BAC Information

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BAC

Clone NameB6Ng01-150F09
Chromosome4 (Build37)
Map Location 146,551,003 - 146,552,159
singlet/doubletsinglet
Overlap geneOTTMUSG00000010657
Upstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570
Downstream geneLOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150F09.bB6Ng01-150F09.g
ACCDH946441DH946442
length1,1421,085
definitionDH946441|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F09, 5' end.DH946442|Mus musculus domesticus DNA, BAC clone: B6Ng01-150F09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtatctttctttaggttttcctactatgtgcttttgtaaatg
ctctgagatatgcagagactcctgaatgagagaaattctagttaaaaatc
ataactttttcattgtgtttccttcacatttctctgctttctttggaaaa
ataaccagtgctatattctctgagatcactccttatctcttatctagctt
cactcaagataaaaaagttcaagcaaaaatttaaatatccagaacaagaa
attatatttctatacatataatagtttcaattgtaaaaatcttactattg
ctttaaaatgttcccttatttatgaatctaaaaatatacaaggtttcaag
tggacatagagctgttgttttgcacaatttttttttatttaactttttga
catttgatctctgtgtttagatctgggacaccataatctttatcctagca
ttttggatattgaagcaaatctatttagtaatttccctgaggctatcggt
tatatcataaatttgtacctgaccaagtttatacctgattcagtgttact
ctgaataaaattataaccataaaattagagatattttgtttagaattcta
ctttctgaaaattcactagagaaggatcatttatttgtcccagcttatgc
aaagtacaattttcttttttattggtcattttatttatttacatgtcgat
tgttatgccccttcttcattccctgtctggaaactctatatcccacccct
cccccccagcttttatgatgatgccccccaccgatccacctactcccatc
tcatgcccctaggattctcctatgctgggataatgaaccttctgagtacc
aagggattcccttcctgttgatgccatataaggcaatccccttctatata
taaagctggagccatttgtacatccatctgtacactttgggttggtgatt
ttccccttcgaagcttgtatggtcttgttgtttgtatgttgttcctctac
acagttgcaaagcccttcagcttctcagtcttccttaactcttcatgtag
ccccctgctcaagtctaatggttggctgcaggatctgcactccctttgtc
agtctctggaatgcttacttcaactctttcatttttttccct
gaattcacaatgaagcaactgtggaaggctgagaaacttcaaaagaaatg
ttcaaagtctttagtgatcagaaaaatataaatcaaagcaacactgagat
tccaccttccaccaatcagaatggctaagatcaaaaactcaggtgacagc
acttgctggccaggatgtggagaaagaggaccactcctccattgcttgtg
gaattgcaaactggtcaaccattctggaaatcaatctggagattcctaag
aaaattggaaatagatataccttaaaacccagctacaccactcttgggca
tatacacaaaagatgccccaccatgacacaggggcttgtgttccactatg
ttcagagtggccttatttgtgatagccaggagctggaaacaacctatatg
ccccacaatggaagactcgatactgaaatatggttcgtttacacaatgga
atattattcatctattaagaacaatgacatcaagaggtttggaggaaaat
ggattgaactaggaaattccatcctgagtgaggtaactcaaactcagaaa
ggacatgcatagtatgtacacactaataaacggatatcagccaaaaaaag
tatataataaaatgtaagtgacgaaagagggttaataagttcaaggttcc
aagtgaggatatctcaatcccacttgggagagagaagaaagcagtcatgg
gtgaagaaggagggagggacctgagtgggagtagggacagagaaagggaa
ggggaaacatgatcagacattatgagggatagggggaggactgaagccct
gaggaccagtagaaaaaatggaaatagacagcctcagcaagtaggctatg
gaggtccatctcacatgttccaagacctaggagtgagagactcccaggac
tcaagggagagaccttgaaaagtgctgtccagctcaagtggagtgatgga
gttgcaattgttcctgttgaaggatcttcaggacaaacctggagaagcac
tatgagagaatgaggtcattgacaactaatttagggatccatattcaggg
tagccaaggacgatgacactgtacttctacgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146551003_146552159
seq2: B6Ng01-150F09.b_47_1188

seq1  GAATTCCTGTATCTTTCTTTAGGTTTTCCTACTATGTGCTTTTGTAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTATCTTTCTTTAGGTTTTCCTACTATGTGCTTTTGTAAATG  50

seq1  CTCTGAGATATGCAGAGACTCCTGAATGAGAGAAATTCTAGTTAAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGATATGCAGAGACTCCTGAATGAGAGAAATTCTAGTTAAAAATC  100

seq1  ATAACTTTTTCATTGTGTTTCCTTCACATTTCTCTGCTTTCTTTGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTTTCATTGTGTTTCCTTCACATTTCTCTGCTTTCTTTGGAAAA  150

seq1  ATAACCAGTGCTATATTCTCTGAGATCACTCCTTATCTCTTATCTAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGTGCTATATTCTCTGAGATCACTCCTTATCTCTTATCTAGCTT  200

seq1  CACTCAAGATAAAAAAGTTCAAGCAAAAATTTAAATATCCAGAACAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAGATAAAAAAGTTCAAGCAAAAATTTAAATATCCAGAACAAGAA  250

seq1  ATTATATTTCTATACATATAATAGTTTCAATTATAAAAATCTTACTATTG  300
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTATATTTCTATACATATAATAGTTTCAATTGTAAAAATCTTACTATTG  300

seq1  CTTTAAAATGTTCCCTTATTTATGAATCTAAAAATATACAAGGTTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATGTTCCCTTATTTATGAATCTAAAAATATACAAGGTTTCAAG  350

seq1  TGGACATAGAGCTGTTGTTTTGCACAATTTTTTTTTATTTAACTTTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAGAGCTGTTGTTTTGCACAATTTTTTTTTATTTAACTTTTTGA  400

seq1  CATTTGATCTCTGTGTTTAGATCTGGGACACCATAATCTTTATCCTAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATCTCTGTGTTTAGATCTGGGACACCATAATCTTTATCCTAGCA  450

seq1  TTTTGGATATTGAAGCAAATCTATTTAGTAATTTCCCTGAGGCTATCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTGGATATTGAAGCAAATCTATTTAGTAATTTCCCTGAGGCTATCGGT  500

seq1  TATATCATAAATTTGTACCTGACCAAGTTTATACCTGATTCAGTGTTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCATAAATTTGTACCTGACCAAGTTTATACCTGATTCAGTGTTACT  550

seq1  CTGAATAAAATTATAACCATAAAATTAGAGATATTTTGTTTAGAATTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAAATTATAACCATAAAATTAGAGATATTTTGTTTAGAATTCTA  600

seq1  CTTTCTGAAAATTCACTAGAGAAGGATCATTTATTTGTCCCAGCTTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAAATTCACTAGAGAAGGATCATTTATTTGTCCCAGCTTATGC  650

seq1  AAAGTACAATTTTCTTTTTTATTGGTCATTTTATTTATTTACATGTCGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACAATTTTCTTTTTTATTGGTCATTTTATTTATTTACATGTCGAT  700

seq1  TGTTATGCCCCTTCTTCATTCCCTGTCTGGAAACTCTATATCCCACCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGCCCCTTCTTCATTCCCTGTCTGGAAACTCTATATCCCACCCCT  750

seq1  CCCCCCCCAGCTTTTATGATGATGCCCCCCACCGATCCACCTACTCCCAT  800
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CCCCCCCAGCTTTTATGATGATGCCCCCCACCGATCCACCTACTCCCAT  799

seq1  CTCATGCCCCTAGGATTCTCCTATGCTGGGATAATGAACCTTCTGAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCCCCTAGGATTCTCCTATGCTGGGATAATGAACCTTCTGAGTAC  849

seq1  CAAGGGACTCCCCTCCTGTTGATGCCATATAAGGCAATCCCCTTCTATAT  900
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATTCCCTTCCTGTTGATGCCATATAAGGCAATCCCCTTCTATAT  899

seq1  ATAAAGCTGGAGCCATTTGTACATCCATGTGTACACTTT-GGTTGGTGAT  949
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  ATAAAGCTGGAGCCATTTGTACATCCATCTGTACACTTTGGGTTGGTGAT  949

seq1  TTTCCCCTTCGAAGCTTTGTATGGTCTTGTTGTTTGATATTGTTGTTCCT  999
      ||||||||||||||| |||||||||||||||||||| || ||||||||||
seq2  TTTCCCCTTCGAAGC-TTGTATGGTCTTGTTGTTTG-TA-TGTTGTTCCT  996

seq1  CCTACACAGTTGCAAAGCCCTTCAGCTTCTTCAGTCCTTCCCTTAACTCC  1049
       |||||||||||||||||||||||||||| ||||||  | |||||||| |
seq2  -CTACACAGTTGCAAAGCCCTTCAGCTTC-TCAGTC--TTCCTTAACT-C  1041

seq1  TTCATGTAGCCCCCCTGCTC-AGTCTAATGGTTGGCTGCAGAGATCTGCA  1098
      ||||||||| |||||||||| |||||||||||||||||||| ||||||||
seq2  TTCATGTAG-CCCCCTGCTCAAGTCTAATGGTTGGCTGCAG-GATCTGCA  1089

seq1  -TCTCTTTGGTCCAGTCTCTGGATGGCCTTACCTTCAGCCTCTTTTCCAT  1147
       || |||||   |||||||||||  | |||| |||||  ||||||  |||
seq2  CTCCCTTTG--TCAGTCTCTGGAATG-CTTA-CTTCA-ACTCTTT--CAT  1132

seq1  TTTTTTCCCT  1157
      ||||||||||
seq2  TTTTTTCCCT  1142