BAC Information

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BAC

Clone NameB6Ng01-151G19
Chromosome4 (Build37)
Map Location 146,931,011 - 147,055,268
singlet/doubletdoublet
Overlap geneOTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100
Upstream geneLOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718
Downstream geneLOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151G19.bB6Ng01-151G19.g
ACCDH947245DH947246
length1,2141,120
definitionDH947245|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G19, 5' end.DH947246|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,931,011 - 146,932,238)(147,054,124 - 147,055,268)
sequence
gaattcagtaagcaagcaagcaaaaatccaaaacaataaaaattgctgtg
aagaattgggaagctaattaattaaaaggtcctaaagtagatggtcttag
aagaattgcaggaagctgctcaatattgggcaggttcagaaggaggggct
ctgaggaaccaggcagaaatgacaggatgtttctccttttcatcattctc
cttgtaccttggctgcctcgtggtcaggaagttctggaggaagactagtg
tctagtatttgcagaacctgaaaacttccttgctggcctcctaggacatt
gagcagctggtcctgtaaccttccaggtcagaggagctgttgggctggga
aatgggcaggagcagggcaggcttgtggagcaggggtgcattttctgtag
ctactctcacaattctgttgtggatatcttaccattgtcaggaagtttga
gatcctgtgacttgggttcatggtgatgttttaatcaattttatggttgc
cagaatatttttctaaagtatccttgtagatccttggctgaatctggaat
ttgtataccgggaggtttgtctttgcaaaagcctttataatctcctgtaa
atcaaattcgttcatgctttcttaactcccctgttcctccattaaccatt
tcatgtccctttctccagggaactgagtaggcatcctgagagagctttgt
agatatttgtcatatgggggatcggtggagatttcattgaattggaaaat
ttacgttataaagcaccataatatggctgtaaatattaacattaacctaa
caaagttatagtctccattagtttcacactgaggtatatgcagtctttga
tgtaaatacagcattcagagatgcgtcttcatagtcttagttattaatgt
taccccttagtttcattgaaacatgaagacaggattgcagcaatgtacat
agaggagaagatatatagtagttctgttaaccctgagtgtgtcagagaaa
aacattctacatgttggaaagctttttaaaatatttacatctgaccagga
gatggactttgatcactttctactgccagttttataagcccttgtcgttt
tttgtgagctttattaaattttctaagtcatgcactgcgaagctgcaaga
aagaatacctggttctggcctggtggtgggtaatttttggcattcacgga
gggaaagcattcag
gaattcagacatcatagtgagctgcaatatatttagagacaattagatta
gtttttaaagtagaaacagcaagtacctttcccctttagtcatttgttca
tggcacaggttttgcatttttgaggcatatttgcaacaaagacagtatat
tgtctgtatattataatttttgataaacaaaagaagaatgatagatcaca
cttctctatgaaaagtgtaattatgatatacatatggtcaaattctgaag
aaaaaagttataattagaagactgaaattttcagttaggttaatacaatg
aggaataatttattaaattttaatgaatatttagtataattctccctcaa
tttaaaaacacagtttgttcaaaaattattttacttcattggaatgcatt
gccacatatgatatttgcttaaacatacatagctaatcattttatagtga
aagaccatatggtattagagaaattgttattaagcatatttatttatgtc
tccacaggagctaattaagagtcaaagatgtggctctgcagttaaggtct
cttcttcttgcagtattcagattcagttttctgtacctgcctggggactt
cttttccttccagaactcttttttttgagaatatgttttaccatagcctg
catttctcatgtgaacagagctacgtgccagcaaaaataacattccatat
gaaattaaagtcaataaacattattttaaaattataaatgatctggaaat
attacataggacacaagaaaccatccaggaaagagaatgagaggaaatgt
gaagcctgaatgagtttcagtaccgctgacccctcatatcaacattttaa
cagttaggaatgatccctatgtatgataaaaatgttttgtatctgtggaa
cccagagctggagactcttatgtgttcattgtaatgtgggaaagatttat
cctatcaatgctgtatttaggtattaactttttctgagagcacgtattgt
gaagaatttataatacatgaaaacgctgtatcagcatcccatcaacagaa
atctgctcagagaaatgattatatcaatccaccattttttaaaactatat
ttattatattaggcactgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146931011_146932238
seq2: B6Ng01-151G19.b_44_1257

seq1  GAATTCAGTAAGCAAGCAAGCAAAAATCCAAAACAATAAAAATTGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGCAAGCAAGCAAAAATCCAAAACAATAAAAATTGCTGTG  50

seq1  AAGAATTGGGAAGCTAATTAATTAAAAGGTCCTAAAGTAGATGGTCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGGGAAGCTAATTAATTAAAAGGTCCTAAAGTAGATGGTCTTAG  100

seq1  AAGAATTGCAGGAAGCTGCTCAATATTGGGCAGGTTCAGAAGGAGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGCAGGAAGCTGCTCAATATTGGGCAGGTTCAGAAGGAGGGGCT  150

seq1  CTGAGGAACCAGGCAGAAATGACAGGATGTTTCTCCTTTTCATCATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAACCAGGCAGAAATGACAGGATGTTTCTCCTTTTCATCATTCTC  200

seq1  CTTGTACCTTGGCTGCCTCGTGGTCAGGAAGTTCTGGAGGAAGACTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACCTTGGCTGCCTCGTGGTCAGGAAGTTCTGGAGGAAGACTAGTG  250

seq1  TCTAGTATTTGCAGAACCTGAAAACTTCCTTGCTGGCCTCCTAGGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTATTTGCAGAACCTGAAAACTTCCTTGCTGGCCTCCTAGGACATT  300

seq1  GAGCAGCTGGTCCTGTAACCTTCCAGGTCAGAGGAGCTGTTGGGCTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCTGGTCCTGTAACCTTCCAGGTCAGAGGAGCTGTTGGGCTGGGA  350

seq1  AATGGGCAGGAGCAGGGCAGGCTTGTGGAGCAGGGGTGCATTTTCTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGCAGGAGCAGGGCAGGCTTGTGGAGCAGGGGTGCATTTTCTGTAG  400

seq1  CTACTCTCACAATTCTGTTGTGGATATCTTACCATTGTCAGGAAGTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTCACAATTCTGTTGTGGATATCTTACCATTGTCAGGAAGTTTGA  450

seq1  GATCCTGTGACTTGGGTTCATGGTGATGTTTTAATCAATTTTATGGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGTGACTTGGGTTCATGGTGATGTTTTAATCAATTTTATGGTTGC  500

seq1  CAGAATATTTTTCTAAAGTATCCTTGTAGATCCTTGGCTGAATCTGGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATTTTTCTAAAGTATCCTTGTAGATCCTTGGCTGAATCTGGAAT  550

seq1  TTGTATACCGGGAGGTTTGTCTTTGCAAAAGCCTTTATAATCTCCTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATACCGGGAGGTTTGTCTTTGCAAAAGCCTTTATAATCTCCTGTAA  600

seq1  ATCAAATTCGTTCATGCTTTCTTAACTCCCCTGTTCCTCCATTAACCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTCGTTCATGCTTTCTTAACTCCCCTGTTCCTCCATTAACCATT  650

seq1  TCATGTCCCTTTCTCCAGGGAACTGAGTAGGCATCCTGAGAGAGCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCCCTTTCTCCAGGGAACTGAGTAGGCATCCTGAGAGAGCTTTGT  700

seq1  AGATATTTGTCATATGGGGGATCGGTGGAGATTTCATTGAATTGGAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGTCATATGGGGGATCGGTGGAGATTTCATTGAATTGGAAAAT  750

seq1  TTACGTTATAAAGCACCATAATATGGCTGTAAATATTAACATTAACCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGTTATAAAGCACCATAATATGGCTGTAAATATTAACATTAACCTAA  800

seq1  CAAAGTTATAGTCTCCATTAGTTTCACACTGAGGTATATGCAGTCTTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTATAGTCTCCATTAGTTTCACACTGAGGTATATGCAGTCTTTGA  850

seq1  TGTAAATACAGCATTCAGAGATGCGTCTTCATAGTCTTAGTTATTAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATACAGCATTCAGAGATGCGTCTTCATAGTCTTAGTTATTAATGT  900

seq1  TACCCCTTAGGTTTCATTGAAACATGAAGACAGGATTGCAGCAATGTACA  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||| 
seq2  TACCCCTTA-GTTTCATTGAAACATGAAGACAGGATTGCAGCAATGTAC-  948

seq1  ATAGAGGAGAAGATATATAGTAGGTTCTGTTAACCCTGAGTGTTGTCAGA  1000
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  ATAGAGGAGAAGATATATAGTA-GTTCTGTTAACCCTGAGTG-TGTCAGA  996

seq1  GAAAAACAATTCTACAATGTTGGAAAGCTTTTTAAAATA-TTACATCTTG  1049
      ||||||| ||||||| ||||||||||||||||||||||| ||||||| ||
seq2  GAAAAAC-ATTCTAC-ATGTTGGAAAGCTTTTTAAAATATTTACATC-TG  1043

seq1  ACCAAGAGATGGACTTTGATCACTTCCTACTGCCAGTTTTATAAGCCCTT  1099
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCAGGAGATGGACTTTGATCACTTTCTACTGCCAGTTTTATAAGCCCTT  1093

seq1  GTCGTTTTCTGTGAGGCTTTATT-ATTTTCCTAAGTCATGCAACCTGCAG  1148
      |||||||| ||||| |||||||| | ||| ||||||||||||  ||||  
seq2  GTCGTTTTTTGTGA-GCTTTATTAAATTTTCTAAGTCATGCA--CTGCGA  1140

seq1  AGCTGCAAGAA--GATACCTGGTTCTTGGGCTGGTGGTGGGGTTAATTTT  1196
      |||||||||||   ||||||||||| ||| |||||||||||  |||||||
seq2  AGCTGCAAGAAAGAATACCTGGTTC-TGGCCTGGTGGTGGG--TAATTTT  1187

seq1  TGGCATTTCAGCAGGAGGGAGAAAGCATTCAG  1228
      ||||| ||||   |||||  ||||||||||||
seq2  TGGCA-TTCA--CGGAGG--GAAAGCATTCAG  1214

seq1: chr4_147054124_147055268
seq2: B6Ng01-151G19.g_67_1186 (reverse)

seq1  TACAGTGCACTTACATATAATAAATAAATAAAGTATTTTAAAAAATGGTG  50
      |||||||| ||   |||||||||||| |       |||||||||||||||
seq2  TACAGTGC-CT--AATATAATAAATATA------GTTTTAAAAAATGGTG  41

seq1  GAATCTGATATAATTCATTTTCCTTCTGGAGCAGATTTCTTGTTTGATGG  100
      ||   |||||||| ||||||  ||    ||||||||||||   |||||||
seq2  GA--TTGATATAA-TCATTTCTCT----GAGCAGATTTCT--GTTGATGG  82

seq1  GATGCTGGATAACAGCGTTTTCATGTATTATAAATTCCTTCACAATTACG  150
      |||||| ||| ||||||||||||||||||||||||| |||||||| ||| 
seq2  GATGCT-GAT-ACAGCGTTTTCATGTATTATAAATT-CTTCACAA-TAC-  127

seq1  GTGCCTCCTCAG-AAAAGTTAATACCTAAATACAGCATTGATAGGATAAA  199
      ||||   ||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGC--TCTCAGAAAAAGTTAATACCTAAATACAGCATTGATAGGATAAA  175

seq1  TCTTTTCCCACATTACAATGAACACATAAGAGTCTCCAGCTCTGGGTTCC  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TTTCCCACATTACAATGAACACATAAGAGTCTCCAGCTCTGGGTTCC  224

seq1  ACAGATACAAAACATTTTTATCATACATAGGGATCATTCCTAACTGTTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATACAAAACATTTTTATCATACATAGGGATCATTCCTAACTGTTAA  274

seq1  AATGTTGATATGAGGGGTCAGCGGTACTGAAACTCATTCAGGCTTCACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGATATGAGGGGTCAGCGGTACTGAAACTCATTCAGGCTTCACAT  324

seq1  TTCCTCTCATTCTCTTTCCTGGATGGTTTCTTGTGTCCTATGTAATATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCATTCTCTTTCCTGGATGGTTTCTTGTGTCCTATGTAATATTT  374

seq1  CCAGATCATTTATAATTTTAAAATAATGTTTATTGACTTTAATTTCATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCATTTATAATTTTAAAATAATGTTTATTGACTTTAATTTCATAT  424

seq1  GGAATGTTATTTTTGCTGGCACGTAGCTCTGTTCACATGAGAAATGCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTATTTTTGCTGGCACGTAGCTCTGTTCACATGAGAAATGCAGG  474

seq1  CTATGGTAAAACATATTCTCAAAAAAAAGAGTTCTGGAAGGAAAAGAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTAAAACATATTCTCAAAAAAAAGAGTTCTGGAAGGAAAAGAAGT  524

seq1  CCCCAGGCAGGTACAGAAAACTGAATCTGAATACTGCAAGAAGAAGAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCAGGTACAGAAAACTGAATCTGAATACTGCAAGAAGAAGAGAC  574

seq1  CTTAACTGCAGAGCCACATCTTTGACTCTTAATTAGCTCCTGTGGAGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTGCAGAGCCACATCTTTGACTCTTAATTAGCTCCTGTGGAGACA  624

seq1  TAAATAAATATGCTTAATAACAATTTCTCTAATACCATATGGTCTTTCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATATGCTTAATAACAATTTCTCTAATACCATATGGTCTTTCAC  674

seq1  TATAAAATGATTAGCTATGTATGTTTAAGCAAATATCATATGTGGCAATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGATTAGCTATGTATGTTTAAGCAAATATCATATGTGGCAATG  724

seq1  CATTCCAATGAAGTAAAATAATTTTTGAACAAACTGTGTTTTTAAATTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAATGAAGTAAAATAATTTTTGAACAAACTGTGTTTTTAAATTGA  774

seq1  GGGAGAATTATACTAAATATTCATTAAAATTTAATAAATTATTCCTCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAATTATACTAAATATTCATTAAAATTTAATAAATTATTCCTCATT  824

seq1  GTATTAACCTAACTGAAAATTTCAGTCTTCTAATTATAACTTTTTTCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAACCTAACTGAAAATTTCAGTCTTCTAATTATAACTTTTTTCTTC  874

seq1  AGAATTTGACCATATGTATATCATAATTACACTTTTCATAGAGAAGTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTGACCATATGTATATCATAATTACACTTTTCATAGAGAAGTGTG  924

seq1  ATCTATCATTCTTCTTTTGTTTATCAAAAATTATAATATACAGACAATAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCATTCTTCTTTTGTTTATCAAAAATTATAATATACAGACAATAT  974

seq1  ACTGTCTTTGTTGCAAATATGCCTCAAAAATGCAAAACCTGTGCCATGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTTTGTTGCAAATATGCCTCAAAAATGCAAAACCTGTGCCATGAA  1024

seq1  CAAATGACTAAAGGGGAAAGGTACTTGCTGTTTCTACTTTAAAAACTAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACTAAAGGGGAAAGGTACTTGCTGTTTCTACTTTAAAAACTAAT  1074

seq1  CTAATTGTCTCTAAATATATTGCAGCTCACTATGATGTCTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGTCTCTAAATATATTGCAGCTCACTATGATGTCTGAATTC  1120