BAC Information

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BAC

Clone NameB6Ng01-152C13
Chromosome4 (Build37)
Map Location 149,718,214 - 149,919,769
singlet/doubletdoublet
Overlap geneRere
Upstream geneUbe4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091
Downstream geneSlc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152C13.bB6Ng01-152C13.g
ACCDH947801DH947802
length1,0901,041
definitionDH947801|Mus musculus domesticus DNA, BAC clone: B6Ng01-152C13, 5' end.DH947802|Mus musculus domesticus DNA, BAC clone: B6Ng01-152C13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,918,670 - 149,919,769)(149,718,214 - 149,719,261)
sequence
gaattctaaaggcagaggcagggagaaatctgtaagtttgagtttagccg
ggtccacatagtgagttccatgccagccatggctacatagtgactgctgt
caaaaacaaacaaacaaacaaacaaacaaacaaacaactacaacaaaagt
cagtggacacagaaactacccagctttgtcaaataatggtatcacagaga
tctttttcctgagtagactttcaaaactagcattggactcaaaggaaagt
ttcttttttaaaccctttctttccaataggtgataaaattcagagtattg
gattgataatcctaaattgcttcaagtttactcccttggttaacttccta
gtaatagctgctctggggcagggacagtttatgccatttccttttcaggt
gtttttcttatgcgtgaatacttaagaaaacagctgcttgcacaaatgtg
gaatctgggtaaacacaggtagtacagtaaacactgtccgctctggttat
aagccagaatgctcagactcggcctacagtctggtagagtgagaagaggc
tgactcagaatcgtacaaaacagaaaccacagagacgcggcagggagggg
caaggcaggaggaagcagaactgctcacagcacacccatttgctcagtta
caggaaaggaattcagaggagcaggcatgagcttcaagatgccgcccgca
gcctacttatttcatctcttcctggggctctctggggcactcccaagcca
aggccctacactcagatttcctcatccagtgtacagacacccagatgacc
aataccattctagcacagtgaccacggcttaaaccacatggacaaagcct
agaccagacagcctcctttgtactcagcacagcacccacattggatagga
cctctcacaagtatgaggggaattactgcattccgtttctttggtttaga
atgttcttctcctatttatttgcaaagctgctctcaaatgttttctatgt
cttcactcagagtgacgatttagggttacttaagtaagttccagatgctg
cctgcactgcaaactgctttcctagcggtctcattcactg
gaattccaagtcagctggactacatacacagtgcgggaacaggttgatgg
ctagatgtgtatggagtgtggcttgtgagctctagtgtgctgttggctaa
gtgctttgagcataggaagagtcctgcattagagaaggtgatgatttagt
cagtcgtgttccctctcattttaatgacttaatggcacagccgaggctag
atagtgagactcttgtttaaaaagaaggagaaaaggctgaaaaagcaagc
tgtaaaacttaccgactgtctgagtcagggtttctattcctgcacaaaca
tcttgaccaagaagcatgctttattgcgtgtatgctgatgagcagtttga
atgaaatgtccacgccaaagtctgtcctttcgtagctcatttcgtgcact
tggtgaaagtcactctgttctcttcccacgtaggactgacttgatagcta
atagccagtgtctgctttgttccagaaatcttgctaattctttgggattt
actgtggtgaagagactttgcttgtctgaagcatatgaagtgatacagtt
ttggtagcgtgtggtgttctgaggttgttaggtgactcacagcaagagag
aactaacttgagacccaaaggatggtggctaatctttgttgtcaagttgt
ggaatcaactgggcttaactgtgagggatttccttaattggatcatttga
ggtaagaaaactcaccctaacgcttgaccatgccttctggctgctgccca
atgccacagaaagaagatgggagaaggaagctttgcttttcctgtgcttg
ccttcactctcagtggcactgtctgtcctgttactggtctgtcctgccgt
cccttctctgtcccctccctgctagaacctactttttaggaattctagca
tgcagtgaagaccagcagttcttaggaaccctctgtaactctgcatcaga
cactgagaatgtgaggcatccagtctaatgggagtgaacagttactggat
tctggcctttgctcagaaaaagcattgttgtaccatcagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149918670_149919769
seq2: B6Ng01-152C13.b_45_1134 (reverse)

seq1  CAGTGAAATGAGAAACAGCATAGGAAAGCAGTATGCAGTGCAGGGCAGCA  50
      ||||| ||||||  || || |||||||||||| ||||||||| |||||||
seq2  CAGTG-AATGAG--ACCGC-TAGGAAAGCAGTTTGCAGTGCA-GGCAGCA  45

seq1  CTTGGAACTTTACTTAAGGTAACCCTGAAACGTCACTCTTGAGTGAAGAC  100
        |||||| |||||||| |||||||| || |||||||| |||||||||||
seq2  TCTGGAAC-TTACTTAA-GTAACCCTAAATCGTCACTC-TGAGTGAAGAC  92

seq1  ATAGAAAACATTTGAGAGCCAGCTTTGCAAATAAATAGGAGAAGAACATT  150
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATAGAAAACATTTGAGAG-CAGCTTTGCAAATAAATAGGAGAAGAACATT  141

seq1  CTAAAACCAAAGAAACGGAATGCAGTAATTCCCCTCATACTTGTGAGAGG  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT-AAACCAAAGAAACGGAATGCAGTAATTCCCCTCATACTTGTGAGAGG  190

seq1  TCCTATCCAATGTGGGTGCTGTGCTGAGTACAAAGGAGGCTGTCTGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCCAATGTGGGTGCTGTGCTGAGTACAAAGGAGGCTGTCTGGTCT  240

seq1  AGGCTTTGTCCATGTGGTTTAAGCCGTGGTCACTGTGCTAGAATGGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGTCCATGTGGTTTAAGCCGTGGTCACTGTGCTAGAATGGTATT  290

seq1  GGTCATCTGGGTGTCTGTACACTGGATGAGGAAATCTGAGTGTAGGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTGGGTGTCTGTACACTGGATGAGGAAATCTGAGTGTAGGGCCT  340

seq1  TGGCTTGGGAGTGCCCCAGAGAGCCCCAGGAAGAGATGAAATAAGTAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGGAGTGCCCCAGAGAGCCCCAGGAAGAGATGAAATAAGTAGGC  390

seq1  TGCGGGCGGCATCTTGAAGCTCATGCCTGCTCCTCTGAATTCCTTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGCGGCATCTTGAAGCTCATGCCTGCTCCTCTGAATTCCTTTCCTG  440

seq1  TAACTGAGCAAATGGGTGTGCTGTGAGCAGTTCTGCTTCCTCCTGCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGCAAATGGGTGTGCTGTGAGCAGTTCTGCTTCCTCCTGCCTTG  490

seq1  CCCCTCCCTGCCGCGTCTCTGTGGTTTCTGTTTTGTACGATTCTGAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCTGCCGCGTCTCTGTGGTTTCTGTTTTGTACGATTCTGAGTCA  540

seq1  GCCTCTTCTCACTCTACCAGACTGTAGGCCGAGTCTGAGCATTCTGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCTCACTCTACCAGACTGTAGGCCGAGTCTGAGCATTCTGGCTT  590

seq1  ATAACCAGAGCGGACAGTGTTTACTGTACTACCTGTGTTTACCCAGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGAGCGGACAGTGTTTACTGTACTACCTGTGTTTACCCAGATTC  640

seq1  CACATTTGTGCAAGCAGCTGTTTTCTTAAGTATTCACGCATAAGAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGTGCAAGCAGCTGTTTTCTTAAGTATTCACGCATAAGAAAAAC  690

seq1  ACCTGAAAAGGAAATGGCATAAACTGTCCCTGCCCCAGAGCAGCTATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAAAGGAAATGGCATAAACTGTCCCTGCCCCAGAGCAGCTATTAC  740

seq1  TAGGAAGTTAACCAAGGGAGTAAACTTGAAGCAATTTAGGATTATCAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTTAACCAAGGGAGTAAACTTGAAGCAATTTAGGATTATCAATC  790

seq1  CAATACTCTGAATTTTATCACCTATTGGAAAGAAAGGGTTTAAAAAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTCTGAATTTTATCACCTATTGGAAAGAAAGGGTTTAAAAAAGAA  840

seq1  ACTTTCCTTTGAGTCCAATGCTAGTTTTGAAAGTCTACTCAGGAAAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTTGAGTCCAATGCTAGTTTTGAAAGTCTACTCAGGAAAAAGA  890

seq1  TCTCTGTGATACCATTATTTGACAAAGCTGGGTAGTTTCTGTGTCCACTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGATACCATTATTTGACAAAGCTGGGTAGTTTCTGTGTCCACTG  940

seq1  ACTTTTGTTGTAGTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTTGTAGTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTG  990

seq1  ACAGCAGTCACTATGTAGCCATGGCTGGCATGGAACTCACTATGTGGACC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTCACTATGTAGCCATGGCTGGCATGGAACTCACTATGTGGACC  1040

seq1  CGGCTAAACTCAAACTTACAGATTTCTCCCTGCCTCTGCCTTTAGAATTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTAAACTCAAACTTACAGATTTCTCCCTGCCTCTGCCTTTAGAATTC  1090

seq1: chr4_149718214_149719261
seq2: B6Ng01-152C13.g_67_1107

seq1  GAATTCCAAGTCAGCTGGACTACATACACAGTGCGGGAACAGGTTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTCAGCTGGACTACATACACAGTGCGGGAACAGGTTGATGG  50

seq1  CTAGATGTGTATGGAGTGTGGCTTGTGAGCTCTAGTGTGCTGTTGGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGTGTATGGAGTGTGGCTTGTGAGCTCTAGTGTGCTGTTGGCTAA  100

seq1  GTGCTTTGAGCATAGGAAGAGTCCTGCATTAGAGAAGGTGATGATTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTGAGCATAGGAAGAGTCCTGCATTAGAGAAGGTGATGATTTAGT  150

seq1  CAGTCGTGTTCCCTCTCATTTTAATGACTTAATGGCACAGCCGAGGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGTGTTCCCTCTCATTTTAATGACTTAATGGCACAGCCGAGGCTAG  200

seq1  ATAGTGAGACTCTTGTTTAAAAAGAAGGAGAAAAGGCTGAAAAAGCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAGACTCTTGTTTAAAAAGAAGGAGAAAAGGCTGAAAAAGCAAGC  250

seq1  TGTAAAACTTACCGACTGTCTGAGTCAGGGTTTCTATTCCTGCACAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACTTACCGACTGTCTGAGTCAGGGTTTCTATTCCTGCACAAACA  300

seq1  TCTTGACCAAGAAGCATGCTTTATTGCGTGTATGCTGATGAGCAGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGACCAAGAAGCATGCTTTATTGCGTGTATGCTGATGAGCAGTTTGA  350

seq1  ATGAAATGTCCACGCCAAAGTCTGTCCTTTCGTAGCTCATTTCGTGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGTCCACGCCAAAGTCTGTCCTTTCGTAGCTCATTTCGTGCACT  400

seq1  TGGTGAAAGTCACTCTGTTCTCTTCCCACGTAGGACTGACTTGATAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAAGTCACTCTGTTCTCTTCCCACGTAGGACTGACTTGATAGCTA  450

seq1  ATAGCCAGTGTCTGCTTTGTTCCAGAAATCTTGCTAATTCTTTGGGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGTGTCTGCTTTGTTCCAGAAATCTTGCTAATTCTTTGGGATTT  500

seq1  ACTGTGGTGAAGAGACTTTGCTTGTCTGAAGCATATGAAGTGATACAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTGAAGAGACTTTGCTTGTCTGAAGCATATGAAGTGATACAGTT  550

seq1  TTGGTAGCGTGTGGTGTTCTGAGGTTGTTAGGTGACTCACAGCAAGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGCGTGTGGTGTTCTGAGGTTGTTAGGTGACTCACAGCAAGAGAG  600

seq1  AACTAACTTGAGACCCAAAGGATGGTGGCTAATCTTTGTTGTCAAGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACTTGAGACCCAAAGGATGGTGGCTAATCTTTGTTGTCAAGTTGT  650

seq1  GGAATCAACTGGGCTTAACTGTGAGGGATTTCCTTAATTGGATCATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAACTGGGCTTAACTGTGAGGGATTTCCTTAATTGGATCATTTGA  700

seq1  GGTAAGAAAACTCACCCTAACGCTTGACCATGCCTTCTGGCTGCTGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAAAACTCACCCTAACGCTTGACCATGCCTTCTGGCTGCTGCCCA  750

seq1  ATGCCACAGAAAGAAGATGGGAGAAGGAAGCTTTGCTTTTCCTGTGCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACAGAAAGAAGATGGGAGAAGGAAGCTTTGCTTTTCCTGTGCTTG  800

seq1  CCTTCACTCTCAGTGGCACTGTCTGTCCTGTTACTGGTCTGTCCTGCCGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTCTCAGTGGCACTGTCTGTCCTGTTACTGGTCTGTCCTGCCGT  850

seq1  CCCTTCTCTGTCCCCTCCCCTGCTAGAACCTAC-TTTTAGGAATTCTAGC  899
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  CCCTTCTCTGTCCCCT-CCCTGCTAGAACCTACTTTTTAGGAATTCTAGC  899

seq1  ATGCAGTGAAGACCAGCAGTTCTTTAGGAAACCCTCTGTAACTCTAGCAT  949
      |||||||||||||||||||||| ||||| |||||||||||||||| ||||
seq2  ATGCAGTGAAGACCAGCAGTTC-TTAGG-AACCCTCTGTAACTCT-GCAT  946

seq1  CAGACACTGAGAATGTTGAGGCATCCAGTCCTAT-GGAGTGAACAGTTAC  998
      ||||||||||||||| ||||||||||||||  || |||||||||||||||
seq2  CAGACACTGAGAATG-TGAGGCATCCAGTCTAATGGGAGTGAACAGTTAC  995

seq1  TGGATTCTTGTCCTTTGCTTCAGGAGATAGCATTGTTGTACCATCTAGAC  1048
      ||||||| || ||||||| ||| || | ||||||||||||||||| ||||
seq2  TGGATTC-TGGCCTTTGC-TCA-GAAAAAGCATTGTTGTACCATC-AGAC  1041