAGATACCTCTTGATTGCAAAAATTAGATGTTT  1088

seq1  CAAATTTACTGTATTCAAAACTGTATTAATTTTCTCTGACATCCTGGAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTACTGTATTCAAAACTGTATTAATTTTCTCTGACATCCTGGAAT  1138

seq1  TC  1150
      ||
seq2  TC  1140


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