BAC Information

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BAC

Clone NameB6Ng01-148N19
Chromosome4 (Build37)
Map Location 145,732,891 - 145,733,925
singlet/doubletsinglet
Overlap geneLOC433791
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790
Downstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148N19.bB6Ng01-148N19.g
ACCDH945355DH945356
length1,0341,034
definitionDH945355|Mus musculus domesticus DNA, BAC clone: B6Ng01-148N19, 5' end.DH945356|Mus musculus domesticus DNA, BAC clone: B6Ng01-148N19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaacaaaatatctctaattttatggttataattttattcagag
taacactgaatcaggtataaacttggtcaggtacaaatttatgatataac
cgatagcctcagggaaattactaaatagatatgcttcaatatccaaaatg
ctaggataaagattatggtgtcccagatctaaacacagagatcaaatgtc
aaaaagttaaataaaaaaaaaaaaaattgtgcaaaacaacagctctatgt
ccacttgaaaccttgtatatttttagattcataaataagggaacatttta
aagcaatagtaagatttttacaattgaaactattatatgtatagaaatat
aatttcttgttctggatatttaaatttttacttgaacttttttatcttga
gtgaagctagataagagataaggagtgatctcagagaatatagcactggt
tatttttccaaagaaagcagagaaatgtgaaggaaacacaaagaaaaagt
tatgatttttaactagaatttctctcattcaggagtctctgcatatctca
gagcatttacaaaagcacatagtaggaaaacctaaagaaagatacaggaa
ttcaacagtaagtttattcttacccacaaacaacagattattgtaattct
ccaacatcacatccatgtacaatgtcctctgagcaaaactgagagattcc
cattcctccagtgagaaatccaaggccacgtccttgaaggttaacagacc
ctgtaatggaaaactacctatttgatactggacaaaaatgcttttcagcc
aggcgtggtggtgcacgccttcaatcccagcacttgggaggtagaggcgg
gtggatttctgagtttcaggccagtctggtctacaaagtgagttccagga
cagacagggctacaactctcgaaccccccaacccaacccccaaaaagctt
tctgcaagaagcgggtgtgccgctgtgcaagttgttactgccttgcctaa
gcatgcacagtgaggctgcatgcgttggcctgcc
gaattcatacaggagagaaaccttacaaatgcagggaatgtgacaaatgc
tttactggaaaaggcagtctgagaattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtggcaaatgctttactgaaaaaagca
gtctgagaattcatcagagaattcatacaggacagaaaccttacaaatgc
agtgaatgtggcaaatgctttatcaaacaacccaatcttagtattcatca
gagaattcatacaggagagaaaccttataaatgtagtgaatgtaacaaat
gctttacccaaaattcctatcttaatattcatcagagaattcatgcagga
gagaaaccttacaaatgcagtgaatgtgacaaatgctttactacaaaagg
caatctgataattcatcagagaattcatacaagagagaaaccttacaaat
gcagtgaatgtgacaaatgctttaccaaacaatccaaacttagtattcat
cagagaattcatacaggagagaaaccttacaaatgcagtgaatgtgacaa
atgctttaccaaacaatccaaacttagtattcatcagagaattcatacag
gagagaaaccttacaaatgcagtgaatgtgacaaatgctttaatgaaaaa
aacagtctgaaaattcatcagagaattcatacaggagagagaccttacaa
tgtagtgaatgtgacaaatgcttttcccgaaaattctatcttggtattca
tcagagaattcatacaggaaagaaaccttacaaatgtagtgaatgtgaca
tatgcttttacccaaaaatcctgtctttaatattcaatcagagtaatcct
tgcaggagagaaacctttacaaaatgcagttaatgtgacaaatgctttac
tacaaatgcattctgataattcatcagagaattctactggagaagaaacc
ttacaatgtagtgaatgtggacaatgctttacccagaatccatctagatt
catcagaaaattctacagggagagaaccttacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145732891_145733925
seq2: B6Ng01-148N19.b_48_1081

seq1  GAATTCTAAACAAAATATCTCTAATTTTATGGTTATAATTTTATTCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATTCTAAACAAAATATCTCTAATTTTATGGTTATAATTTTATTCAGAG  50

seq1  TAACACTGAATCAGGTATAAACTTGGTCAGGTACAAATTTATGATATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGAATCAGGTATAAACTTGGTCAGGTACAAATTTATGATATAAC  100

seq1  CGATAGCCTCAGGGAAATTACTAAATAGATTTGCTTCAATATCCAAAATG  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CGATAGCCTCAGGGAAATTACTAAATAGATATGCTTCAATATCCAAAATG  150

seq1  CTAGGATAAAGATTATGGTGTCCCAGATCTAAACACAGAGATCAAATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATAAAGATTATGGTGTCCCAGATCTAAACACAGAGATCAAATGTC  200

seq1  AAAAAGTTAAAT-----AAAAAAAAATTGTGCAAAACAACAGCTTTATGT  245
      ||||||||||||     ||||||||||||||||||||||||||| |||||
seq2  AAAAAGTTAAATAAAAAAAAAAAAAATTGTGCAAAACAACAGCTCTATGT  250

seq1  CCACTTGAAACCTTGTATATTTTTAGATTCATAAATAAGGGAACATTTTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGAAACCTTGTATATTTTTAGATTCATAAATAAGGGAACATTTTA  300

seq1  AAGCAATAGTAAGATTTTTACAATTGAAACTATTATATGTATAGAAATAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATAGTAAGATTTTTACAATTGAAACTATTATATGTATAGAAATAT  350

seq1  AATTTCTTGTTCTGGATATTTAAATTTTTACTTGAACTTTTTTATCTTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTGTTCTGGATATTTAAATTTTTACTTGAACTTTTTTATCTTGA  400

seq1  GTGAAGCTAGATAAGAGATAAGGAGTGATCTCAGAGAATATAGCACTGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGCTAGATAAGAGATAAGGAGTGATCTCAGAGAATATAGCACTGGT  450

seq1  TATTTTTCCAAAGAAAGCAGAGAAATGTGAAGGAAACACAATGAAAAAGT  495
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATTTTTCCAAAGAAAGCAGAGAAATGTGAAGGAAACACAAAGAAAAAGT  500

seq1  TATGATTTTTAACTAGAATTTCTCTCATTCAGGAGTCTCTGCATATCTCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTTTAACTAGAATTTCTCTCATTCAGGAGTCTCTGCATATCTCA  550

seq1  GAGCATTTACAAAAGCACATAGTAGGAAAACCTAAAGAAAGATACAGGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTTACAAAAGCACATAGTAGGAAAACCTAAAGAAAGATACAGGAA  600

seq1  TTCAACAGTAAGTTTATGCTTACCCACAAACAACAGATTATTGTAATTCT  645
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCAACAGTAAGTTTATTCTTACCCACAAACAACAGATTATTGTAATTCT  650

seq1  CCAACATCACATCCATGTACAATGTCCTCTGAGCAAAACTGAGAGATTCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATCACATCCATGTACAATGTCCTCTGAGCAAAACTGAGAGATTCC  700

seq1  CATTCCTCCAGTGAGAAGTCCAAGGCCACGTCCTTGAAGGTTAACAGACC  745
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CATTCCTCCAGTGAGAAATCCAAGGCCACGTCCTTGAAGGTTAACAGACC  750

seq1  CTGTAATGGAAAACTACCTATTTGATACTGGACAAAAATGCTTTTCAGCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATGGAAAACTACCTATTTGATACTGGACAAAAATGCTTTTCAGCC  800

seq1  AGGCGTGGTGGTGCACGCCTTCAATCCCAGCACTTGGGAGGTAGAGGCGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGGTGGTGCACGCCTTCAATCCCAGCACTTGGGAGGTAGAGGCGG  850

seq1  GTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTACAAAGTGAGTTCCAGGA  895
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  GTGGATTTCTGAGTTTCAGGCCAGTCTGGTCTACAAAGTGAGTTCCAGGA  900

seq1  CAGACAGGGCTACAACTCGCGAACCCCCC-GCCCCCCCAAAAAAAAGCTT  944
      |||||||||||||||||| ||||||||||  |||  ||   ||||||| |
seq2  CAGACAGGGCTACAACTCTCGAACCCCCCAACCCAACCCCCAAAAAGC-T  949

seq1  TTCTGCAGGAAGCGGGTGTGGCCGCATGGGCCAAGTTTTTACTGCCTTGC  994
      ||||||| ||||||||||| ||||| || | |||||| ||||||||||||
seq2  TTCTGCAAGAAGCGGGTGT-GCCGC-TGTG-CAAGTTGTTACTGCCTTGC  996

seq1  CTGAGCATGTACAGTGTGGCTGCATGCGTGGGCTGCCTGCC  1035
      || |||||| |||||| |||||||||||| |   |||||||
seq2  CTAAGCATGCACAGTGAGGCTGCATGCGTTG---GCCTGCC  1034