BAC Information

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BAC

Clone NameB6Ng01-151N24
Chromosome4 (Build37)
Map Location 57,383,190 - 57,584,224
singlet/doubletdoublet
Overlap geneLOC100041342, LOC619973, LOC667049, Palm2
Upstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik
Downstream geneLOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8, Svep1, Musk, Edg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151N24.bB6Ng01-151N24.g
ACCDH947587DH947588
length1,027632
definitionDH947587|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N24, 5' end.DH947588|Mus musculus domesticus DNA, BAC clone: B6Ng01-151N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,583,198 - 57,584,224)(57,383,190 - 57,383,822)
sequence
gaattcctcctcctcactcactttgctgccagaagcacttgtcggttctt
aggtctagatagctgtgtgaatattcctagagatgaaagggccaagaagg
aggaaagacactctccaaggatggagttgctcttcttttgatagggcaca
gagccttccaatcgcatttgattagtctccggcctgacttagtagattcg
gttgaggcactatacccagttagtaacccacactggatgcttcccacaga
tgatcatgcagcagacatcctgggtgacctgggtgacacctgacctttca
aacactaagcttggggctgggagtggaggcacacacttttaatcccagaa
ctccagaagctgacaagtgggtcactgtgaactcaaggtcaggccagtct
gcatagtgtgttccaggccgaacagggctccataatgagacacccacccc
cttttaaaactaaacattcagggacaagaccttcctctggctgtcaacag
cactagtaatccctaggggagagacactccacagaaacctgctgagtgag
caggtgagtgggccctcaggtcccagtcagggctgtagagggagggattt
cagagttgaaatggaaaacagagctgccccgtgccttttcagcagcgtag
acaagagctgaggcctccacatgaacatcaccccatggcaaatgtgggcc
aaagtgcttcactttcctagtcttcaaaagcagagataaactcctgggcc
tattttatagagaaaaaaaacctgaggctcagacacaagactgagcaaca
cccaggaacccaagtaagtgaagatgtgaagaattattctcttccccttt
atctccagagggacttcatgcatgttaagccttggggaaagatcgtgagt
gtctcagaaccccctgggaatctgggaaagggccaagagaggcaaagttt
gctgaatccggaaagcatgcggactaagcccaaatgtggcataaaattat
gtactgattgtagccacaaagttcacc
gaattctctaaggttatcctcacacaaaacaagagacattcacttgtttt
tagacagctctgtactataattgtcaaataagaaaactattaaaaggaat
agatagaaaaataatagtgatgatgatgatggtggtaatggtgctatcag
ttagctaatgggacatattaaaagggcacatcagtttgttctttcatttc
gttcccaaactgtcccacaacatagacaatgctctcatgttaagggaaag
ccattttttaagacacatcaatacgatgttcatattctggaagttataag
ttggagaacataaattgaaatatgtttcatgttttcccaaatccattctc
tttggtgtggttcttgcattctggaagtttcccctgggtttgaaaatggc
catctgtgattctcagtttgttatattctttttttttttttttttttttt
tttttgggtgcagcgaactttattgatggtattcaagagagtagggaggg
ctccctaggcccctcctgttattatgggggtctgggatggaaattgtgag
ggagatgctcagtgttgggggccgagtttggataggggctttctcttgct
cagtgtccttggtgggtgggtgggccaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_57583198_57584224
seq2: B6Ng01-151N24.b_48_1074 (reverse)

seq1  GGTGAAC-TTGTGGCTACAATCAGTACATAATTTTATGCCACATTTTGGC  49
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  GGTGAACTTTGTGGCTACAATCAGTACATAATTTTATGCCACATTTGGGC  50

seq1  TTAGTCCGCATGCTTTCCGGATTCAGCAAACTTTGCCTCTCTTGGCCCTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCGCATGCTTTCCGGATTCAGCAAACTTTGCCTCTCTTGGCCCTT  100

seq1  TCCCAGAATTCCCAGGGGGTTCTGAGACACTCACGATCTTTCCCCAAGGC  149
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAG-ATTCCCAGGGGGTTCTGAGACACTCACGATCTTTCCCCAAGGC  149

seq1  TTAACATGCATGAAGTCCCTCTGGAGATAAAGGGGAAGAGAATAATTCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGCATGAAGTCCCTCTGGAGATAAAGGGGAAGAGAATAATTCTT  199

seq1  CACATCTTCACTTACTTGGGTTCCTGGGTGTTGCTCAGTCTTGTGTCTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTTCACTTACTTGGGTTCCTGGGTGTTGCTCAGTCTTGTGTCTGA  249

seq1  GCCTCAGGTTTTTTTTCTCTATAAAATAGGCCCAGGAGTTTATCTCTGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGTTTTTTTTCTCTATAAAATAGGCCCAGGAGTTTATCTCTGCT  299

seq1  TTTGAAGACTAGGAAAGTGAAGCACTTTGGCCCACATTTGCCATGGGGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGACTAGGAAAGTGAAGCACTTTGGCCCACATTTGCCATGGGGTG  349

seq1  ATGTTCATGTGGAGGCCTCAGCTCTTGTCTACGCTGCTGAAAAGGCACGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATGTGGAGGCCTCAGCTCTTGTCTACGCTGCTGAAAAGGCACGG  399

seq1  GGCAGCTCTGTTTTCCATTTCAACTCTGAAATCCCTCCCTCTACAGCCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTCTGTTTTCCATTTCAACTCTGAAATCCCTCCCTCTACAGCCCT  449

seq1  GACTGGGACCTGAGGGCCCACTCACCTGCTCACTCAGCAGGTTTCTGTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGACCTGAGGGCCCACTCACCTGCTCACTCAGCAGGTTTCTGTGG  499

seq1  AGTGTCTCTCCCCTAGGGATTACTAGTGCTGTTGACAGCCAGAGGAAGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCTCCCCTAGGGATTACTAGTGCTGTTGACAGCCAGAGGAAGGT  549

seq1  CTTGTCCCTGAATGTTTAGTTTTAAAAGGGGGTGGGTGTCTCATTATGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCCTGAATGTTTAGTTTTAAAAGGGGGTGGGTGTCTCATTATGGA  599

seq1  GCCCTGTTCGGCCTGGAACACACTATGCAGACTGGCCTGACCTTGAGTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTTCGGCCTGGAACACACTATGCAGACTGGCCTGACCTTGAGTTC  649

seq1  ACAGTGACCCACTTGTCAGCTTCTGGAGTTCTGGGATTAAAAGTGTGTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGACCCACTTGTCAGCTTCTGGAGTTCTGGGATTAAAAGTGTGTGC  699

seq1  CTCCACTCCCAGCCCCAAGCTTAGTGTTTGAAAGGTCAGGTGTCACCCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCCCAGCCCCAAGCTTAGTGTTTGAAAGGTCAGGTGTCACCCAG  749

seq1  GTCACCCAGGATGTCTGCTGCATGATCATCTGTGGGAAGCATCCAGTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCCAGGATGTCTGCTGCATGATCATCTGTGGGAAGCATCCAGTGTG  799

seq1  GGTTACTAACTGGGTATAGTGCCTCAACCGAATCTACTAAGTCAGGCCGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTAACTGGGTATAGTGCCTCAACCGAATCTACTAAGTCAGGCCGG  849

seq1  AGACTAATCAAATGCGATTGGAAGGCTCTGTGCCCTATCAAAAGAAGAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAATCAAATGCGATTGGAAGGCTCTGTGCCCTATCAAAAGAAGAGC  899

seq1  AACTCCATCCTTGGAGAGTGTCTTTCCTCCTTCTTGGCCCTTTCATCTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATCCTTGGAGAGTGTCTTTCCTCCTTCTTGGCCCTTTCATCTCT  949

seq1  AGGAATATTCACACAGCTATCTAGACCTAAGAACCGACAAGTGCTTCTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATTCACACAGCTATCTAGACCTAAGAACCGACAAGTGCTTCTGG  999

seq1  CAGCAAAGTGAGTGAGGAGGAGGAATTC  1027
      ||||||||||||||||||||||||||||
seq2  CAGCAAAGTGAGTGAGGAGGAGGAATTC  1027

seq1: chr4_57383190_57383822
seq2: B6Ng01-151N24.g_66_697

seq1  GAATTCTCTAAGGTTATCCTCACACAAAACAAGAGACATTCACTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGGTTATCCTCACACAAAACAAGAGACATTCACTTGTTTT  50

seq1  TAGACAGCTCTGTACTATAATTGTCAAATAAGAAAACTATTAAAAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGCTCTGTACTATAATTGTCAAATAAGAAAACTATTAAAAGGAAT  100

seq1  AGATAGAAAAATAATAGTGATGATGATGATGGTGGTAATGGTGCTATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAAATAATAGTGATGATGATGATGGTGGTAATGGTGCTATCAG  150

seq1  TTAGCTAATGGGACATATTAAAAGGGCACATCAGTTTGTTCTTTCATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTAATGGGACATATTAAAAGGGCACATCAGTTTGTTCTTTCATTTC  200

seq1  GTTCCCAAACTGTCCCACAACATAGACAATGCTCTCATGTTAAGGGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAAACTGTCCCACAACATAGACAATGCTCTCATGTTAAGGGAAAG  250

seq1  CCATTTTTTAAGACACATCAATACGATGTTCATATTCTGGAAGTTATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTAAGACACATCAATACGATGTTCATATTCTGGAAGTTATAAG  300

seq1  TTGGAGAACATAAATTGAAATATGTTTCATGTTTTCCCAAATCCATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAACATAAATTGAAATATGTTTCATGTTTTCCCAAATCCATTCTC  350

seq1  TTTGGTGTGGTTCTTGCATTCTGGAAGTTTCCCCTGGGTTTGAAAATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTGGTTCTTGCATTCTGGAAGTTTCCCCTGGGTTTGAAAATGGC  400

seq1  CATCTGTGATTCTCAGTTTGTTATATTCTTTTTTTTTTTTTTTTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGATTCTCAGTTTGTTATATTCTTTTTTTTTTTTTTTTTTTTTT  450

seq1  TTTTTGGGTGCAGCGAACTTTATTGATGGTATTCAAGAGAGTAGGGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGTGCAGCGAACTTTATTGATGGTATTCAAGAGAGTAGGGAGGG  500

seq1  CTCCCTAGGCCCCTCCTGTTATTATGGGGGTCTGGGATGGAAATTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGGCCCCTCCTGTTATTATGGGGGTCTGGGATGGAAATTGTGAG  550

seq1  GGAGATGCTCAGTGTTGGGGGCCGAGTTGGGATAGGGCCTTTCTCTTGCT  600
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  GGAGATGCTCAGTGTTGGGGGCCGAGTTTGGATAGGGGCTTTCTCTTGCT  600

seq1  CAGTGTCCTTGCTGGGGTGGGTGGTCCAGGGTT  633
      ||||||||||| | |||||||||| |||||| |
seq2  CAGTGTCCTTGGT-GGGTGGGTGGGCCAGGGGT  632