BAC Information

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BAC

Clone NameB6Ng01-147F22
Chromosome4 (Build37)
Map Location 128,343,014 - 128,524,723
singlet/doubletdoublet
Overlap genePhc2, A3galt2, BC039093
Upstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik, Zscan20, Tlr12
Downstream geneLOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080, Sync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b, Khdrbs1, LOC100040532, Ptp4a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147F22.bB6Ng01-147F22.g
ACCDH944271DH944272
length1,0721,181
definitionDH944271|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F22, 5' end.DH944272|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,343,014 - 128,344,089)(128,523,519 - 128,524,723)
sequence
gaattccggtaagaggaaagacagtttgatgaagtacaaggacatggcat
cactctctaagaggcaagttcaggctatcatagaaagtgggagatgtcct
taggttcaggcccatgggatgagccacccatgcttagggtggggcttccc
ttagttaaacctccattgcctgtaacctgcctgtgtccaggatgaataga
agtgggtgtggatttgggccagcacctttacacgtttgtggatggcaagg
ccatgggcaccacccacccccaacccctgctagatgtcatttctttcatt
atttttattaacagttctgaagtgttggtagttgagtttttgtgtatttt
atcattcatgcctgattctattactcaggaataatgaaagtataaacttg
atcgtcacaacttggcctgtggcaatatgcctcatctccaagaaagaagc
aattaggcttttattaaattttgcaccaagtgtttaatttttcacagctt
tgctagcaacaatgttttttttttctcttacagaaaatgcttagaatcaa
accattttttgaaccatttgttttatgtgtgtgtgtagatgttcttaatc
cagtcaggttggaaatcaggattaagctattgactgtgatggaggcaccg
actcccagtttaggagttggcttgccccctagccgtggcccggagccatg
aggtcctatttgccaggagccttgagtttgagcttcccttgtcgggccct
tgtgtcttcatcattcaggacattcccacagagaatgagattcttggctt
ccttgaaacttccctttttgcccctgcttcctccaggcctcctcgccaca
cacgagactctctgggctctgcttgtcatccctcattcagtctgaaagtc
cagtcttacttcctgtttccaaagacatgcagctcacactgctgacatgt
gcactgcgtcccactttttctgcagtgcctaagacatcacagtcccaaag
gagtgacttccctgctcttcaagaaagaaatcaagatgaaatgacctttt
ctccttcatctcaaagatggga
gaattcagtaaggaggtagaaatgccaagggaaacccaaactaaagtcat
gatgtaattaaaaaacaagaaaaccctcactaacccaattagacaactca
ctcagccttaccgatgaatggatccagtagaagacgtaatatcagaactt
gaaggtaaagtaggagaattggatcacacaagcaaagaatacaaacaact
ttaaacaccaagggaatacgcaggagactgtgccgagaccaaccgtgtga
atcacagacatagataaagaagaatccagaatcaatggcacagatagaac
ttcaacaggatcacagaaaggaaaaaaaaagtctccaaattaaggagaag
cacacccatacagatacaacgccaaacagacaggaccagaagcgaatctc
cccgggaccaccaactcctcaagattgggctgcccctggcatcttttccc
tcactacacacgccggaagctgaggatgctaacagtgtactgcaggtact
tcctggatccagccacttgggtgactctgtcatctctccccaggatggcc
acacggaccccttaccatcggctttgcccctgtctgtgccccacatacca
gcgtcagtgacccttccgagatgaaggtcaagcctgcccctcctctgctg
gaagctcagtcggctgtctcatccagcttgtctggctccccagagcaagt
ggctcggtaggtagctcctgggtctactttttcaccccacctcactccag
ctgtttgttctcgccagttcctcggtgacaaagctcctgttgatgcaatc
ttcaacaccgctcttctctgctaagaagggctttcctccccaactcatgg
aagccccttactttctctcacgtctgtctgaatgctttgaaaggggaagc
cagtctagctggctttccaccaaactctgaagtcccctcactcttgattt
tctgttgtcagaccaagcgtctcacatgatttgtcttcccccggctgcac
cgaggttctgtgagcaggacatgttctgtcacgggcatccagagcgctgt
atagtcactacaggtgaattgacggatccagtcagctgcctctcctcctg
gaatctttatcttgcttctgaatctcggacccatgttcagagtgccctag
gatagggtttgctcctagactgtgacctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128343014_128344089
seq2: B6Ng01-147F22.b_47_1118

seq1  GAATTCCGGTAAGAGGAAAGACAGTTTGATGAAGTACAAGGACATGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGGTAAGAGGAAAGACAGTTTGATGAAGTACAAGGACATGGCAT  50

seq1  CACTCTCTAAGAGGCAAGTTCAGGCTATCATAGAAAGTGGGAGATGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCTAAGAGGCAAGTTCAGGCTATCATAGAAAGTGGGAGATGTCCT  100

seq1  TAGGTTCAGGCCCATGGGATGAGCCACCCATGCTTAGGGTGGGGCTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCAGGCCCATGGGATGAGCCACCCATGCTTAGGGTGGGGCTTCCC  150

seq1  TTAGTTAAACCTCCATTGCCTGTAACCTGCCTGTGTCCAGGATGAATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAAACCTCCATTGCCTGTAACCTGCCTGTGTCCAGGATGAATAGA  200

seq1  AGTGGGTGTGGATTTGGGCCAGCACCTTTACACGTTTGTGGATGGCAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGTGGATTTGGGCCAGCACCTTTACACGTTTGTGGATGGCAAGG  250

seq1  CCATGGGCACCACCCACCCCCAACCCCTGCTAGATGTCATTTCTTTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGCACCACCCACCCCCAACCCCTGCTAGATGTCATTTCTTTCATT  300

seq1  ATTTTTATTAACAGTTCTGAAGTGTTGGTAGTTGAGTTTTTGTGTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTAACAGTTCTGAAGTGTTGGTAGTTGAGTTTTTGTGTATTTT  350

seq1  ATCATTCATGCCTGATTCTATTACTCAGGAATAATGAAAGTATAAACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCATGCCTGATTCTATTACTCAGGAATAATGAAAGTATAAACTTG  400

seq1  ATCGTCACAACTTGGCCTGTGGCAATATGCCTCATCTCCAAGAAAGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTCACAACTTGGCCTGTGGCAATATGCCTCATCTCCAAGAAAGAAGC  450

seq1  AATTAGGCTTTTATTAAATTTTGCACCAAGTGTTTAATTTTTCACAGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGCTTTTATTAAATTTTGCACCAAGTGTTTAATTTTTCACAGCTT  500

seq1  TGCTAGCAACAATGTTTTTTTTTTCTCTTACAGAAAATGCTTAGAATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCAACAATGTTTTTTTTTTCTCTTACAGAAAATGCTTAGAATCAA  550

seq1  ACCATTTTTTGAACCATTTGTTTTATGTGTGTGTGTAGATGTTCTTAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTTTGAACCATTTGTTTTATGTGTGTGTGTAGATGTTCTTAATC  600

seq1  CAGTCAGGTTGGAAATCAGGATTAAGCTATTGACTGTGATGGAGGCACCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGGTTGGAAATCAGGATTAAGCTATTGACTGTGATGGAGGCACCG  650

seq1  ACTCCCAGTTTAGGAGTTGGCTGGCCCCCTAGCCGTGGCCCGGAGCCATG  700
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACTCCCAGTTTAGGAGTTGGCTTGCCCCCTAGCCGTGGCCCGGAGCCATG  700

seq1  AGGTCCTATTTGCCAGGAGCCTTGAGTTTGAGCTTCCCTTGTCGGGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTATTTGCCAGGAGCCTTGAGTTTGAGCTTCCCTTGTCGGGCCCT  750

seq1  TGTGTCTTCATCATTCAGGACATTCCCACAGAGAATGAGATTCTTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTCATCATTCAGGACATTCCCACAGAGAATGAGATTCTTGGCTT  800

seq1  CCTTGAAACTTCCC-TTTTGCCCCTGCTTCCTCCAGGCCTCCTCGCCACA  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTTGAAACTTCCCTTTTTGCCCCTGCTTCCTCCAGGCCTCCTCGCCACA  850

seq1  CACGAGACTCTCTGGGCTCTGCTTGTCATCCCTCATTCAGTCTGAAAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGACTCTCTGGGCTCTGCTTGTCATCCCTCATTCAGTCTGAAAGTC  900

seq1  CAGTCTTACTTCCTGTTTCCCAAGGACATGCAGCTCACAACTGCTGACAT  949
      |||||||||||||||||| |||| |||||||||||||| |||||||||||
seq2  CAGTCTTACTTCCTGTTT-CCAAAGACATGCAGCTCAC-ACTGCTGACAT  948

seq1  GTGCACTGCGCTCCCACTTTTTCTGCAGTGCCTAAGACATCACAGTCCCC  999
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  GTGCACTGCG-TCCCACTTTTTCTGCAGTGCCTAAGACATCACAGT-CCC  996

seq1  AAAGGAGTGACTTCCCTGCTCCTACAAAGAAAGAAATCAAAGATGAGATG  1049
      ||||||||||||||||||||| |   |||||||||||| ||||||| |||
seq2  AAAGGAGTGACTTCCCTGCTCTT--CAAGAAAGAAATC-AAGATGAAATG  1043

seq1  ACC-TTTCTACTTCATC-CTAAGATGGGA  1076
      ||| ||||| ||||||| | |||||||||
seq2  ACCTTTTCTCCTTCATCTCAAAGATGGGA  1072

seq1: chr4_128523519_128524723
seq2: B6Ng01-147F22.g_68_1248 (reverse)

seq1  ATCAGGTCACAAGTCTTGGCAGCAAACACCTTTACCCTCTGCGGCATCTT  50
      |||||||||| ||||| || ||||||| ||| |     ||  ||||   |
seq2  ATCAGGTCAC-AGTCTAGG-AGCAAAC-CCTAT----CCTAGGGCACTCT  43

seq1  GACCACTGGGTTACAGAGAATTTAGAAGACAAGATAAAGATGTCAGGAGG  100
      || || |||||  | ||| ||| ||||| ||||||||||||  |||||||
seq2  GAACA-TGGGT--CCGAG-ATTCAGAAG-CAAGATAAAGATTCCAGGAGG  88

seq1  AGGAGGCAGCTGACTGGAATCTGTCCATTCACCCTGTAGGTGACTATTAC  150
      | ||||||||||||||| ||| ||| ||||| |||||| ||||||| |||
seq2  A-GAGGCAGCTGACTGG-ATCCGTCAATTCA-CCTGTA-GTGACTA-TAC  133

seq1  AGCGCCTCTGGATGCCCGTGACAG-ACATGTTCCTGGCCTCACAGAACCT  199
      |||| ||||||||||||||||||| ||||| |||||  ||||||||||||
seq2  AGCG-CTCTGGATGCCCGTGACAGAACATG-TCCTG--CTCACAGAACCT  179

seq1  CTGTGCAGCCGGGGGAAGACAAATCATTGTGAGACGCTTTGGTCTGACAA  249
      | |||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  CGGTGCAGCCGGGGGAAGACAAATCA-TGTGAGACGC-TTGGTCTGACAA  227

seq1  CAGAAAAATCAAGAGTTGAGGGGACTTCAGAGTTTGGTGGAAAGCCAGCT  299
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAG-AAAATCAAGAG-TGAGGGGACTTCAGAGTTTGGTGGAAAGCCAGCT  275

seq1  AGACTGGCTTCCCCTTTCAAAGCATTCAGACAGACGTGAGAGAAAGTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGCTTCCCCTTTCAAAGCATTCAGACAGACGTGAGAGAAAGTAAG  325

seq1  GGGCTTCCATGAGTTGGGGAGGAAAGCCCTTCTTAGCAGAGAAGAGCGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCCATGAGTTGGGGAGGAAAGCCCTTCTTAGCAGAGAAGAGCGGT  375

seq1  GTTGAAGATTGCATCAACAGGAGCTTTGTCACCGAGGAACTGGCGAGAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGATTGCATCAACAGGAGCTTTGTCACCGAGGAACTGGCGAGAAC  425

seq1  AAACAGCTGGAGTGAGGTGGGGTGAAAAAGTAGACCCAGGAGCTACCTAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTGGAGTGAGGTGGGGTGAAAAAGTAGACCCAGGAGCTACCTAC  475

seq1  CGAGCCACTTGCTCTGGGGAGCCAGACAAGCTGGATGAGACAGCCGACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCACTTGCTCTGGGGAGCCAGACAAGCTGGATGAGACAGCCGACTG  525

seq1  AGCTTCCAGCAGAGGAGGGGCAGGCTTGACCTTCATCTCGGAAGGGTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAGCAGAGGAGGGGCAGGCTTGACCTTCATCTCGGAAGGGTCAC  575

seq1  TGACGCTGGTATGTGGGGCACAGACAGGGGCAAAGCCGATGGTAAGGGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCTGGTATGTGGGGCACAGACAGGGGCAAAGCCGATGGTAAGGGGT  625

seq1  CCGTGTGGCCATCCTGGGGAGAGATGACAGAGTCACCCAAGTGGCTGGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTGGCCATCCTGGGGAGAGATGACAGAGTCACCCAAGTGGCTGGAT  675

seq1  CCAGGAAGTACCTGCAGTACACTGTTAGCATCCTCAGCTTCCGGCGTGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGTACCTGCAGTACACTGTTAGCATCCTCAGCTTCCGGCGTGTG  725

seq1  TAGTGAGGGAAAAGATGCCAGGGGCAGCCCAATCTTGAGGAGTTGGTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGGAAAAGATGCCAGGGGCAGCCCAATCTTGAGGAGTTGGTGGT  775

seq1  CCCGGGGAGATTCGCTTCTGGTCCTGTCTGTTTGGCGTTGTATCTGTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGGAGATTCGCTTCTGGTCCTGTCTGTTTGGCGTTGTATCTGTATG  825

seq1  GGTGTGCTTCTCCTTAATTTGGAGACTTTTTTTTTCCTTTCTGTGATCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCTTCTCCTTAATTTGGAGACTTTTTTTTTCCTTTCTGTGATCCT  875

seq1  GTTGAAGTTCTATCTGTGCCATTGATTCTGGATTCTTCTTTATCTATGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGTTCTATCTGTGCCATTGATTCTGGATTCTTCTTTATCTATGTC  925

seq1  TGTGATTCACACGGTTGGTCTCGGCACAGTCTCCTGCGTATTCCCTTGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTCACACGGTTGGTCTCGGCACAGTCTCCTGCGTATTCCCTTGGT  975

seq1  GTTTAAAGTTGTTTGTATTCTTTGCTTGTGTGATCCAATTCTCCTACTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGTTGTTTGTATTCTTTGCTTGTGTGATCCAATTCTCCTACTTT  1025

seq1  ACCTTCAAGTTCTGATATTACGTCTTCTACTGGATCCATTCATCGGTAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAGTTCTGATATTACGTCTTCTACTGGATCCATTCATCGGTAAG  1075

seq1  GCTGAGTGAGTTGTCTAATTGGGTTAGTGAGGGTTTTCTTGTTTTTTAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGAGTTGTCTAATTGGGTTAGTGAGGGTTTTCTTGTTTTTTAAT  1125

seq1  TACATCATGACTTTAGTTTGGGTTTCCCTTGGCATTTCTACCTCCTTACT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATGACTTTAGTTTGGGTTTCCCTTGGCATTTCTACCTCCTTACT  1175

seq1  GAATTC  1205
      ||||||
seq2  GAATTC  1181