BAC Information

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BAC

Clone NameB6Ng01-150A18
Chromosome4 (Build37)
Map Location 73,670,432 - 73,807,725
singlet/doubletdoublet
Overlap geneFrmd3
Upstream geneLOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik
Downstream geneLOC100039774, Jmjd2c, LOC100040258, LOC100039814, LOC636847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150A18.bB6Ng01-150A18.g
ACCDH946226DH946227
length1,035980
definitionDH946226|Mus musculus domesticus DNA, BAC clone: B6Ng01-150A18, 5' end.DH946227|Mus musculus domesticus DNA, BAC clone: B6Ng01-150A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,807,101 - 73,807,725)(73,670,432 - 73,671,036)
sequence
gaattccccacctcaacccattactgcaacagacccattgttacccacct
gtatcgaaatctacttcctttaaaaaatatcttgctgcttgacacagtct
tgatctgactggactttgcataccttcaaggaaaagcacaacagaggtga
tagtgaaatattcaagcaggacacgcagtacaactgtggtcattaccaac
tttaacttctagaaagaaattaattttacatgatgaccaagcttacacac
acatgatctggaggggtttctcaaaaaatagaaattttatgtacattatc
gtttgatatgttcagcagtgatcaatgttatttccttttgttgtttgcga
gcactggtcataagccacacatttgatattatactccatttctagttcag
gcctgcaagaaagtttcaggtatgttgatgactagaaggaattgtgtaga
actgcatgtaatagggtaactcaattgtcatcagagagatttattccaac
atttgatggaagtagatgcacatatccacaaccaaatattaggtggagct
tgggaaacctcaagaaagagtggggggaagaactctaggagccagagagg
tcaatggcatgagaagaacatgggccacagaattaactaagtgggagtca
taggggttcacaagggtctgaagcagtcatcacagtgcctgaatggcttg
gtactaggtcctctgcatacacgtggagttttagcttagagtgtttgtgt
gacccctatcagtgggaatgaggtatgtttctgactattgcctgctctga
ggacccttttcctcctactgggttgcctcatctgactttaatgaggtttt
gtgctttggatattgcactgtggtatatgcagtgttcagttgctattcct
gggaggcttgctcttttctgaagggaaatggtggcttagtcaatctggtg
gagagaaagggcaccagactggaggagtgagagagggaagactgtagagg
gttgtagtagatgagaaataatacaaaattttaaa
gaattcaaaaggtgaagctaccccagataaagttccaggtggtataaaag
aacatgaaggtattgtttgtttgtttgtttttcttttcaactccagtaat
tcaataacccacccatttctgcttcctggtcctggcattcccctatactg
gggcatagaatcttcacaggaccaagggcccctcctcccattgatatcca
acaaggccatcctctgctacatacgcagctagagccatgtgttttctttg
gttggtagtttggtcccagggattctgtgggtactggttagctcatactg
ttgttcctcctatggggctgcaaacccattcagctccatgggtactttct
ctagctccttcattggggaccctgtgctccatccaatggatggctgtgag
catcaacttctgtatttctcaggcactggcagagcctcttaggagaaagc
tatatcaggctcctgtcagcaagcacttgttggcatctatagtagtgtct
aaatttagtgatagtgtatgggatggatccccaggtggggcagcctttgg
atggtctccagtctctgctctacactttgtctctataaccccttccatgg
gtattttattcccctcctaagaaggattgaagtatcacactttgatcttc
cttcttcttgagtttcatgttttgtaaattgtatcttgggcattccgaaa
ttctgggctaatattcacttatcagtgagtgcatatcatgtgtgttcttt
tgtgattgggttacctcactcaggatgatattttctagtctcatccattt
gcataagaatttaatgagttcattgtttttaatagctgagtagtactcca
ttgtgtaaatgtgccacattttttgtatccattgctctgttgagggtcat
ctgggttctttccagcttctggctattataaataaagctgctatgaacat
agtagagcatgtgtccttattacatattgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73807101_73807725
seq2: B6Ng01-150A18.b_45_669 (reverse)

seq1  GCCCATGTTCTTCTCATGCCATTGACCTCTCTGGCTCCTAGAGTTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGTTCTTCTCATGCCATTGACCTCTCTGGCTCCTAGAGTTCTTCC  50

seq1  CCCCACTCTTTCTTGAGGTTTCCCAAGCTCCACCTAATATTTGGTTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTCTTTCTTGAGGTTTCCCAAGCTCCACCTAATATTTGGTTGTGG  100

seq1  ATATGTGCATCTACTTCCATCAAATGTTGGAATAAATCTCTCTGATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGCATCTACTTCCATCAAATGTTGGAATAAATCTCTCTGATGACA  150

seq1  ATTGAGTTACCCTATTACATGCAGTTCTACACAATTCCTTCTAGTCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTACCCTATTACATGCAGTTCTACACAATTCCTTCTAGTCATCA  200

seq1  ACATACCTGAAACTTTCTTGCAGGCCTGAACTAGAAATGGAGTATAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTGAAACTTTCTTGCAGGCCTGAACTAGAAATGGAGTATAATAT  250

seq1  CAAATGTGTGGCTTATGACCAGTGCTCGCAAACAACAAAAGGAAATAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGTGGCTTATGACCAGTGCTCGCAAACAACAAAAGGAAATAACA  300

seq1  TTGATCACTGCTGAACATATCAAACGATAATGTACATAAAATTTCTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCACTGCTGAACATATCAAACGATAATGTACATAAAATTTCTATTT  350

seq1  TTTGAGAAACCCCTCCAGATCATGTGTGTGTAAGCTTGGTCATCATGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAACCCCTCCAGATCATGTGTGTGTAAGCTTGGTCATCATGTAA  400

seq1  AATTAATTTCTTTCTAGAAGTTAAAGTTGGTAATGACCACAGTTGTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTCTTTCTAGAAGTTAAAGTTGGTAATGACCACAGTTGTACTG  450

seq1  CGTGTCCTGCTTGAATATTTCACTATCACCTCTGTTGTGCTTTTCCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCCTGCTTGAATATTTCACTATCACCTCTGTTGTGCTTTTCCTTGA  500

seq1  AGGTATGCAAAGTCCAGTCAGATCAAGACTGTGTCAAGCAGCAAGATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGCAAAGTCCAGTCAGATCAAGACTGTGTCAAGCAGCAAGATATT  550

seq1  TTTTAAAGGAAGTAGATTTCGATACAGGTGGGTAACAATGGGTCTGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGGAAGTAGATTTCGATACAGGTGGGTAACAATGGGTCTGTTGC  600

seq1  AGTAATGGGTTGAGGTGGGGAATTC  625
      |||||||||||||||||||||||||
seq2  AGTAATGGGTTGAGGTGGGGAATTC  625

seq1: chr4_73670432_73671036
seq2: B6Ng01-150A18.g_68_672

seq1  GAATTCAAAAGGTGAAGCTACCCCAGATAAAGTTCCAGGTGGTATAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGGTGAAGCTACCCCAGATAAAGTTCCAGGTGGTATAAAAG  50

seq1  AACATGAAGGTATTGTTTGTTTGTTTGTTTTTCTTTTCAACTCCAGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAGGTATTGTTTGTTTGTTTGTTTTTCTTTTCAACTCCAGTAAT  100

seq1  TCAATAACCCACCCATTTCTGCTTCCTGGTCCTGGCATTCCCCTATACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAACCCACCCATTTCTGCTTCCTGGTCCTGGCATTCCCCTATACTG  150

seq1  GGGCATAGAATCTTCACAGGACCAAGGGCCCCTCCTCCCATTGATATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAGAATCTTCACAGGACCAAGGGCCCCTCCTCCCATTGATATCCA  200

seq1  ACAAGGCCATCCTCTGCTACATACGCAGCTAGAGCCATGTGTTTTCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCATCCTCTGCTACATACGCAGCTAGAGCCATGTGTTTTCTTTG  250

seq1  GTTGGTAGTTTGGTCCCAGGGATTCTGTGGGTACTGGTTAGCTCATACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAGTTTGGTCCCAGGGATTCTGTGGGTACTGGTTAGCTCATACTG  300

seq1  TTGTTCCTCCTATGGGGCTGCAAACCCATTCAGCTCCATGGGTACTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTCCTATGGGGCTGCAAACCCATTCAGCTCCATGGGTACTTTCT  350

seq1  CTAGCTCCTTCATTGGGGACCCTGTGCTCCATCCAATGGATGGCTGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTTCATTGGGGACCCTGTGCTCCATCCAATGGATGGCTGTGAG  400

seq1  CATCAACTTCTGTATTTCTCAGGCACTGGCAGAGCCTCTTAGGAGAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACTTCTGTATTTCTCAGGCACTGGCAGAGCCTCTTAGGAGAAAGC  450

seq1  TATATCAGGCTCCTGTCAGCAAGCACTTGTTGGCATCTATAGTAGTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGGCTCCTGTCAGCAAGCACTTGTTGGCATCTATAGTAGTGTCT  500

seq1  AAATTTAGTGATAGTGTATGGGATGGATCCCCAGGTGGGGCAGCCTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGTGATAGTGTATGGGATGGATCCCCAGGTGGGGCAGCCTTTGG  550

seq1  ATGGTCTCCAGTCTCTGCTCTACACTTTGTCTCTATAACCCCTTCCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTCCAGTCTCTGCTCTACACTTTGTCTCTATAACCCCTTCCATGG  600

seq1  GTATT  605
      |||||
seq2  GTATT  605