BAC Information

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BAC

Clone NameB6Ng01-147M15
Chromosome4 (Build37)
Map Location 59,008,598 - 59,204,603
singlet/doubletdoublet
Overlap gene2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg
Upstream geneTxndc8, Svep1, Musk, Edg2, LOC675306, LOC433711, Olfr267, AI314180, LOC100041581, Ltb4dh
Downstream geneLOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846, Mup2, LOC620882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147M15.bB6Ng01-147M15.g
ACCDH944570DH944571
length1,0871,054
definitionDH944570|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M15, 5' end.DH944571|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,203,508 - 59,204,603)(59,008,598 - 59,009,656)
sequence
gaattcatcacagagcaggggcatggtgacgcacgcctttaatcccagca
ctccagaggcagaggcaggcggatttctgagttcgaggccagcctggtct
acaaagtgagttccaggacagccagggctatacagagaaaacctgtctcg
agggaaaaaaaaaaaaagaattcatcacaggaactagcaatatatcttag
ggatgaagcacttgcccaaaatacagaaggccctgggtttggttcccagc
acaggaaaaagctaagaaatacaaatataactgtttctttttaagtgttg
cttaaatcaactgaattgcctaccaaaaacaataaatgaatattaaaagc
tcagaagccaaaatgccatgcatcttcctacactaatggagagagctcac
acatttgttgataggagaaaaacaatagtcaggttgctttgcaggcagct
cccgacaagcaacagccttggggtgtttggttcttcatgcttaacttcta
gcacctagaacagtgccctgtactgcttatcaaacaccatttagtcagta
ggggagattttaaagcaggccatggaacaacagtcatgacatggtacaat
ctcctctctcctcttctgcctgatatatatatacctaattgggaaggtag
gcaaaaatggttaacaaggtaacgttttagtatgttataactatcttctt
tattcctttctgtactgtctaaattcctgataaaataactattgcttttt
aaagagcccatgtagttaaaatgaatactgcttacatttctaaatttcca
aacggggtatgttttctttcactttcaaaaaaaaccccacaaaaccctgt
ctgctttatcttatacaggtgttgtctttctcggcgtcaggaaatggcac
accaatcggagaaaagcacatgttttctatattgaaaaaaaagtaattgc
ctaacgtccttccctgtttttcatacatacagcctattctagcctatccc
taatctgtagtttaaatagtaataataataaaataaatttctccctcctc
ttcaggcaaaatgcaagtgagtcatctctacacctta
gaattccacatgctttctcccacctgggttctgctttcgcttctgctctc
agcagctgatctggaccttgtgcttcatgagcacatcaaagccgtggatc
aaaaatctcagcttttaatgatcgagatcacaaacttctttgcacctgtg
tccatctttctgccactgataacaggaggctgctctcctgaaaggactgc
gtcttcatcttctaatttcactgggctacttccggtattccttctctctt
gcaaagcaagaatcggttttgattctgtatgaagctaaggggctctacac
aagaaaatggaatatttcccacttctaaaactatgggccacacttcgtat
taagaggaaccatcttagccgggcgtggtggcgcacgcctttaatcccag
cactcgggaggcagaggcaggcagatttctgagttcgcggccagcctggt
ctacagagtgagttccaggacagccagggctatacagagaaaccctgtct
caaaattccccccaaccccccccaaaaaagaggagccatctttgtcaagg
aaaagcttgctaaacccgacatatagagtcaaagctgaagtttctttaga
aatgaatattggcagatccaaggcatcaaagaaggaagtgaactactttg
agagaacctggatggagttccctagtttcacccaaaagggaagaagggaa
ctgctgaggtggctcagtgggtaaaggtgcttgctgccaagccttgccat
cctggcttggacccctgttacccatgggtataggaagagaactgactccc
gcaggttgtcctctgaccttaacacacaacagaaataagggtaaccattc
ttttaagagaagagactataattcccttgataattagaaaagtcatttaa
attatttctaatattgggatgattcagctgtccgtgaaactggtgaaggg
ctaaactcatcaccagcgttacctcagacaatcggaactccacagataaa
aacagctagaggaatagaggatgtattacttggtttagtgatctaccctt
ttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_59203508_59204603
seq2: B6Ng01-147M15.b_50_1132 (reverse)

seq1  GTGTAGAGATGAACTCACTTGGCATTTTAGCCTGAAAGAGGAGGGAGGAA  50
      ||||||||||| |||||||| ||||||| ||||| ||||||||||| |||
seq2  GTGTAGAGATG-ACTCACTT-GCATTTT-GCCTG-AAGAGGAGGGA-GAA  45

seq1  ATTTATTTTTATTTATTTATTTATTTATTTTAAACTACCAGA-TAGGGAT  99
      |||||||||   |||||   ||| |   ||||||||| |||| |||||||
seq2  ATTTATTTT--ATTATT--ATTACT--ATTTAAACTA-CAGATTAGGGAT  88

seq1  AGGCTAGAATAGGCTGTATGTTAATGAAAAACAGGGAAGGACGTTAGGCA  149
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  AGGCTAGAATAGGCTGTATGT--ATGAAAAACAGGGAAGGACGTTAGGCA  136

seq1  GTTACTTTTTTTTTCCACTATAGAAAACATGTGCTTTTCTCCGATTGGTG  199
       ||||||||||||  || ||||||||||||||||||||||||||||||||
seq2  ATTACTTTTTTTT--CAATATAGAAAACATGTGCTTTTCTCCGATTGGTG  184

seq1  TGCCATTTCCTGACGCCGAGAAAGACAACACCTGTATAAGAT-AAGCAGA  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGCCATTTCCTGACGCCGAGAAAGACAACACCTGTATAAGATAAAGCAGA  234

seq1  CAGGGTTTTGTGGGGTTTTTTTTGAAAGTGAAAGAAAACATACCCCGTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTTGTGGGGTTTTTTTTGAAAGTGAAAGAAAACATACCCCGTTT  284

seq1  GG-AATTTAGAAATGTAAGCAGTATTCATTTTAACTACATGGGCTCTTTA  347
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTAGAAATGTAAGCAGTATTCATTTTAACTACATGGGCTCTTTA  334

seq1  AAAAGCAATAGTTATTTTATCAGGAATTTAGACAGTACAGAAAGGAATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATAGTTATTTTATCAGGAATTTAGACAGTACAGAAAGGAATAA  384

seq1  AGAAGATAGTTATAACATACTAAAACGTTACCTTGTTAACCATTTTTGCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATAGTTATAACATACTAAAACGTTACCTTGTTAACCATTTTTGCC  434

seq1  TACCTTCCCAATTAGGTATATATATATCAGGCAGAAGAGGAGAGAGGAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCCAATTAGGTATATATATATCAGGCAGAAGAGGAGAGAGGAGA  484

seq1  TTGTACCATGTCATGACTGTTGTTCCATGGCCTGCTTTAAAATCTCCCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCATGTCATGACTGTTGTTCCATGGCCTGCTTTAAAATCTCCCCT  534

seq1  ACTGACTAAATGGTGTTTGATAAGCAGTACAGGGCACTGTTCTAGGTGCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTAAATGGTGTTTGATAAGCAGTACAGGGCACTGTTCTAGGTGCT  584

seq1  AGAAGTTAAGCATGAAGAACCAAACACCCCAAGGCTGTTGCTTGTCGGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTAAGCATGAAGAACCAAACACCCCAAGGCTGTTGCTTGTCGGGA  634

seq1  GCTGCCTGCAAAGCAACCTGACTATTGTTTTTCTCCTATCAACAAATGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTGCAAAGCAACCTGACTATTGTTTTTCTCCTATCAACAAATGTG  684

seq1  TGAGCTCTCTCCATTAGTGTAGGAAGATGCATGGCATTTTGGCTTCTGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTCTCCATTAGTGTAGGAAGATGCATGGCATTTTGGCTTCTGAG  734

seq1  CTTTTAATATTCATTTATTGTTTTTGGTAGGCAATTCAGTTGATTTAAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATATTCATTTATTGTTTTTGGTAGGCAATTCAGTTGATTTAAGC  784

seq1  AACACTTAAAAAGAAACAGTTATATTTGTATTTCTTAGCTTTTTCCTGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTAAAAAGAAACAGTTATATTTGTATTTCTTAGCTTTTTCCTGTG  834

seq1  CTGGGAACCAAACCCAGGGCCTTCTGTATTTTGGGCAAGTGCTTCATCCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAACCAAACCCAGGGCCTTCTGTATTTTGGGCAAGTGCTTCATCCC  884

seq1  TAAGATATATTGCTAGTTCCTGTGATGAATTCTTTTTTTTTTTTTCCCTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATATTGCTAGTTCCTGTGATGAATTCTTTTTTTTTTTTTCCCTC  934

seq1  GAGACAGGTTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGTTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTA  984

seq1  GACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCTGGAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCTGGAGT  1034

seq1  GCTGGGATTAAAGGCGTGCGTCACCATGCCCCTGCTCTGTGATGAATTC  1096
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTAAAGGCGTGCGTCACCATGCCCCTGCTCTGTGATGAATTC  1083

seq1: chr4_59008598_59009656
seq2: B6Ng01-147M15.g_71_1124

seq1  GAATTCCACATGCTTTCTCCCACCTGGGTTCTGCTTTCGCTTCTGCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATGCTTTCTCCCACCTGGGTTCTGCTTTCGCTTCTGCTCTC  50

seq1  AGCAGCTGATCTGGACCTTGTGCTTCATGAGCACATCAAAGCCGTGGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTGATCTGGACCTTGTGCTTCATGAGCACATCAAAGCCGTGGATC  100

seq1  AAAAATCTCAGCTTTTAATGATCGAGATCACAAACTTCTTTGCACCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTCAGCTTTTAATGATCGAGATCACAAACTTCTTTGCACCTGTG  150

seq1  TCCATCTTTCTGCCACTGATAACAGGAGGCTGCTCTCCTGAAAGGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTTTCTGCCACTGATAACAGGAGGCTGCTCTCCTGAAAGGACTGC  200

seq1  GTCTTCATCTTCTAATTTCACTGGGCTACTTCCGGTATTCCTTCTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATCTTCTAATTTCACTGGGCTACTTCCGGTATTCCTTCTCTCTT  250

seq1  GCAAAGCAAGAATCGGTTTTGATTCTGTATGAAGCTAAGGGGCTCTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCAAGAATCGGTTTTGATTCTGTATGAAGCTAAGGGGCTCTACAC  300

seq1  AAGAAAATGGAATATTTCCCACTTCTAAAACTATGGGCCACACTTCGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGGAATATTTCCCACTTCTAAAACTATGGGCCACACTTCGTAT  350

seq1  TAAGAGGAACCATCTTAGCCGGGCGTGGTGGCGCACGCCTTTAATCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGAACCATCTTAGCCGGGCGTGGTGGCGCACGCCTTTAATCCCAG  400

seq1  CACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGCGGCCAGCCTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGCGGCCAGCCTGGT  450

seq1  CTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCT  500

seq1  CAAAATTCCCCCCAACCCCCCCCAAAAAAGAGGAGCCATCTTTGTCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCCCCCCAACCCCCCCCAAAAAAGAGGAGCCATCTTTGTCAAGG  550

seq1  AAAAGCTTGCTAAACCCGACATATAGAGTCAAAGCTGAAGTTTCTTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGCTAAACCCGACATATAGAGTCAAAGCTGAAGTTTCTTTAGA  600

seq1  AATGAATATTGGCAGATCCAAGGCATCAAAGAAGGAAGTGAACTACTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATATTGGCAGATCCAAGGCATCAAAGAAGGAAGTGAACTACTTTG  650

seq1  AGAGAACCTGGATGGAGTTCCCTAG-TTCACCCAAAAGGGAAGAAGGGAA  699
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAGAACCTGGATGGAGTTCCCTAGTTTCACCCAAAAGGGAAGAAGGGAA  700

seq1  CTGCTGAGGTGGCTCAGTGGGTAAAGGTGCTTGCTGCCAAGCC-TGCCAT  748
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCTGAGGTGGCTCAGTGGGTAAAGGTGCTTGCTGCCAAGCCTTGCCAT  750

seq1  CCTGGCTTGGACCCCTGTGACCCATGGGTATAGGAAGAGAACTGACTCCC  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTGGCTTGGACCCCTGTTACCCATGGGTATAGGAAGAGAACTGACTCCC  800

seq1  GCAGGTTGTCCTCTGACCTTAACACACAACAGAAATAAGGGTAACCATTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTGTCCTCTGACCTTAACACACAACAGAAATAAGGGTAACCATTC  850

seq1  TTTTAAAGAGAAGAGACTATAATT-CCTTGATAATTAGAAAAGTCATTTT  897
      |||| ||||||||||||||||||| ||||||||||||||||||||| |||
seq2  TTTT-AAGAGAAGAGACTATAATTCCCTTGATAATTAGAAAAGTCA-TTT  898

seq1  AAATTATTTCTAAATATTGGGATGATTCAGCTGTCCGTGGAAACTGGTGA  947
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  AAATTATTTCT-AATATTGGGATGATTCAGCTGTCCGT-GAAACTGGTGA  946

seq1  AGGGGCTAAACTCATCA-CAGCGTTACCTCAGGACAAATCGGAACCCCAC  996
      | ||||||||||||||| ||||||||||||| ||| ||||||||| ||||
seq2  A-GGGCTAAACTCATCACCAGCGTTACCTCA-GAC-AATCGGAACTCCAC  993

seq1  AGATAAAAACAGCTAGAGGAATAGAGGAGTGTATTACCTGGTTTAGTGAT  1046
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  AGATAAAAACAGCTAGAGGAATAGAGGA-TGTATTACTTGGTTTAGTGAT  1042

seq1  GCACACCTTTTAT  1059
        || ||||||||
seq2  CTAC-CCTTTTAT  1054