BAC Information

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BAC

Clone NameB6Ng01-148D05
Chromosome4 (Build37)
Map Location 103,955,600 - 104,140,420
singlet/doubletdoublet
Overlap geneDab1
Upstream gene4921539E11Rik, 4930456L15Rik, Oma1, LOC665451, LOC100039940, EG665460, LOC622315
Downstream geneC8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b, LOC433742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148D05.bB6Ng01-148D05.g
ACCDH944876DH944877
length1,1481,085
definitionDH944876|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D05, 5' end.DH944877|Mus musculus domesticus DNA, BAC clone: B6Ng01-148D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,955,600 - 103,956,748)(104,139,321 - 104,140,420)
sequence
gaattctctggaattcgatcactaaccactgctggttccaaggaggtgat
gaagaccatgatggtgacctagcactgtatcattacctccctgtggcatt
tcaggagaactctaagtcacctgttataatcaatgccaagaggttcttct
ccctgtaaatcaaacacaagttaatggatattttaattacctcaacttac
ccattgcacatgcatatttcaaaatatgttgcttaccactgataggcacg
aattcattcgccaagtgaaaactcaaccatattgcccttaatgtgcaata
cagatctacctgtgggttagatagtaacatgtttgatggagagaaaacaa
caaagagagaaggtatgtgaggggactgaggctggaggctttgggggagg
gcctcagtggggaggtgatagggcataagactgtgaagcggggaatgacg
gggataaacagaatttagggaatgagatggccgggcaaaggaaacagact
gtaggaaggttctaaactacaggctgcctgaacacggaggaatagccaag
tagcaagtgtaagaccttcttaatgtgaatgcaaactagaaaggcataac
attataaccaataaaccagcactgacatctgagctcagtggctaaacttg
gttacatcattatgtcagccatgcagcctcaatcttttctataaaatggg
aacaccgattttcctgtcaggagcacgggagactatataatgataggcct
aacatggaaatggcagatggagccctgaccaatgctggccatgcagttct
accctaagcattctcctggagagcctcggtttgcgccttctggagaaatg
gaccacacaccaccaggcagaagcctgcagactccgtgcctcctgatacc
tatcctaatgatgatgtgcacctcacacctgcaccaagcttcccagttac
cttcccatttgctttcagcagtccacgtgaacgctggagtccaggagatg
cttccggcatgactggtgccacaggctgccagatggagaacaactttgcg
cttgagcaacaaacaaagccaaacagttccaagttgtaggcttttgtttt
gtgtgagcaaggacatgaaccaacaaccggcttggtcagtttgaagca
gaattccaataagcatccaggaggcttaagggtggacagagaggcggaca
atgagacagagacagcccacacatgccaatctctgagatccaatggagaa
agttggagaagagaagtgagtgaccaagagggacacggaaaagacatctg
tttaacatcccggttcagacccccagaagaacatgctgccctgctctcta
gtcttcaaaagcctaaggaaccaaccccacacctatgtgcttgggatgta
gctcagagaggaaaggagatgctggcagggaggcagactgacactccaag
tgccttctctgggctatggtttgctctaagcatgacttaactccttgaat
ctttgcttaccctggaagctgttatgagacccattttgcagcaggagaga
ctaaaggcaaaaactgatgggacacccagtcctagacactatttctctga
tagaatctaagcacacccaagaatacctggcttagtgtataagtatcatc
gttcccaccaaatcagcccgccttgcatcagctgtcagctgtacctacct
gtatctcgtcccacagtgagcctgagggccacccgagggcacagatggtc
acctatttcccttgcattttcttctacacctgtcttaataagatgcaaga
aactcccccatatatattaactgaataaataaagctgtgaaatctttcaa
ctccctacaatactatttttttctcagtttaaaaataacctgctttgcca
aacactcaaacatcttttctctcttacaacagaccgatgttgtgctgttt
tttgttttgttttttgtttttttttttttacacacatatcatattgagat
tcacaactcatcactcccacaaaaaatccccctaggctccttgtctattc
aggcaagtgcttgcctggtaaatttggagaatggttcagattaatttctg
cctgctgagaatgagcagctgagtagtctctctcatgcaactttaaaaga
gcattaggctccatcttgaagttctcacactctcctcaaagaggctctga
ttacgtctaacaaagtggactgatgatcagatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_103955600_103956748
seq2: B6Ng01-148D05.b_46_1193

seq1  GAATTCTCTGGAATTCGATCACTAACCACTGCTGGTTCCAAGGAGGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGAATTCGATCACTAACCACTGCTGGTTCCAAGGAGGTGAT  50

seq1  GAAGACCATGATGGTGACCTAGCACTGTATCATTACCTCCCTGTGGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCATGATGGTGACCTAGCACTGTATCATTACCTCCCTGTGGCATT  100

seq1  TCAGGAGAACTCTAAGTCACCTGTTATAATCAATGCCAAGAGGTTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGAACTCTAAGTCACCTGTTATAATCAATGCCAAGAGGTTCTTCT  150

seq1  CCCTGTAAATCAAACACAAGTTAATGGATATTTTAATTACCTCAACTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAAATCAAACACAAGTTAATGGATATTTTAATTACCTCAACTTAC  200

seq1  CCATTGCACATGCATATTTCAAAATATGTTGCTTACCACTGATAGGCACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCACATGCATATTTCAAAATATGTTGCTTACCACTGATAGGCACG  250

seq1  AATTCATTCGCCAAGTGAAAACTCAACCATATTGCCCTTAATGTGCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTCGCCAAGTGAAAACTCAACCATATTGCCCTTAATGTGCAATA  300

seq1  CAGATCTACCTGTGGGTTAGATAGTAACATGTTTGATGGAGAGAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTACCTGTGGGTTAGATAGTAACATGTTTGATGGAGAGAAAACAA  350

seq1  CAAAGAGAGAAGGTATGTGAGGGGACTGAGGCTGGAGGCTTTGGGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAGAAGGTATGTGAGGGGACTGAGGCTGGAGGCTTTGGGGGAGG  400

seq1  GCCTCAGTGGGGAGGTGATAGGGCATAAGACTGTGAAGCGGGGAATGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGTGGGGAGGTGATAGGGCATAAGACTGTGAAGCGGGGAATGACG  450

seq1  GGGATAAACAGAATTTAGGGAATGAGATGGCCGGGCAAAGGAAACAGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAACAGAATTTAGGGAATGAGATGGCCGGGCAAAGGAAACAGACT  500

seq1  GTAGGAAGGTTCTAAACTACAGGCTGCCTGAACACGGAGGAATAGCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAGGTTCTAAACTACAGGCTGCCTGAACACGGAGGAATAGCCAAG  550

seq1  TAGCAAGTGTAAGACCTTCTTAATGTGAATGCAAACTAGAAAGGCATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGTGTAAGACCTTCTTAATGTGAATGCAAACTAGAAAGGCATAAC  600

seq1  ATTATAACCAATAAACCAGCACTGACATCTGAGCTCAGTGGCTAAACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAACCAATAAACCAGCACTGACATCTGAGCTCAGTGGCTAAACTTG  650

seq1  GTTACATCATTATGTCAGCCATGCAGCCTCAATCTTTTCTATAAAATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATCATTATGTCAGCCATGCAGCCTCAATCTTTTCTATAAAATGGG  700

seq1  AACACCGATTTTCCTGTCAGGAGCACGGGAGACTATATAATGATAGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCGATTTTCCTGTCAGGAGCACGGGAGACTATATAATGATAGGCCT  750

seq1  AACATGGAAATGGCAGATGGAGCCCTGACCAATGCTGGCCATGCAGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGAAATGGCAGATGGAGCCCTGACCAATGCTGGCCATGCAGTTCT  800

seq1  ACCCTAAGCATTCTCCTGGAGAGCCTCGGTTTGCGCCTTCTGGAGAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAGCATTCTCCTGGAGAGCCTCGGTTTGCGCCTTCTGGAGAAATG  850

seq1  GACCACACACCACCAGGCAGAAGCCTGCAGACTCCGTGCCTCCTGATACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACACACCACCAGGCAGAAGCCTGCAGACTCCGTGCCTCCTGATACC  900

seq1  TATCCTAATGATGATGTGCACCTCACACCTGCACCAAGCTTCCCAGTTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAATGATGATGTGCACCTCACACCTGCACCAAGCTTCCCAGTTAC  950

seq1  CTTCCCATTTGCTTTCAGCAGTCCACGGTGAACGCTGGAGTCCAGGAGAT  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTCCCATTTGCTTTCAGCAGTCCAC-GTGAACGCTGGAGTCCAGGAGAT  999

seq1  GCTTCCGGCATGACT-GTGCCACAGGCTGCCAGATGGAGAACAAC-TTGC  1048
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  GCTTCCGGCATGACTGGTGCCACAGGCTGCCAGATGGAGAACAACTTTGC  1049

seq1  GCTTGAGCAAACAAACAAAGCCAAACAGTTTCCAAGTTGTAGGCCTTTTG  1098
      |||||||| ||||||||||||||||||| ||||||||||||||| |||  
seq2  GCTTGAGC-AACAAACAAAGCCAAACAG-TTCCAAGTTGTAGGCTTTTGT  1097

seq1  TTTGTGTGAGCAGGGACATGAGCAAAC-ACCGGCTTGGTTCAGTTTGAAG  1147
      |||||||||||| |||||||| | ||| |||||||||| |||||||||||
seq2  TTTGTGTGAGCAAGGACATGAACCAACAACCGGCTTGG-TCAGTTTGAAG  1146

seq1  CA  1149
      ||
seq2  CA  1148

seq1: chr4_104139321_104140420
seq2: B6Ng01-148D05.g_70_1154 (reverse)

seq1  TGCATCTTTAATCATCATGTCACTTTTGTTAGACGTAATCAAGAGCCCTC  50
      ||||||  | ||||||| |||   |||||||||||||||| |||| ||||
seq2  TGCATC--TGATCATCA-GTCCACTTTGTTAGACGTAATC-AGAG-CCTC  45

seq1  TTTGAGGAGAGTTGTGGGAGACCCTCAAGGATGTGAGCCTAATGCTCCTT  100
      ||||||||||   ||| |||| | |||| |||| |||||||||||| |||
seq2  TTTGAGGAGA---GTGTGAGAACTTCAA-GATG-GAGCCTAATGCT-CTT  89

seq1  TTAAAAGTTTGCATGAGGAGAGACTACTCAGCCTGCTCATTCTCAGCAGG  150
      |||||   |||||||| |||||||||||||| ||||||||||||||||||
seq2  TTAAA--GTTGCATGA-GAGAGACTACTCAG-CTGCTCATTCTCAGCAGG  135

seq1  CAGAAATTAATCTGAACCATTCTCCAAATTTACCAGGCAAGCACTTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTAATCTGAACCATTCTCCAAATTTACCAGGCAAGCACTTGCCT  185

seq1  GAATAGACAAGGAGCCTAGGGGGATTTTTTGTGGGAGTGATGAGTTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGACAAGGAGCCTAGGGGGATTTTTTGTGGGAGTGATGAGTTGTGA  235

seq1  ATCTCAATATGATATGTGTGTAAAAAAAAAAAAACAAAAAACAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAATATGATATGTGTGTAAAAAAAAAAAAACAAAAAACAAAACAAA  285

seq1  AAACAGCACAACATCGGTCTGTTGTAAGAGAGAAAAGATGTTTGAGTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCACAACATCGGTCTGTTGTAAGAGAGAAAAGATGTTTGAGTGTT  335

seq1  TGGCAAAGCAGGTTATTTTTAAACTGAGAAAAAAATAGTATTGTAGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGCAGGTTATTTTTAAACTGAGAAAAAAATAGTATTGTAGGGAG  385

seq1  TTGAAAGATTTCACAGCTTTATTTATTCAGTTAATATATATGGGGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGATTTCACAGCTTTATTTATTCAGTTAATATATATGGGGGAGTT  435

seq1  TCTTGCATCTTATTAAGACAGGTGTAGAAGAAAATGCAAGGGAAATAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCATCTTATTAAGACAGGTGTAGAAGAAAATGCAAGGGAAATAGGT  485

seq1  GACCATCTGTGCCCTCGGGTGGCCCTCAGGCTCACTGTGGGACGAGATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATCTGTGCCCTCGGGTGGCCCTCAGGCTCACTGTGGGACGAGATAC  535

seq1  AGGTAGGTACAGCTGACAGCTGATGCAAGGCGGGCTGATTTGGTGGGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGTACAGCTGACAGCTGATGCAAGGCGGGCTGATTTGGTGGGAAC  585

seq1  GATGATACTTATACACTAAGCCAGGTATTCTTGGGTGTGCTTAGATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATACTTATACACTAAGCCAGGTATTCTTGGGTGTGCTTAGATTCTA  635

seq1  TCAGAGAAATAGTGTCTAGGACTGGGTGTCCCATCAGTTTTTGCCTTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAATAGTGTCTAGGACTGGGTGTCCCATCAGTTTTTGCCTTTAG  685

seq1  TCTCTCCTGCTGCAAAATGGGTCTCATAACAGCTTCCAGGGTAAGCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCTGCTGCAAAATGGGTCTCATAACAGCTTCCAGGGTAAGCAAAG  735

seq1  ATTCAAGGAGTTAAGTCATGCTTAGAGCAAACCATAGCCCAGAGAAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGGAGTTAAGTCATGCTTAGAGCAAACCATAGCCCAGAGAAGGCA  785

seq1  CTTGGAGTGTCAGTCTGCCTCCCTGCCAGCATCTCCTTTCCTCTCTGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGTGTCAGTCTGCCTCCCTGCCAGCATCTCCTTTCCTCTCTGAGC  835

seq1  TACATCCCAAGCACATAGGTGTGGGGTTGGTTCCTTAGGCTTTTGAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCCAAGCACATAGGTGTGGGGTTGGTTCCTTAGGCTTTTGAAGAC  885

seq1  TAGAGAGCAGGGCAGCATGTTCTTCTGGGGGTCTGAACCGGGATGTTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCAGGGCAGCATGTTCTTCTGGGGGTCTGAACCGGGATGTTAAA  935

seq1  CAGATGTCTTTTCCGTGTCCCTCTTGGTCACTCACTTCTCTTCTCCAACT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTCTTTTCCGTGTCCCTCTTGGTCACTCACTTCTCTTCTCCAACT  985

seq1  TTCTCCATTGGATCTCAGAGATTGGCATGTGTGGGCTGTCTCTGTCTCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATTGGATCTCAGAGATTGGCATGTGTGGGCTGTCTCTGTCTCAT  1035

seq1  TGTCCGCCTCTCTGTCCACCCTTAAGCCTCCTGGATGCTTATTGGAATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGCCTCTCTGTCCACCCTTAAGCCTCCTGGATGCTTATTGGAATTC  1085