BAC Information

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BAC

Clone NameB6Ng01-148P03
Chromosome4 (Build37)
Map Location 147,049,380 - 147,154,870
singlet/doubletdoublet
Overlap geneLOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677
Upstream geneMGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618
Downstream geneLOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148P03.bB6Ng01-148P03.g
ACCDH945419DH945420
length9281,053
definitionDH945419|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P03, 5' end.DH945420|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,049,380 - 147,050,305)(147,153,812 - 147,154,870)
sequence
gaattctcagactgcttttttcagtaaagcatttgccacattcactgcat
ttgtaaggtttctctcctgtatgaattctctgatgaattctcagactggt
tttatcagtaaagcatttgccacattcactgcatttgtaaggtttctctc
ctgtatgaattctctgatgcatagtaagattgaatttgtttttaaaacat
ttgtcacattcactacatttgtaaattttctcttctgtatgaattccctg
atgaatactaagatggatctgatgggtaaagcatttgtcacttttactac
tttcgtaaggtttctttccatgataaattctctgctgactttgtagtttt
tctctctgggtaagatatttgtgaaattcactacatttgtaagggttccc
tgcaatattgtcttttttcaccatgactttatgtttagaaacaaaaatct
tgtctaattctgcatttcggttgtgttttttcttctgcatgttaattcct
tgattgagactaatggtagaaaacaaacttaaactgtttacagagtcatt
gtatttgcaaacttctttagtgttcctgggcttaagtcttttttgggtcg
agaattgaagagcatcagagctgtgattagttttgtaaggtgtacactgg
agggattcaagaatgacattgctaagcttgtcccatttagaagacttctc
ttgaatattcatgtgttcatggacaatgtactggctgtcttgatccaata
ccttcccattctttccacgtatgcaatgattttctgaaaaaaaagggggg
gggcaattagaggtgacatgaattacttatataaggagtaagggactcaa
taatcagtgagcttatggattcgtactctcaagaaaggtatctctctctc
tctctctctctctctctctctctctctc
gaattcttttctttttgtagactctagagaccagtttttttccatattgt
gtcccagtctaatcttgtaggacatttgtctgagggaaatgcaaaggcag
atgcagatcaacacatcctcttttccttggaaatatcgacctaaaggaag
cacaaatgttttaggcaaacttccattagtatgcagcattgataaaatga
gtttcaataacaacaacgacaacaaacagactcctgaacagaagtggagt
gctcttcatgtacaaaatttaatatttgtaacccttgtgactcacacagt
actgttgcaaaatcatgttttgcacattagtaatactcacaatcctagtt
tgagaggctgaagtatgctcatgtcattgtggacactttcagaacaattc
cccttatgtacattgatgcaaaatactcaataaaatactcaaatactgaa
tccaaaagacatcactaagaatccatccaaaatgatgaagattgttttct
catccaatatatcttggggagtttccattccctctagtcttctcagttcc
tgtccactttttctcccttctggatctccctttctgtatctcagtaggaa
aacaaacaagcaagcaaacaaataaaatccatagactcactaattgacaa
atctgcccccaaaaagctaaggtaaaagttataatatatttcaaaagaac
tagcccaagcattagtatttgtacatcacactttctagtctcaaatttct
gatatatgtttgtgcattttttgtgtgaaatattttgctgattgctgata
aagtatattttcctatgggtccttttaagtgaagatatcaagaagctaaa
atttcaaaggggaagaaattttttggctcagctttgagttcattagtcag
aatgaaagacgatgattgatgtttactggatagaggatataatgtgggag
tctctgcaaacactagttctggtagagtaacatccatgagacaaaaagaa
atctaggtcaataccactctgtatatttcagcactggttgtgggtgtgtg
tgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147049380_147050305
seq2: B6Ng01-148P03.b_44_971

seq1  GAATTCTCAGACTGCTTTTTTCAGTAAAGCATTTGCCACATTCACTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGACTGCTTTTTTCAGTAAAGCATTTGCCACATTCACTGCAT  50

seq1  TTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATTCTCAGACTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATTCTCAGACTGGT  100

seq1  TTTATCAGTAAAGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAGTAAAGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTC  150

seq1  CTTTATGAATTCTCTGATGCATAGTAAGATTGAATTTGTTTTTAAAACAT  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGAATTCTCTGATGCATAGTAAGATTGAATTTGTTTTTAAAACAT  200

seq1  TTGTCACATTCACTACATTTGTAAATTTTCTCTTCTGTATGAATTCCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATTCACTACATTTGTAAATTTTCTCTTCTGTATGAATTCCCTG  250

seq1  ATGAATACTAAGATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATACTAAGATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTAC  300

seq1  TTTCGTAAGGTTTCTTTCCATGATAAATTCTCTGCTGACTTTGTAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTAAGGTTTCTTTCCATGATAAATTCTCTGCTGACTTTGTAGTTTT  350

seq1  TCTCTCTGGGTAAGATATTTGTGAAATTCACTACATTTGTAAGGGTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGGGTAAGATATTTGTGAAATTCACTACATTTGTAAGGGTTCCC  400

seq1  TGCAATATTGTCTTTTTTCACCATGACTTTATGTTTAGAAACAAAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTGTCTTTTTTCACCATGACTTTATGTTTAGAAACAAAAATCT  450

seq1  TGTCTAATTCTGCATTTCGGTTGTGTTTTTTCTTCTGCATGTTAATTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAATTCTGCATTTCGGTTGTGTTTTTTCTTCTGCATGTTAATTCCT  500

seq1  TGATTGAGACTAATGGTAGAAAACAAACTTAAACTGTTTACAGAGTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAGACTAATGGTAGAAAACAAACTTAAACTGTTTACAGAGTCATT  550

seq1  GTATTTGCAAACTTCTTTAGTGTTCCTGGGCTTAAGTCTTTTTTGGGTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCAAACTTCTTTAGTGTTCCTGGGCTTAAGTCTTTTTTGGGTCG  600

seq1  AGAATTGAAGAGCATCAGAGCTGTGATTAGTTTTGTAAGGTGTACACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAAGAGCATCAGAGCTGTGATTAGTTTTGTAAGGTGTACACTGG  650

seq1  AGGGATTCAAGAATGACATTGCTAAGCTTGTCCCATTTAGAAGACTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTCAAGAATGACATTGCTAAGCTTGTCCCATTTAGAAGACTTCTC  700

seq1  TTGAATATTCATGTGTTCATGGACAATGTACTGGCTGTCTTGATCCAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATTCATGTGTTCATGGACAATGTACTGGCTGTCTTGATCCAATA  750

seq1  CCTTCCCATTCTTTCCACGTATGCAATGATTTTCTGAAAAAAAA--GGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  CCTTCCCATTCTTTCCACGTATGCAATGATTTTCTGAAAAAAAAGGGGGG  800

seq1  GGGCAATTAGAGGTGACATGAATTACTTATATAAGGAGTAAGGGACTCAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATTAGAGGTGACATGAATTACTTATATAAGGAGTAAGGGACTCAA  850

seq1  TAATCAGTGAGCTTATGGATTCGTACTCTCAAGAAAGGTATCTCTCTCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGTGAGCTTATGGATTCGTACTCTCAAGAAAGGTATCTCTCTCTC  900

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTC  926
      ||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTC  928

seq1: chr4_147153812_147154870
seq2: B6Ng01-148P03.g_67_1119 (reverse)

seq1  CCACAACACACCCACAACCAGTGCTGAAATAATTACAGAGTGGTATTGAA  50
      |||| ||||||||||||||||||||||||||  |||||||||||||||| 
seq2  CCAC-ACACACCCACAACCAGTGCTGAAATA--TACAGAGTGGTATTGAC  47

seq1  CTAGATTTCTTTTTTGTCTCATGGATTGTTACTCTACCAGAACTAGTGTT  100
      ||||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  CTAGATTTC-TTTTTGTCTCATGGA-TGTTACTCTACCAGAACTAGTGTT  95

seq1  TGCAGAGACTCCCACATTTATATCCTCTATCCAGTAAACATCAATCATCG  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGCAGAGACTCCCACA-TTATATCCTCTATCCAGTAAACATCAATCATCG  144

seq1  TCTTTCATTCTGACTAATGAACTCAAAGCTGAGCCAAAAAATTTCTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTCTGACTAATGAACTCAAAGCTGAGCCAAAAAATTTCTTCCC  194

seq1  CTTTGAAATTTTAGCTTCTTGATATCTTCACTTAAAAGGACCCATAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAATTTTAGCTTCTTGATATCTTCACTTAAAAGGACCCATAGGAA  244

seq1  AATATACTTTATCAGCAATCAGCAAAATATTTCACACAAAAAATGCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTTTATCAGCAATCAGCAAAATATTTCACACAAAAAATGCACAA  294

seq1  ACATATATCAGAAATTTGAGACTAGAAAGTGTGATGTACAAATACTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATCAGAAATTTGAGACTAGAAAGTGTGATGTACAAATACTAATG  344

seq1  CTTGGGCTAGTTCTTTTGAAATATATTATAACTTTTACCTTAGCTTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCTAGTTCTTTTGAAATATATTATAACTTTTACCTTAGCTTTTTG  394

seq1  GGGGCAGATTTGTCAATTAGTGAGTCTATGGATTTTATTTGTTTGCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGATTTGTCAATTAGTGAGTCTATGGATTTTATTTGTTTGCTTGC  444

seq1  TTGTTTGTTTTCCTACTGAGATACAGAAAGGGAGATCCAGAAGGGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTCCTACTGAGATACAGAAAGGGAGATCCAGAAGGGAGAAA  494

seq1  AAGTGGACAGGAACTGAGAAGACTAGAGGGAATGGAAACTCCCCAAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGACAGGAACTGAGAAGACTAGAGGGAATGGAAACTCCCCAAGATA  544

seq1  TATTGGATGAGAAAACAATCTTCATCATTTTGGATGGATTCTTAGTGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATGAGAAAACAATCTTCATCATTTTGGATGGATTCTTAGTGATG  594

seq1  TCTTTTGGATTCAGTATTTGAGTATTTTATTGAGTATTTTGCATCAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGATTCAGTATTTGAGTATTTTATTGAGTATTTTGCATCAATGT  644

seq1  ACATAAGGGTAATTGTTCTGAAAGTGTCCACAATGACATGAGCATACTTC  700
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGGGGAATTGTTCTGAAAGTGTCCACAATGACATGAGCATACTTC  694

seq1  AGCCTCTCAAACTAGGATTGTGAGTATTACTAATGTGCAAAACATGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTCAAACTAGGATTGTGAGTATTACTAATGTGCAAAACATGATTT  744

seq1  TGCAACAGTACTGTGTGAGTCACAAGGGTTACAAATATTAAATTTTGTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACAGTACTGTGTGAGTCACAAGGGTTACAAATATTAAATTTTGTAC  794

seq1  ATGAAGAGCACTCCACTTCTGTTCAGGAGTCTGTTTGTTGTCGTTGTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGCACTCCACTTCTGTTCAGGAGTCTGTTTGTTGTCGTTGTTGT  844

seq1  TATTGAAACTCATTTTATCAATGCTGCATACTAATGGAAGTTTGCCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAACTCATTTTATCAATGCTGCATACTAATGGAAGTTTGCCTAAA  894

seq1  ATATTTGTGCTTCCTTTAGGTCGATATTTCCAAGGAAAAGAGGATGTGTT  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTGCTTCCTTTAGGTCGATATTTCCAAGGAAAAGAGGATGTGTT  944

seq1  GATCTGTATCTGCCTTTGCATTTCCCTCAGACAAATGTCCTACAAGATTA  1000
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCATCTGCCTTTGCATTTCCCTCAGACAAATGTCCTACAAGATTA  994

seq1  GACTGGGACACAATATGGAAAAAAACTGGTCTCTAGAGTCTACAAAAAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGACACAATATGGAAAAAAACTGGTCTCTAGAGTCTACAAAAAGA  1044

seq1  AAAGAATTC  1059
      |||||||||
seq2  AAAGAATTC  1053