BAC Information

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BAC

Clone NameB6Ng01-151H20
Chromosome4 (Build37)
Map Location 114,574,278 - 114,747,207
singlet/doubletdoublet
Overlap geneFoxd2, LOC100040736, Foxe3, Cmpk, Stil, Tal1
Upstream geneLOC242627, LOC100040625, A630098G03Rik, LOC666048
Downstream genePdzk1ip1, Cyp4x1, Cyp4a21-ps, LOC384042, LOC230639, Cyp4a12, LOC546842, Cyp4a12b, LOC435802, LOC666393, LOC230641, Cyp4a14, Cyp4a10, LOC666168, LOC631037, LOC100040843, Cyp4b1, LOC546843, 4732418C07Rik, 4930544O15Rik, Atpaf1, Mobkl2c, Mknk1, Kncn, 6430628N08Rik, Dmbx1, Faah, Nsun4, Uqcrh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151H20.bB6Ng01-151H20.g
ACCDH947295DH947296
length1,095604
definitionDH947295|Mus musculus domesticus DNA, BAC clone: B6Ng01-151H20, 5' end.DH947296|Mus musculus domesticus DNA, BAC clone: B6Ng01-151H20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,746,091 - 114,747,207)(114,574,278 - 114,574,881)
sequence
gaattcacacctacttcaccttgctcaagccccttccaactcagggcttt
gtgtcacctcccctgggtaaccctttacttagattcatgacaattaagct
ctgtgaataggtaacaggtttacatgggcaggggggtgtgtccgggtagg
gggtgcgaggaagctaatgacacagtgacagcttctgaggaacacacact
tattttattaaaaaggaagcaggtagggaccggcgtgaggaggccagaca
gctgactggatccatagcctccatgcctggtcttcaccactctataccag
cctttcaggtccttgccagatgccaggtcagacgccaggcccagagagaa
aatagagagccagtgggaggagaagggctgttcatggccagtggggaaag
aaccgagtgtctgtaccctaaggtgctggtgcagagggcttaatcagact
tggtttcagctctgaggggtttgtgtttcagtgaagaagcaactaaataa
gcaaatgttagggcaggaagggccagcatacctggggtcccatggggatg
caaaggaggcacccagtcccatggagtcaggaaaacttcctggacttcag
ggacaattcaaccaaatgagagtgggcaaagaggaagatgggctgttatg
tgaaaaataaaccaaaattcaacatctgggagtcaaaaaccaataaaaca
gtctaaaacaaaaaggaagaaagctagtacggtaggcacaaaagagtgag
gcgtggggtggggatgcagtctggttgtagagtgcttgcctaatatgcac
aaagctctggatttagctcctgtcactgaataaacctggtattctagtgc
acacctgtaatcccagcactctggagacagaggcaggaagatcggaagtt
caaagtcagcctcagcaacttagtgggtttgaggccacatgagaccctgt
ttcagaaaacaatagcaaacacacacacacaccacacacacacacaaatg
agtggtaggaaataaggtacagatcagccaaacactcagcagcctcagca
cttttcttccctgtgagtcagattctggctcaaacaacattttct
ttctctccagtcccaagcaagattcatggaaccccaattccaaagatatt
tcagcctcaatagacaaaagtaacccagggtgagccaaccctgagacaat
ttccaccttccgaggaaactgagcagaccctgctgttgctgaaactcgca
gaaccccaacatccgagaccgagtgcatccttcccagttgtgcacacagc
cgagtctagtgcgggtttaccgagattctagggtctacgaaagattgggc
agggatagaagggtgatgaagactcccaccgacggagttcctctcggacc
acgaaatttagaccaacaatgagaagggaaagtgaacatggagaaaggtt
taccgggaggaaaacccagctgatggagaaacgcgcggagcagcgactgc
gagccatttctgctcgagtccgcgtggagcgaaaagaccaagttgggaag
ggacccctgcacagagcactgagcccaacgatggttggaaacaatcccga
ggaggtggccagcagccgaactcaaagcagaagccttccttctcgggctg
acccaagcctcccaggtctagcgcggctgcggtggtgtagcagtgcagcg
cggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_114746091_114747207
seq2: B6Ng01-151H20.b_44_1138 (reverse)

seq1  AGAAAATGTTGTCTCTGAAGCCCAGAATCCCTGACTCCACAAGGGAAGAA  50
      |||||||||||| |  |    |||||||  |||||| ||| |||||||||
seq2  AGAAAATGTTGTTTGAG----CCAGAAT--CTGACT-CAC-AGGGAAGAA  42

seq1  AAGTGCCCTGAGGCCTGGCCTGAGGTGTTTTGCTGATCTGTTCCCCTTTA  100
      |||||  |||||| |||  |||| |||||| |||||||||| ||   |||
seq2  AAGTG--CTGAGG-CTG--CTGA-GTGTTTGGCTGATCTGTACC---TTA  83

seq1  TTTCTTACCACTCCATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGC  150
      |||| ||||||| |||||||||||||||||| ||||||||||||||||||
seq2  TTTCCTACCACT-CATTTGTGTGTGTGTGTG-GTGTGTGTGTGTGTTTGC  131

seq1  TTATTTGTTTTTCTGAAACAGGGTCTCATGTGGCCTCAAACCCACTAAGT  200
       ||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  -TATT--GTTTTCTGAAACAGGGTCTCATGTGGCCTCAAACCCACTAAGT  178

seq1  TGCTGAGGCTGACTTTGAACTTCCGATCTTCCTGCCTCTGTCTCCAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGCTGACTTTGAACTTCCGATCTTCCTGCCTCTGTCTCCAGAGT  228

seq1  GCTGGGATTACAGGTGTGCACTAGAATACCAGGTTTATTCAGTGACAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTACAGGTGTGCACTAGAATACCAGGTTTATTCAGTGACAGGA  278

seq1  GCTAAATCCAGAGCTTTGTGCATATTAGGCAAGCACTCTACAACCAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATCCAGAGCTTTGTGCATATTAGGCAAGCACTCTACAACCAGACT  328

seq1  GCATCCCCACCCCACGCCTCACTCTTTTGTGCCTACCGTACTAGCTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCCACCCCACGCCTCACTCTTTTGTGCCTACCGTACTAGCTTTCT  378

seq1  TCCTTTTTGTTTTAGACTGTTTTATTGGTTTTTGACTCCCAGATGTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTGTTTTAGACTGTTTTATTGGTTTTTGACTCCCAGATGTTGAA  428

seq1  TTTTGGTTTATTTTTCACATAACAGCCCATCTTCCTCTTTGCCCACTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTATTTTTCACATAACAGCCCATCTTCCTCTTTGCCCACTCTC  478

seq1  ATTTGGTTGAATTGTCCCTGAAGTCCAGGAAGTTTTCCTGACTCCATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTGAATTGTCCCTGAAGTCCAGGAAGTTTTCCTGACTCCATGGG  528

seq1  ACTGGGTGCCTCCTTTGCATCCCCATGGGACCCCAGGTATGCTGGCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGCCTCCTTTGCATCCCCATGGGACCCCAGGTATGCTGGCCCTT  578

seq1  CCTGCCCTAACATTTGCTTATTTAGTTGCTTCTTCACTGAAACACAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCTAACATTTGCTTATTTAGTTGCTTCTTCACTGAAACACAAACC  628

seq1  CCTCAGAGCTGAAACCAAGTCTGATTAAGCCCTCTGCACCAGCACCTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAGCTGAAACCAAGTCTGATTAAGCCCTCTGCACCAGCACCTTAG  678

seq1  GGTACAGACACTCGGTTCTTTCCCCACTGGCCATGAACAGCCCTTCTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGACACTCGGTTCTTTCCCCACTGGCCATGAACAGCCCTTCTCCT  728

seq1  CCCACTGGCTCTCTATTTTCTCTCTGGGCCTGGCGTCTGACCTGGCATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGGCTCTCTATTTTCTCTCTGGGCCTGGCGTCTGACCTGGCATCT  778

seq1  GGCAAGGACCTGAAAGGCTGGTATAGAGTGGTGAAGACCAGGCATGGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGACCTGAAAGGCTGGTATAGAGTGGTGAAGACCAGGCATGGAGG  828

seq1  CTATGGATCCAGTCAGCTGTCTGGCCTCCTCACGCCGGTCCCTACCTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGATCCAGTCAGCTGTCTGGCCTCCTCACGCCGGTCCCTACCTGCT  878

seq1  TCCTTTTTAATAAAATAAGTGTGTGTTCCTCAGAAGCTGTCACTGTGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTAATAAAATAAGTGTGTGTTCCTCAGAAGCTGTCACTGTGTCA  928

seq1  TTAGCTTCCTCGCACCCCCTACCCGGACACACCCCCCTGCCCATGTAAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCCTCGCACCCCCTACCCGGACACACCCCCCTGCCCATGTAAAC  978

seq1  CTGTTACCTATTCACAGAGCTTAATTGTCATGAATCTAAGTAAAGGGTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACCTATTCACAGAGCTTAATTGTCATGAATCTAAGTAAAGGGTTA  1028

seq1  CCCAGGGGAGGTGACACAAAGCCCTGAGTTGGAAGGGGCTTGAGCAAGGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGAGGTGACACAAAGCCCTGAGTTGGAAGGGGCTTGAGCAAGGT  1078

seq1  GAAGTAGGTGTGAATTC  1117
      |||||||||||||||||
seq2  GAAGTAGGTGTGAATTC  1095

seq1: chr4_114574278_114574881
seq2: B6Ng01-151H20.g_76_679

seq1  TTCTCTCCAGTCCCAAGCAAGATTCATGGAACCCCAATTCCAAAGATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCCAGTCCCAAGCAAGATTCATGGAACCCCAATTCCAAAGATATT  50

seq1  TCAGCCTCAATAGACAAAAGTAACCCAGGGTGAGCCAACCCTGAGACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCAATAGACAAAAGTAACCCAGGGTGAGCCAACCCTGAGACAAT  100

seq1  TTCCACCTTCCGAGGAAACTGAGCAGACCCTGCTGTTGCTGAAACTCGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTTCCGAGGAAACTGAGCAGACCCTGCTGTTGCTGAAACTCGCA  150

seq1  GAACCCCAACATCCGAGACCGAGTGCATCCTTCCCAGTTGTGCACACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCAACATCCGAGACCGAGTGCATCCTTCCCAGTTGTGCACACAGC  200

seq1  CGAGTCTAGTGCGGGTTTACCGAGATTCTAGGGTCTACGAAAGATTGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCTAGTGCGGGTTTACCGAGATTCTAGGGTCTACGAAAGATTGGGC  250

seq1  AGGGATAGAAGGGTGATGAAGACTCCCACCGACGGAGTTCCTCTCGGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAGAAGGGTGATGAAGACTCCCACCGACGGAGTTCCTCTCGGACC  300

seq1  ACGAAATTTAGACCAACAATGAGAAGGGAAAGTGAACATGGAGAAAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAATTTAGACCAACAATGAGAAGGGAAAGTGAACATGGAGAAAGGTT  350

seq1  TACCGGGAGGAAAACCCAGCTGATGGAGAAACGCGCGGAGCAGCGACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGGGAGGAAAACCCAGCTGATGGAGAAACGCGCGGAGCAGCGACTGC  400

seq1  GAGCCATTTCTGCTCGAGTCCGCGTGGAGCGAAAAGACCAAGTTGGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATTTCTGCTCGAGTCCGCGTGGAGCGAAAAGACCAAGTTGGGAAG  450

seq1  GGACCCCTGCACAGAGCACTGAGCCCAACGATGGTTGGAAACAATCCCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCTGCACAGAGCACTGAGCCCAACGATGGTTGGAAACAATCCCGA  500

seq1  GGAGGTGGCCAGCAGCCGAACTCAAAGCAGAAGCCTTCCTTCTCGGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGGCCAGCAGCCGAACTCAAAGCAGAAGCCTTCCTTCTCGGGCTG  550

seq1  ACCCAAGCCTCCCAGGTCTAGCGCGGCTGCGGTGGTGTAGCAGTGCAGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCCTCCCAGGTCTAGCGCGGCTGCGGTGGTGTAGCAGTGCAGCG  600

seq1  CGGG  604
      ||||
seq2  CGGG  604