BAC Information

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BAC

Clone NameB6Ng01-152G24
Chromosome4 (Build37)
Map Location 45,925,867 - 46,055,946
singlet/doubletdoublet
Overlap geneTdrd7, Tmod1
Upstream geneD4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik, Frmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567, LOC100040580, Aldh1b1, Igfbpl1, 1300002K09Rik
Downstream geneBC057893, AU014645, Xpa, LOC624430, LOC666379, LOC666389, Foxe1, 5830415F09Rik, Hemgn, LOC100040643, Anp32b, Nans, Trim14, Coro2a, Tbc1d2, Gabbr2, Anks6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G24.bB6Ng01-152G24.g
ACCDH948011DH948012
length1,1011,012
definitionDH948011|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G24, 5' end.DH948012|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,925,867 - 45,926,967)(46,054,935 - 46,055,946)
sequence
gaattccatgtcaggatgtcaaggatgaagagactgagctaaggccttct
cttcaaagtttaaaaagaagattagggattaggtagatggctccgcagat
aatgtgcttgctttgcaagtgtgaagacctaagttcaaatcccaagaacc
cacataatgtcaggcatagtaactgtcttcattagggctttattgctgtg
aacagacaccatgtccaaggtaagtcttataaaggacaacatttaactgg
ggctggcttacagattcagaggttcagtccattatcatcaaggtgggaac
atggcagcatccaggcaggcatggtgcaggaggagctgagagttctacag
cttcatctgaaggctgctagcagaagactgacttccaggcagctaggatg
agagtattaaagcccaaggccacagtgacacacctactccaacaaggtcg
cacatactccatcagggccacaccctctctagtgccactccctgggctga
gcatatacaaaccgtcatagtaatagacacctgacatccctgtgtttctg
tggggagatgggagtgagagacaggagggtccccagaagctcagaacgca
gccaggctgatagataccgcagtgaacagtaacaacaacatgcctcaagg
tggacagtaaggtttgacactcacagccgttctctgaaatacacatatgt
gcacccgcacacatagagatccccaaacatacatacgatcagtaggttcc
aaccttaagatgaaaggtgtaaagtctataatgcttggagtttcactcat
aatgtctattaccaccatgtgattctgctaaaactaagcccaaccccatt
ggccctttcctcagatgctccttgcctgctctaatcactaaggatcatgt
caatcagctcactgtcccccatccccagacatggtgcagcagttcttagc
acttctgctcaccctcctctcgagttcacttctgaagacgtgtcagaagg
agacctgattcatcattccatgattaccacagtggagaaataagtgtgaa
aaaaaaatgtttacatggactccagacaacacctgattgccccactgaat
g
gaattccccccaaaagaacattgaaaggaccatggctctgctttgggaag
ctctctgaacggcagcataatccccctttttaagaaactctgacaatagc
ctggggtagagacgcctaagtccttgactgcaatgatgaatgtggacctt
tgaatggataggagctgtaaaggaaggcagcgtctactgaatggccgtgt
ggaagggaggctctgccttggtgcctgggtggaccgtggctttgttgact
aagatgagaacacaagaagatggacaggagagaccaaggctaggtctgct
gaggttgaaacatctttggggagctattactggcgttgtgcagtatgcag
gggcccagggctaacagaaatgggagagggggtggggcaagaggccagga
gaactaaaagcagctgcacagaaaggctgagcagtagataagcccatgaa
gaagtcagagtgaggccaagaggcgtctgctttccttggcttgtttgggc
actggaggaaatgtccaatggttactgccatggtccactacagacgtctt
tagcaacagccctgtggcgctactctaatatcctagagtaaaaggcagcc
tggtaaagggaacacggagtataaaaaggacaggggcagaggggtgggac
ctgtcttcttctccacttcccaccctctcaggcactgtgatatggagcct
gtcctctccaggagggcacaagggacgtgcgtgcttgagtgtttagcatt
tctatcagacaaggacccagtgcctcggcccagaggctccagaccacatc
ctagttgattccagtgagctcattctttcagaggctgttgccatcattaa
taaactagaagactgtataaaacaaaagggagccagccctccccccctcc
cagcgctgtggggagtgactcctgctatatccatgaagcagcccctggct
ttaaattgattatgacttcctagcagcaattaattgatctagctgtgttt
tggcctttaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_45925867_45926967
seq2: B6Ng01-152G24.b_45_1145

seq1  GAATTCCATGTCAGGATGTCAAGGATGAAGAGACTGAGCTAAGGCCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTCAGGATGTCAAGGATGAAGAGACTGAGCTAAGGCCTTCT  50

seq1  CTTCAAAGTTTAAAAAGAAGATTAGGGATTAGGTAGATGGCTCCGCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGTTTAAAAAGAAGATTAGGGATTAGGTAGATGGCTCCGCAGAT  100

seq1  AATGTGCTTGCTTTGCAAGTGTGAAGACCTAAGTTCAAATCCCAAGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTTGCTTTGCAAGTGTGAAGACCTAAGTTCAAATCCCAAGAACC  150

seq1  CACATAATGTCAGGCATAGTAACTGTCTTCATTAGGGCTTTATTGCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATGTCAGGCATAGTAACTGTCTTCATTAGGGCTTTATTGCTGTG  200

seq1  AACAGACACCATGTCCAAGGTAAGTCTTATAAAGGACAACATTTAACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACACCATGTCCAAGGTAAGTCTTATAAAGGACAACATTTAACTGG  250

seq1  GGCTGGCTTACAGATTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTTACAGATTCAGAGGTTCAGTCCATTATCATCAAGGTGGGAAC  300

seq1  ATGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACAG  350

seq1  CTTCATCTGAAGGCTGCTAGCAGAAGACTGACTTCCAGGCAGCTAGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTGAAGGCTGCTAGCAGAAGACTGACTTCCAGGCAGCTAGGATG  400

seq1  AGAGTATTAAAGCCCAAGGCCACAGTGACACACCTACTCCAACAAGGTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTAAAGCCCAAGGCCACAGTGACACACCTACTCCAACAAGGTCG  450

seq1  CACATACTCCATCAGGGCCACACCCTCTCTAGTGCCACTCCCTGGGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTCCATCAGGGCCACACCCTCTCTAGTGCCACTCCCTGGGCTGA  500

seq1  GCATATACAAACCGTCATAGTAATAGACACCTGACATCCCTGTGTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACAAACCGTCATAGTAATAGACACCTGACATCCCTGTGTTTCTG  550

seq1  TGGGGAGATGGGAGTGAGAGACAGGAGGGTCCCCAGAAGCTCAGAACGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGATGGGAGTGAGAGACAGGAGGGTCCCCAGAAGCTCAGAACGCA  600

seq1  GCCAGGCTGATAGATACCGCAGTGAACAGTAACAACAACATGCCTCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCTGATAGATACCGCAGTGAACAGTAACAACAACATGCCTCAAGG  650

seq1  TGGACAGTAAGGTTTGACACTCACAGCCGTTCTCTGAAATACACATATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTAAGGTTTGACACTCACAGCCGTTCTCTGAAATACACATATGT  700

seq1  GCACCCGCACACATAGAGATCCCCAAACATACATACGATCAGTAGGTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCGCACACATAGAGATCCCCAAACATACATACGATCAGTAGGTTCC  750

seq1  AACCTTAAGATGAAAGGTGTAAAGTCTATAATGCTTGGAGTTTCACTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAAGATGAAAGGTGTAAAGTCTATAATGCTTGGAGTTTCACTCAT  800

seq1  AATGTCTATTACCACCATGTGATTCTGCTAAAACTAAGCCCAACCCCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTATTACCACCATGTGATTCTGCTAAAACTAAGCCCAACCCCATT  850

seq1  GGCCCTTTCCTCAGATGCTCCTTGCCTGCTCTAATCACTAAGGATCATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTTTCCTCAGATGCTCCTTGCCTGCTCTAATCACTAAGGATCATGT  900

seq1  CAATCAGGCTCACTGTCCCCCATCCCCAGACATGGGTGCAGCAGGTTCTT  950
      |||||| |||||||||||||||||||||||||| ||||||||| ||||||
seq2  CAATCA-GCTCACTGTCCCCCATCCCCAGACAT-GGTGCAGCA-GTTCTT  947

seq1  AGCAC-TCTGCTCACCCTCCTCTCGAGTTCACTTCTG-AGACGGTGTCAG  998
      ||||| ||||||||||||||||||||||||||||||| |||| |||||||
seq2  AGCACTTCTGCTCACCCTCCTCTCGAGTTCACTTCTGAAGAC-GTGTCAG  996

seq1  AAGGAGCCCTGATTCCATCATCCAGTGATTACCA-AGTGGAGAAATAAGT  1047
      |||||| ||||||| |||||| |  ||||||||| |||||||||||||||
seq2  AAGGAGACCTGATT-CATCATTCCATGATTACCACAGTGGAGAAATAAGT  1045

seq1  GGGAAAAAAAAATGTTTACATGGACTCAGGAC-ACA-CTGATTGCCCCAG  1095
      | |||||||||||||||||||||||||  ||| ||| |||||||||||| 
seq2  GTGAAAAAAAAATGTTTACATGGACTCCAGACAACACCTGATTGCCCCAC  1095

seq1  TGAATG  1101
      ||||||
seq2  TGAATG  1101

seq1: chr4_46054935_46055946
seq2: B6Ng01-152G24.g_66_1077 (reverse)

seq1  CCTTAAA-GCCAGAACACCAGCTAGATCAATTATTTGGCTGCTAGG-AGT  48
      ||||||| |||| |||| ||||||||||||||| || ||||||||| |||
seq2  CCTTAAAGGCCAAAACA-CAGCTAGATCAATTAATT-GCTGCTAGGAAGT  48

seq1  CATTATCAGTTTAAAGCCAGGGGCCTGCTTCCTGGGATTAGCAGGAGTCA  98
      ||| |||| |||||||||||||| ||||||| |||   ||||||||||||
seq2  CATAATCAATTTAAAGCCAGGGG-CTGCTTCATGGATATAGCAGGAGTCA  97

seq1  CT-CCCACAGCGCTGGG-GGGGGGGGGGGCTGGCTCCCTTTTGTTTTATA  146
      || |||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  CTCCCCACAGCGCTGGGAGGGGGGGAGGGCTGGCTCCCTTTTGTTTTATA  147

seq1  CAGTCTTCTGGTTTATT-ATGATGGCAACAGCCTCTGAAAGAATGAGCTC  195
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  CAGTCTTCTAGTTTATTAATGATGGCAACAGCCTCTGAAAGAATGAGCTC  197

seq1  ACTGGAATCAACCTAGGATGTGGTCTGGAGCCTCCTGGGCCGAGGCACTG  245
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  ACTGGAATCAA-CTAGGATGTGGTCTGGAGCCT-CTGGGCCGAGGCACTG  245

seq1  GGTCCTTGTCTGATAGAAATGCTAAACACTCAAGCACGCACGTCCCTTGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGTCTGATAGAAATGCTAAACACTCAAGCACGCACGTCCCTTGT  295

seq1  GCCCTCCTGGAGAGGACAGGCTCCATATCACAGTGCCTGAGAGGGTGGGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCTGGAGAGGACAGGCTCCATATCACAGTGCCTGAGAGGGTGGGA  345

seq1  AGTGGAGAAGAAGACAGGTCCCACCCCTCTGCCCCTGTCCTTTTTATACT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGAAGAAGACAGGTCCCACCCCTCTGCCCCTGTCCTTTTTATACT  395

seq1  CCGTGTTCCCTTTACCAGGCTGCCTTTTACTCTAGGATATTAGAGTAGCG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGTTCCCTTTACCAGGCTGCCTTTTACTCTAGGATATTAGAGTAGCG  445

seq1  CCACAGGGCTGTTGCTAAAGACGTCTGTAGTGGACCATGGCAGTAACCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGGCTGTTGCTAAAGACGTCTGTAGTGGACCATGGCAGTAACCAT  495

seq1  TGGACATTTCCTCCAGTGCCCAAACAAGCCAAGGAAAGCAGACGCCTCTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATTTCCTCCAGTGCCCAAACAAGCCAAGGAAAGCAGACGCCTCTT  545

seq1  GGCCTCACTCTGACTTCTTCATGGGCTTATCTACTGCTCAGCCTTTCTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCACTCTGACTTCTTCATGGGCTTATCTACTGCTCAGCCTTTCTGT  595

seq1  GCAGCTGCTTTTAGTTCTCCTGGCCTCTTGCCCCACCCCCTCTCCCATTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGCTTTTAGTTCTCCTGGCCTCTTGCCCCACCCCCTCTCCCATTT  645

seq1  CTGTTAGCCCTGGGCCCCTGCATACTGCACAACGCCAGTAATAGCTCCCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGCCCTGGGCCCCTGCATACTGCACAACGCCAGTAATAGCTCCCC  695

seq1  AAAGATGTTTCAACCTCAGCAGACCTAGCCTTGGTCTCTCCTGTCCATCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTTTCAACCTCAGCAGACCTAGCCTTGGTCTCTCCTGTCCATCT  745

seq1  TCTTGTGTTCTCATCTTAGTCAACAAAGCCACGGTCCACCCAGGCACCAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTTCTCATCTTAGTCAACAAAGCCACGGTCCACCCAGGCACCAA  795

seq1  GGCAGAGCCTCCCTTCCACACGGCCATTCAGTAGACGCTGCCTTCCTTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCCTCCCTTCCACACGGCCATTCAGTAGACGCTGCCTTCCTTTA  845

seq1  CAGCTCCTATCCATTCAAAGGTCCACATTCATCATTGCAGTCAAGGACTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTATCCATTCAAAGGTCCACATTCATCATTGCAGTCAAGGACTT  895

seq1  AGGCGTCTCTACCCCAGGCTATTGTCAGAGTTTCTTAAAAAGGGGGATTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTCTCTACCCCAGGCTATTGTCAGAGTTTCTTAAAAAGGGGGATTA  945

seq1  TGCTGCCGTTCAGAGAGCTTCCCAAAGCAGAGCCATGGTCCTTTCAATGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCGTTCAGAGAGCTTCCCAAAGCAGAGCCATGGTCCTTTCAATGT  995

seq1  TCTTTTGGGGGGAATTC  1012
      |||||||||||||||||
seq2  TCTTTTGGGGGGAATTC  1012