BAC Information

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BAC

Clone NameB6Ng01-148C16
Chromosome4 (Build37)
Map Location 91,879,231 - 91,880,376
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148C16.bB6Ng01-148C16.g
ACCDH944850DH944851
length1,1411,208
definitionDH944850|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C16, 5' end.DH944851|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaaattatatcagtgattattaagctcttttatagtgggatt
gctattaggtcattttctgatagtcaaaactgcaatgagaattctgccag
tgtttcaagtatcactagttaattgctcttagatagtaaccagactttct
cctactcagaacacattccaagaggttgtaaaacaattaaccaaagatca
taaaaaaggaactaatgatttactgtaggtgctagggcagaagataaaat
attactgggtttatctatacaaaacttaactaataacttagttatggttt
taaaccttcagtcaacctgtggagctgagacacatgattggacgtttagc
caaataattacacctaatggatatgcatgtaaacattctcggttgtaaac
ttctatttcaatttgtgatttgatttttttgtgtgaacttgtggtgaact
ttgtaacatgtgatcatgtattctgaaagatgtataaatactgagaacaa
agagaaggagtagaattttttttttccctttcccctcctggaagaatctt
ttcccgtactagaatttttgcccacttagagaacttttatccttccctgc
ttaggatctttctgcctttccccttagttagctttcataggaaacttttt
acaacctagtaataaatgctctaatcattttttcagtgtccctttttctt
cctgtgacttccaactagcaggctgaaagttagagctgagcagctcctgc
tgagatagtacaaagactatttacttaatcctttgctgtttgaggaagat
gtcctaagtgcatcacagaagacaggtcacctacagtagcatataactta
gactcagataagtaaactctttattattatacagcaacccaaaatatctg
gtaagactaagtcttacccctgaatcttaagacaaagtcttaccctccct
attctcttcctctctgctactcagaagatccacaagaaagaagaaaacac
tgggaaacactgctgggatgtgtgaagttaagcagacttataaaaatgca
taattggaagaatttcgtcatgttatcatcatatgtaaagaaatgcaagc
taccactcgacaagtgctggcgaatcaaggtgttcacctca
gaattctaattggtgcctacatatacagtcattgcccctactttctagta
tcttggatatgggaaggtactctgcagctcacaaaaagagaaatgtaaac
cccagcccacgtgcaaaactcttgatctacaatgttgacctgcctgcaaa
attgactttgcaatatgaagtaaacaactaacatctaattgacataaggg
ctctccaggaagtggaatccacacccaacactgctttgttggccaagaaa
ctcagcctagatagcccagagacctaggatagaactaaatactactagac
tagggaaaaaaaaatccctttcttctgagctcaaccttgtaggagagaag
acagagtccaagagtcagatgaagtggagaacgtcaggaaaaaagtcctc
taagtcaattgaacaaaactcatatgaactcaaaaagcctgaagcaacaa
gagtagggcctgcagaggttgcactaggtcttcattgtatatactatagc
tatcagtttggtgtttttatggaaattctaattagatgaaggtgtgtgtc
tctgattcttatgccttttcttggtcacttttcttccttgtttaactttt
ccaatttcaataacatggtttttgtttaatcttgttttattgtaattatg
ttttatggttatctcttagaagcctattcttttttgatgggggtcagaaa
gatggtgttttcagaaggctacgaaagatgggaagaacttggaaaagtat
caagaggggaaatctgaaaataatctattttacttttttttaatttaatt
tattttattttatttaatttattcttttagcatcctaaaacaatcctcca
ttcactccttccagttcgcccttccccagatccactactcctccatttcc
cttaagaaataagcaggtctaccagctttatcactaaatacagcataaca
gatataattaagtctaggcacaaaccctcatttcaagcagaacaagacaa
cccagtagagaaaaggtcccagcacagaccaaacagtaagagacaaccac
ctctcacaggttaggagtccccacaaaatactcaaataacctatttcatt
taaggggaaatgttgagctgcgagccaatgccaatcaattggcttgctct
tagtaatgaggactgtaggcaacattgtcatctgcaatttggtttcctga
ttgagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91879231_91880376
seq2: B6Ng01-148C16.b_66_1186

seq1  GTGATTATTAAGCTCTTTTATAGTGGGATTGCTATTAGGTCATTTTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTATTAAGCTCTTTTATAGTGGGATTGCTATTAGGTCATTTTCTGA  50

seq1  TAGTCAAAACTGCAATGAGAATTCTGCCAGTGTTTCAAGTATCACTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAAACTGCAATGAGAATTCTGCCAGTGTTTCAAGTATCACTAGTT  100

seq1  AATTGCTCTTAGATAGTAACCAGACTTTCTCCTACTCAGAACACATTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTCTTAGATAGTAACCAGACTTTCTCCTACTCAGAACACATTCCA  150

seq1  AGAGGTTGTAAAACAATTAACCAAAGATCATAAAAAAGGAACTAATGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTGTAAAACAATTAACCAAAGATCATAAAAAAGGAACTAATGATT  200

seq1  TACTGTAGGTGCTAGGGCAGAAGATAAAATATTACTGGGTTTATCTATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAGGTGCTAGGGCAGAAGATAAAATATTACTGGGTTTATCTATAC  250

seq1  AAAACTTAACTAATAACTTAGTTATGGTTTTAAACCTTCAGTCAACCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTAACTAATAACTTAGTTATGGTTTTAAACCTTCAGTCAACCTGT  300

seq1  GGAGCTGAGACACATGATTGGACGTTTAGCCAAATAATTACACCTAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAGACACATGATTGGACGTTTAGCCAAATAATTACACCTAATGG  350

seq1  ATATGCATGTAAACATTCTCGGTTGTAAACTTCTATTTCAATTTGTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATGTAAACATTCTCGGTTGTAAACTTCTATTTCAATTTGTGATT  400

seq1  TGATTTTTTTGTGTGAACTTGTGGTGAACTTTGTAACATGTGATCATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTGTGTGAACTTGTGGTGAACTTTGTAACATGTGATCATGTA  450

seq1  TTCTGAAAGATGTATAAATACTGAGAACAAAGAGAAGGAGTAGAATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGATGTATAAATACTGAGAACAAAGAGAAGGAGTAGAATTTTT  500

seq1  TTTTTCCCTTTCCCCTCCTGGAAGAATCTTTTCCCGTACTAGAATTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTTTCCCCTCCTGGAAGAATCTTTTCCCGTACTAGAATTTTTG  550

seq1  CCCACTTAGAGAACTTTTATCCTTCCCTGCTTAGGATCTTTCTGCCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTAGAGAACTTTTATCCTTCCCTGCTTAGGATCTTTCTGCCTTTC  600

seq1  CCCTTAGTTAGCTTTCATAGGAAACTTTTTACAACCTAGTAATAAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAGTTAGCTTTCATAGGAAACTTTTTACAACCTAGTAATAAATGCT  650

seq1  CTAATCATTTTTTCAGTGTCCCTTTTTCTTCCTGTGACTTCCAACTAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATTTTTTCAGTGTCCCTTTTTCTTCCTGTGACTTCCAACTAGCA  700

seq1  GGCTGAAAGTTAGAGCTGAGCAGCTCCTGCTGAGATAGTACAAAGACTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAAGTTAGAGCTGAGCAGCTCCTGCTGAGATAGTACAAAGACTAT  750

seq1  TTACTTAATCCTTTGCTGTTTGAGGAAGATGTCCTAAGTGCATCACAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATCCTTTGCTGTTTGAGGAAGATGTCCTAAGTGCATCACAGAA  800

seq1  GACAGGTCACCTACAGTAGCATATAACTTAGACTCAGATAAGTAAACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTCACCTACAGTAGCATATAACTTAGACTCAGATAAGTAAACTCT  850

seq1  TTATTATTATACAGCAACCCAAAATATCTGGTAAGACTAAGTCTTACCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATACAGCAACCCAAAATATCTGGTAAGACTAAGTCTTACCCC  900

seq1  TGAATCTTAAGACAAAGTCTTACCCTCCCTATTCTCTTCCTCCTCTGCTA  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAATCTTAAGACAAAGTCTTACCCTCCCTATTCTCTTCCT-CTCTGCTA  949

seq1  CCTCAAGAAGGATCCACAAGAAAGAAGAAAACACTGGGAAAACACTGCTG  1000
       ||| |||| |||||||||||||||||||||||||||| |||||||||||
seq2  -CTC-AGAA-GATCCACAAGAAAGAAGAAAACACTGGG-AAACACTGCTG  995

seq1  GGAATTGTGTGAAAGTAAGGCAGACATTAT-AAAATGCAATAATTGGGAA  1049
      |||  |||||| |||| | |||||| |||| ||||||| |||||| ||||
seq2  GGA--TGTGTG-AAGTTAAGCAGAC-TTATAAAAATGC-ATAATT-GGAA  1039

seq1  GATATTTCGTTCATGTTTTAATCATCATAATGTAAAGAAATGCAAAAGCA  1099
      || |||||| |||||||   |||||||| ||||||||||||||  |||| 
seq2  GA-ATTTCG-TCATGTT---ATCATCAT-ATGTAAAGAAATGC--AAGC-  1080

seq1  TAACCACTCAGACAAGTGCTTGTCGAATCCAAAGTTTGTTCACCTCA  1146
        ||||||| ||||||||| || ||||||  |||  |||||||||||
seq2  -TACCACTC-GACAAGTGC-TGGCGAATC--AAG-GTGTTCACCTCA  1121