BAC Information

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BAC

Clone NameB6Ng01-152L21
Chromosome4 (Build37)
Map Location 150,680,233 - 150,779,249
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneLOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152L21.bB6Ng01-152L21.g
ACCDH948241DH948242
length1,158811
definitionDH948241|Mus musculus domesticus DNA, BAC clone: B6Ng01-152L21, 5' end.DH948242|Mus musculus domesticus DNA, BAC clone: B6Ng01-152L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,680,233 - 150,681,404)(150,778,439 - 150,779,249)
sequence
gaattctttgggaaagtccctaagctgagaatcaaatctggggagaatga
ggggggctcttgagaacagggagagcagagctaatggtctctctggcctc
agggcagagccaagaccttcctcaggggtggtgaagtctcccacccgccc
gggtaggaaggaggtccatttgctggcacagttcagcgggtatctaggct
gccacagccccacagctccactctgtgatcggagccctccaagtctgctc
gccaagtccctcctgcagctctgagcagggcctcggtgagaggtgtaatc
tgcagatggcaacaggaagcaaatggctctccactggagcctggggcagg
gagagccgagggctggctgggtactttaatgatacaaggcagggggcttg
gtctcctgggacctgggacctgtaaaaagtgggagtgaagctcagtatct
cagctggtgtgcgctaccgtctacctgcagatcccacatccattaaagca
gcagcctgctccggtctgtgcaattacacctgcatctctgtcacgagcat
catccttgctggcctcccttggcgaaataacagattgtcctgcagcctcc
aggaagatgagcctcccggggcgggagcagtgggcttgcttcctaatgat
gggatgcaggtatctcacatctacttgccttctctggactcccacccttg
gccctgctttttatctgccttgtaatgggtttgcaggctctggcaagaga
gaatgcaatatttttaaaatgtataatgtcacgcgggctgcatgcggtcc
caattttctggttgcataagacgggagagaaacgggcttcttgttgcctg
taaccattgggtggtgctaaattctgactcactggaatcctgatatgttg
ctaacctggtggggtagcatcaatctcatagcagatggtgaagtgtgggg
ctccggcccgggtctcacttgtttcagactgcttctggtctgtttatgag
tcacgggctgcacgagcatagcctgccctttcccccacaccagcggtgag
tcagctacaggaacttgctcttctcttcttgaggctagacgtgctctggc
ataaggtagtgacatttacactggtgacacatgatcaagtccttgaaaaa
taagaaca
gaattctttatccactagctctactggagtcagctgcagaggacagctgt
gtgagaagacacgccctatgtctgcccaaagccaatagcagacaagaaag
gtccctggaggcccttgggagggggcggggggagtgggcgggtcagagac
tcagtacattctaaggatactcctgagtattctactgtgctctatgacta
cagagggccgcagtgaggcacactgccttctgccaccgctgccattggca
caactgcttctttacatcttagaacccaggagtcctaggttatgactacc
aacaatcctaaactcgagtccaagcaggctgcaacaggggcggaggaaac
tggcgtgctgtaagaggccgagcaccgctcggcaccacggctcgactgtg
ggattccacacacagtggacacatcgttcacattccggacacagttttct
ccctctgagttataaatcaatccacccccattcttcatttatggggcaca
gcttcaagtgcactccagggcctccaaattgctttcctgctcatcgaagg
cccggcagtaactgccccccaacccccaccagacccaaccttccctccaa
gtagcaggcagctttcccgagttctaatcacccctgagactccagctgaa
gggcagacatgaccttgagaagtggacatgagaaatgattagcctcagag
agagatagagagagagagagattggaggcgtgaggtcgctgggaggagtt
ttgtaccttcatgttagggatgggtgtcagagactagaggatgtatgcgg
acatgtttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150680233_150681404
seq2: B6Ng01-152L21.b_40_1197

seq1  GAATTCTTTGGGAAAGTCCCTAAGCTGAGAATCAAATCTGGGGAGAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGGAAAGTCCCTAAGCTGAGAATCAAATCTGGGGAGAATGA  50

seq1  GGGGGGCTCTTGAGAACAGGGAGAGCAGAGCTAATGGTCTCTCTGGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGCTCTTGAGAACAGGGAGAGCAGAGCTAATGGTCTCTCTGGCCTC  100

seq1  AGGGCAGAGCCAAGACCTTCCTCAGGGGTGGTGAAGTCTCCCACCCGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGAGCCAAGACCTTCCTCAGGGGTGGTGAAGTCTCCCACCCGCCC  150

seq1  GGGTAGGAAGGAGGTCCATTTGCTGGCACAGTTCAGCGGGTATCTAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAAGGAGGTCCATTTGCTGGCACAGTTCAGCGGGTATCTAGGCT  200

seq1  GCCACAGCCCCACAGCTCCACTCTGTGATCGGAGCCCTCCAAGTCTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGCCCCACAGCTCCACTCTGTGATCGGAGCCCTCCAAGTCTGCTC  250

seq1  GCCAAGTCCCTCCTGCAGCTCTGAGCAGGGCCTCGGTGAGAGGTGTAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTCCCTCCTGCAGCTCTGAGCAGGGCCTCGGTGAGAGGTGTAATC  300

seq1  TGCAGATGGCAACAGGAAGCAAATGGCTCTCCACTGGAGCCTGGGGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATGGCAACAGGAAGCAAATGGCTCTCCACTGGAGCCTGGGGCAGG  350

seq1  GAGAGCCGAGGGCTGGCTGGGTACTTTAATGATACAAGGCAGGGGGCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCGAGGGCTGGCTGGGTACTTTAATGATACAAGGCAGGGGGCTTG  400

seq1  GTCTCCTGGGACCTGGGACCTGTAAAAAGTGGGAGTGAAGCTCAGTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGGGACCTGGGACCTGTAAAAAGTGGGAGTGAAGCTCAGTATCT  450

seq1  CAGCTGGTGTGCGCTACCGTCTACCTGCAGATCCCACATCCATTAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGTGTGCGCTACCGTCTACCTGCAGATCCCACATCCATTAAAGCA  500

seq1  GCAGCCTGCTCCGGTCTGTGCAATTACACCTGCATCTCTGTCACGAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGCTCCGGTCTGTGCAATTACACCTGCATCTCTGTCACGAGCAT  550

seq1  CATCCTTGCTGGCCTCCCTTGGCGAAATAACAGATTGTCCTGCAGCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGCTGGCCTCCCTTGGCGAAATAACAGATTGTCCTGCAGCCTCC  600

seq1  AGGAAGATGAGCCTCCCGGGGCGGGAGCAGTGGGCTTGCTTCCTAATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATGAGCCTCCCGGGGCGGGAGCAGTGGGCTTGCTTCCTAATGAT  650

seq1  GGGATGCAGGTATCTCACATCTACTTGCCTTCTCTGGACTCCCACCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCAGGTATCTCACATCTACTTGCCTTCTCTGGACTCCCACCCTTG  700

seq1  GCCCTGCTTTTTATCTGCCTTGTAATGGGTTTGCAGGCTCTGGCAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCTTTTTATCTGCCTTGTAATGGGTTTGCAGGCTCTGGCAAGAGA  750

seq1  GAATGCAATATTTTTAAAATGTATAATGTCACGCGGGCTGCATGCGGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAATATTTTTAAAATGTATAATGTCACGCGGGCTGCATGCGGTCC  800

seq1  CAATTTTCTGGTTGCATAAGACGGGAGAGAAACGGGCTTCTTGTTGCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTCTGGTTGCATAAGACGGGAGAGAAACGGGCTTCTTGTTGCCTG  850

seq1  TAACCATTGGGTGGTGCTAAATTCTGACTCACTGGAATCCTGATATGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATTGGGTGGTGCTAAATTCTGACTCACTGGAATCCTGATATGTTG  900

seq1  CTAACCTGGGTGGGGTAGCATCAAATCTCATAAGCAAGATGGTGAAGTGG  950
      ||||||| |||||||||||||| |||||||| ||| |||||||||||| |
seq2  CTAACCT-GGTGGGGTAGCATC-AATCTCAT-AGC-AGATGGTGAAGT-G  945

seq1  TGGGGCTCCCGGCCCGGGTCTCACTTGTTTCAGACCTGC-TCTGGTCTGT  999
      ||||||| |||||||||||||||||||||||||| |||| ||||||||||
seq2  TGGGGCT-CCGGCCCGGGTCTCACTTGTTTCAGA-CTGCTTCTGGTCTGT  993

seq1  TTATGAGTCACGGGCTGCACGAGCCATAGCCTGCCC-TTCCCCCACACCA  1048
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  TTATGAGTCACGGGCTGCACGAG-CATAGCCTGCCCTTTCCCCCACACCA  1042

seq1  GCGGTGAGTCAGGCTACAAGAAACCTGCCTCCTCTCTCTCTGAAGCTTAA  1098
      ||||||||||| |||||| |||  ||  ||| |||||   ||| |||  |
seq2  GCGGTGAGTCA-GCTACAGGAA--CTTGCTCTTCTCTTCTTGAGGCT--A  1087

seq1  GCGGTGCTCTGGGCATAAAGGA-TGACATTATACA-TGGTGACCACATGT  1146
      |  ||||||| ||||||| | | ||||||| |||| |||||| |||||| 
seq2  GACGTGCTCT-GGCATAAGGTAGTGACATT-TACACTGGTGA-CACATGA  1134

seq1  CCAGGTTCCTGAAAAATTAAAGAACA  1172
       || || | ||||||||  |||||||
seq2  TCAAGTCCTTGAAAAAT--AAGAACA  1158

seq1: chr4_150778439_150779249
seq2: B6Ng01-152L21.g_68_878 (reverse)

seq1  TTCAAACATGTCCGCATACATCCTTCTTGCTCTCTGACACCCATCCCTGA  50
      ||||||||||||||||||||||| ||| | |||||||||||||||||| |
seq2  TTCAAACATGTCCGCATACATCC-TCTAG-TCTCTGACACCCATCCCT-A  47

seq1  CCCTGAA-GTACAAAACTCCT-CCAGCGGCCTCACGCCTCCAATCTCTCT  98
       | |||| ||||||||||||| |||||| |||||||||||||||||||||
seq2  ACATGAAGGTACAAAACTCCTCCCAGCGACCTCACGCCTCCAATCTCTCT  97

seq1  CTCTCTCTCTCTCTCTCTGAGGCTAATCATTTCTCATGTCCACTTCTCAA  148
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTATCTCTCTCTGAGGCTAATCATTTCTCATGTCCACTTCTCAA  147

seq1  GGTCATGTCTGCCCTTCAGCTGGAGTCTCA-GGGTGATTAGAACTCGGGA  197
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGTCATGTCTGCCCTTCAGCTGGAGTCTCAGGGGTGATTAGAACTCGGGA  197

seq1  AAGCTGCCTGCTACTTGGAGGGAAGGTTGGGTCTGGTGGGGGTTGGGGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCTGCTACTTGGAGGGAAGGTTGGGTCTGGTGGGGGTTGGGGGG  247

seq1  CAGTTACTGCCGGGCCTTCGATGAGCAGGAAAGCAATTTGGAGGCCCTGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACTGCCGGGCCTTCGATGAGCAGGAAAGCAATTTGGAGGCCCTGG  297

seq1  AGTGCACTTGAAGCTGTGCCCCATAAATGAAGAATGGGGGTGGATTGATT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACTTGAAGCTGTGCCCCATAAATGAAGAATGGGGGTGGATTGATT  347

seq1  TATAACTCAGAGGGAGAAAACTGTGTCCGGAATGTGAACGATGTGTCCAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCAGAGGGAGAAAACTGTGTCCGGAATGTGAACGATGTGTCCAC  397

seq1  TGTGTGTGGAATCCCACAGTCGAGCCGTGGTGCCGAGCGGTGCTCGGCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGGAATCCCACAGTCGAGCCGTGGTGCCGAGCGGTGCTCGGCCT  447

seq1  CTTACAGCACGCCAGTTTCCTCCGCCCCTGTTGCAGCCTGCTTGGACTCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGCACGCCAGTTTCCTCCGCCCCTGTTGCAGCCTGCTTGGACTCG  497

seq1  AGTTTAGGATTGTTGGTAGTCATAACCTAGGACTCCTGGGTTCTAAGATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGATTGTTGGTAGTCATAACCTAGGACTCCTGGGTTCTAAGATG  547

seq1  TAAAGAAGCAGTTGTGCCAATGGCAGCGGTGGCAGAAGGCAGTGTGCCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCAGTTGTGCCAATGGCAGCGGTGGCAGAAGGCAGTGTGCCTC  597

seq1  ACTGCGGCCCTCTGTAGTCATAGAGCACAGTAGAATACTCAGGAGTATCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGGCCCTCTGTAGTCATAGAGCACAGTAGAATACTCAGGAGTATCC  647

seq1  TTAGAATGTACTGAGTCTCTGACCCGCCCACTCCCCCCGCCCCCTCCCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGTACTGAGTCTCTGACCCGCCCACTCCCCCCGCCCCCTCCCAA  697

seq1  GGGCCTCCAGGGACCTTTCTTGTCTGCTATTGGCTTTGGGCAGACATAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCAGGGACCTTTCTTGTCTGCTATTGGCTTTGGGCAGACATAGG  747

seq1  GCGTGTCTTCTCACACAGCTGTCCTCTGCAGCTGACTCCAGTAGAGCTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTCTTCTCACACAGCTGTCCTCTGCAGCTGACTCCAGTAGAGCTAG  797

seq1  TGGATAAAGAATTC  811
      ||||||||||||||
seq2  TGGATAAAGAATTC  811