BAC Information

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BAC

Clone NameB6Ng01-152B04
Chromosome4 (Build37)
Map Location 145,122,003 - 145,123,002
singlet/doubletsinglet
Overlap geneLOC622846
Upstream geneLOC666194, LOC627085, LOC666215, LOC435815, Gm436, LOC546849, Gm438, LOC666242, LOC676844, Dhrs3, Vps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576
Downstream geneLOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152B04.b
ACCDH947738
length1,046
definitionDH947738|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B04, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccggatcttaccgggctgcttgccatttagggaggaagcaatttg
tttatgcgttctccaccaagtacctttccccttgtggttttgttcattcc
gtgggtttacatttttgaggtgtttagcaatatccacaatacatagcctg
tacgttacaattatagaaaaacaacaggggaatgatggatgcacttctct
atgaaaagtgggattctgatatacatatggtcaaattcagaagaagcagg
ttattatttaaagaatgaagttttttaggttaatacaatgagaaataatt
tattaaattttaatgaatatttagtatgattctccctcaattgaaaaaca
cacttagatcaaaaattattatacttcattggaatgcattgccacatatg
atatttgcttatacacacatatctaatcattttatagtgaaagaccaggt
ggtgtgaatgaaattgttagtaagcatgttgattaaagtcttaattaccg
cattaatagccaaaggggtggttctacagttaaggtctcttcttcttgct
tgattcagattcagttttctgtacctgcctggggacttcttttccttccc
aactcttttttttctagaatatcttttaccattgcctgcgtttctcatgt
gcacagagctacgtgccgatcaaaataacatgtccatatgaaattaaagt
caacaaacaatatttgatacttactctgatctgcaaatattacataggac
acaagaaaccatccaggaaagagaatgagaggaaatgtgtacgcctgatg
agtttcagtaccactgaccccctcatatcaacattttaacaatacgcatg
atccctatgtatgataaaatgtctgtatctgtggaacctagagctggaga
ctcttatgtgttcattgtaatgacggagaagttgtatctatcatctgtat
ttagtattagctttctgacgaggaacgtaattgtgaagaatttttgatac
agacacgctgtagcgagcatccatcacagaaattgctcagagaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145122003_145123002
seq2: B6Ng01-152B04.b_107_1086

seq1  CAAGTACCTTTCCCCTT-TAGTCATTTGTTCATTCCACGGGTTTACATTT  49
      ||||||||||||||||| | ||  ||||||||||||  ||||||||||||
seq2  CAAGTACCTTTCCCCTTGTGGT--TTTGTTCATTCCGTGGGTTTACATTT  48

seq1  TTGAGGTATATTTGCAATAAAGACAATATATTGTCTGTACATTATAATTT  99
      ||||||| | || ||||||   |||||| || | |||||| ||| |||| 
seq2  TTGAGGTGT-TTAGCAATATCCACAATACATAGCCTGTACGTTACAATTA  97

seq1  TTGATAAACAAAAGAAGAATGATAGATCACACTTCTCTATGAAAAGTGCA  149
      | || |||||| ||  ||||||| |||  |||||||||||||||||||  
seq2  TAGAAAAACAACAGGGGAATGATGGAT-GCACTTCTCTATGAAAAGTGGG  146

seq1  ATTCTGATATACATATGGTCAAATTCTGAAGAAAAAGGTTATAATTAGAA  199
      |||||||||||||||||||||||||| ||||||  ||||||| |||  ||
seq2  ATTCTGATATACATATGGTCAAATTCAGAAGAAGCAGGTTATTATTTAAA  196

seq1  GACTGAAATTTTTTAGGTTAATACAATGAGAAATAATTTATTAAATTTTA  249
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGTTTTTTAGGTTAATACAATGAGAAATAATTTATTAAATTTTA  246

seq1  ATGAATATTTAGTATAATTCTCCCTCAATTTAAAAACACAATTTGATCAA  299
      ||||||||||||||| |||||||||||||| ||||||||| || ||||||
seq2  ATGAATATTTAGTATGATTCTCCCTCAATTGAAAAACACACTTAGATCAA  296

seq1  AAATTATTATACTTCATTGGAATGCATTGCCACATATGATATTTGCTTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTATACTTCATTGGAATGCATTGCCACATATGATATTTGCTTAT  346

seq1  ACACACATATCTAATCATTTTATAGTGAAAGACCATATGGTATTAATGAA  399
      |||||||||||||||||||||||||||||||||||  |||| | ||||||
seq2  ACACACATATCTAATCATTTTATAGTGAAAGACCAGGTGGTGTGAATGAA  396

seq1  ATTATTATTAAGCATATTGATTTATGTCTTAATTAGCTAATTAAGAGTCA  449
      ||| ||| ||||||| |||||| | |||||||||| |  ||||| || ||
seq2  ATTGTTAGTAAGCATGTTGATTAAAGTCTTAATTACCGCATTAATAGCCA  446

seq1  AAGGTGTGGCTCTGCAGTTAAGGTCTCTTCTTCTTGCAGTATTCAGATTC  499
      |||| |||| ||| |||||||||||||||||||||||   ||||||||||
seq2  AAGGGGTGGTTCTACAGTTAAGGTCTCTTCTTCTTGCTTGATTCAGATTC  496

seq1  AGTTTTCTGTACCTGCCTGGGGACTTCTTTTCCTTCCAGAACTCTTTTTT  549
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  AGTTTTCTGTACCTGCCTGGGGACTTCTTTTCCTTCC-CAACTCTTTTTT  545

seq1  TTCGAGAATATCTTTTACCATTGCCTGCGTTTCTCATGTGCACAGAGCTA  599
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAATATCTTTTACCATTGCCTGCGTTTCTCATGTGCACAGAGCTA  595

seq1  CGTGCCAGCAAAAATAACAT-TCCATATGAAATTAAAGTCAACAAACATT  648
      ||||||    |||||||||| ||||||||||||||||||||||||||| |
seq2  CGTGCCGATCAAAATAACATGTCCATATGAAATTAAAGTCAACAAACAAT  645

seq1  ATTTAAAAATTATTAATGATCTGGAAATATTACATAGGACACAAGAAACC  698
      |||| | | ||| |  ||||||| ||||||||||||||||||||||||||
seq2  ATTTGATACTTACT-CTGATCTGCAAATATTACATAGGACACAAGAAACC  694

seq1  ATCCAGGAAAGAGAATGAGAGGAAATGTG-AAGCCTGAATGAGTTTCAGT  747
      ||||||||||||||||||||||||||||| | ||||| ||||||||||||
seq2  ATCCAGGAAAGAGAATGAGAGGAAATGTGTACGCCTG-ATGAGTTTCAGT  743

seq1  ACCGCTGA-CCCCTCATATCAACATTTTAACAATTAGGAATGATCCCTAT  796
      ||| |||| |||||||||||||||||||||||| || | |||||||||||
seq2  ACCACTGACCCCCTCATATCAACATTTTAACAA-TACGCATGATCCCTAT  792

seq1  GTATGATAAAAATGTTTTGTATCTGTGGAACCCAGAGCTGGAGACTCTTA  846
      ||||||| |||||| | ||||||||||||||| |||||||||||||||||
seq2  GTATGAT-AAAATG-TCTGTATCTGTGGAACCTAGAGCTGGAGACTCTTA  840

seq1  TGTGTTCATTGTAATGTCGGAAAAGATTTATCCTATCAATCTGTATTTAG  896
      |||||||||||||||| |||| ||| | ||| ||||| ||||||||||| 
seq2  TGTGTTCATTGTAATGACGGAGAAGTTGTAT-CTATC-ATCTGTATTTA-  887

seq1  GTATTAACTTTTCTGAGGAGGCACCGTAATTGTGAAGGAATTTATGATAC  946
      |||||| | ||||||| |||| | |||||||||||| |||||| ||||||
seq2  GTATTAGC-TTTCTGACGAGG-AACGTAATTGTGAA-GAATTTTTGATAC  934

seq1  AAGAAACGCTGTTATCCAGCATCCCATCAAACAAGAAATTGCTCCAGAAG  996
       ||| |||||| || | ||||| ||||||    |||||||||| ||| ||
seq2  -AGACACGCTG-TAGCGAGCAT-CCATCA---CAGAAATTGCT-CAG-AG  976

seq1  AAAA  1000
      ||||
seq2  AAAA  980