BAC Information

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BAC

Clone NameB6Ng01-152N12
Chromosome4 (Build37)
Map Location 123,198,301 - 123,356,761
singlet/doubletdoublet
Overlap geneMacf1
Upstream geneLOC633269, LOC633279, 9530002B09Rik, Ppt1, Cap1, Mfsd2, Mycl1, Trit1, Bmp8b, Oxct2b, Ppie, Hpcal4, Nt5c1a, Heyl, LOC194197, LOC622334, Pabpc4, Bmp8a, Oxct2a, D830031N03Rik
Downstream geneLOC100039110, Ndufs5, 6330407G11Rik, Rhbdl2, LOC667064, Mycbp, Rragc, 1700057H15Rik, LOC100039332, Pou3f1, Utp11l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152N12.bB6Ng01-152N12.g
ACCDH948317DH948318
length794617
definitionDH948317|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N12, 5' end.DH948318|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,355,968 - 123,356,761)(123,198,301 - 123,198,913)
sequence
gaattcatccgtccatctaacatcaggtatgtaggcccttctcgcttttg
ttttgttttcttcaaggtctcatatggcccaggctggccttgaacaatct
gtgtagcagaggctgatctttctgcctctacctaccaagagatggatttc
aggtgtgtcaccaagcccaccttttttctgtttgttttgttttgtttttt
tgaaggttgatgacatttttattagaatctacaagaaaattcccagggca
aacaaactgtaaatctcagcagcttcctggaggaggaggatggagaagag
agggaaagcaccattctgtttgaattaaccgggtctaggggtcagccctg
ggaggcagggagccacatgtggaggtttagaggaagagtgaggaagccaa
aggtgacaggaaaagcatctttcaatagcagggagaaaggaggaaagcaa
gctaccttttctgattaattagcaaagtgagctgacttaggaagctgaag
ccgattgtcattcgtctccccccccccccccatggcatccaactctcaat
ctttgtgcagccacttcccatagctgaagccgggtgtggtggcacatgcc
tttaatcccagcactctggcaggtggctttctgagcccgaggccagcctg
gtctataaagtgagttccaggacagccagggctatacagagaaaccctgt
cttggaaaaccaaaaagaaaaaagaaaaaaagagggctggtgagatggct
cagtgggtaagagcacccaactgctcttccgaaggtctgaagtt
gaattccaaactgaagctgggcgtggtggtgcacacctttaatcccagca
cttgggaagcagaggcaggtggatttctgagtttgaggccagcctggtct
acaaagtgagttccaggatagtcagagaaaccctgtctcaaaaaacaatg
agagagagagagagagagagagagagagagagagagagagagagagagag
agagagagagagagaagaaactggacactgagatagaattacctgaggcc
aacctaggctatgtagtgagactctgatacacaccctggggctgggggta
aaggaagggttggtgggaaagttgaaatgagaaaagaaagaagaaaagat
tggacagaaattcgattatggaggcactggaatactcggctgcatagcta
gacctgtaactctatataagcctcaagagatgaaatgactagatgctctg
agcaaatacatagttgattatggttcccttacatttctagctgacctcaa
acctctagacagcaggcatcccaaaatgaaaactttcatttaagagataa
atgaggggtcagtgcatagcttcattagagatattccagccagggtaatc
tactagtccatgtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_123355968_123356761
seq2: B6Ng01-152N12.b_46_839 (reverse)

seq1  AACTTCAGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCCACTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCCACTGAGCCAT  50

seq1  CTCACCAGCCCTCTTTTTTTCTTTTTTCTTTTTGGTTTTCCAAGACAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGCCCTCTTTTTTTCTTTTTTCTTTTTGGTTTTCCAAGACAGGG  100

seq1  TTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTATAGACCAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTATAGACCAGGCT  150

seq1  GGCCTCGGGCTCAGAAAGCCACCTGCCAGAGTGCTGGGATTAAAGGCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCGGGCTCAGAAAGCCACCTGCCAGAGTGCTGGGATTAAAGGCATG  200

seq1  TGCCACCACACCCGGCTTCAGCTATGGGAAGTGGCTGCACAAAGATTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCACACCCGGCTTCAGCTATGGGAAGTGGCTGCACAAAGATTGAG  250

seq1  AGTTGGATGCCATGGGGGGGGGGGGGGAGACGAATGACAATCGGCTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGATGCCATGGGGGGGGGGGGGGAGACGAATGACAATCGGCTTCAG  300

seq1  CTTCCTAAGTCAGCTCACTTTGCTAATTAATCAGAAAAGGTAGCTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAGTCAGCTCACTTTGCTAATTAATCAGAAAAGGTAGCTTGCTT  350

seq1  TCCTCCTTTCTCCCTGCTATTGAAAGATGCTTTTCCTGTCACCTTTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTTCTCCCTGCTATTGAAAGATGCTTTTCCTGTCACCTTTGGCT  400

seq1  TCCTCACTCTTCCTCTAAACCTCCACATGTGGCTCCCTGCCTCCCAGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTCTTCCTCTAAACCTCCACATGTGGCTCCCTGCCTCCCAGGGC  450

seq1  TGACCCCTAGACCCGGTTAATTCAAACAGAATGGTGCTTTCCCTCTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCTAGACCCGGTTAATTCAAACAGAATGGTGCTTTCCCTCTCTTC  500

seq1  TCCATCCTCCTCCTCCAGGAAGCTGCTGAGATTTACAGTTTGTTTGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTCCTCCTCCAGGAAGCTGCTGAGATTTACAGTTTGTTTGCCCT  550

seq1  GGGAATTTTCTTGTAGATTCTAATAAAAATGTCATCAACCTTCAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTTTCTTGTAGATTCTAATAAAAATGTCATCAACCTTCAAAAAAA  600

seq1  CAAAACAAAACAAACAGAAAAAAGGTGGGCTTGGTGACACACCTGAAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAACAGAAAAAAGGTGGGCTTGGTGACACACCTGAAATC  650

seq1  CATCTCTTGGTAGGTAGAGGCAGAAAGATCAGCCTCTGCTACACAGATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTGGTAGGTAGAGGCAGAAAGATCAGCCTCTGCTACACAGATTG  700

seq1  TTCAAGGCCAGCCTGGGCCATATGAGACCTTGAAGAAAACAAAACAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGCCAGCCTGGGCCATATGAGACCTTGAAGAAAACAAAACAAAAG  750

seq1  CGAGAAGGGCCTACATACCTGATGTTAGATGGACGGATGAATTC  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAGGGCCTACATACCTGATGTTAGATGGACGGATGAATTC  794

seq1: chr4_123198301_123198913
seq2: B6Ng01-152N12.g_68_684

seq1  GAATTCCAAACTGAAGCTGGGCGTGGTGGTGCACACCTTTAATCCCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAACTGAAGCTGGGCGTGGTGGTGCACACCTTTAATCCCAGCA  50

seq1  CTTGGGAAGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAAGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCT  100

seq1  ACAAAGTGAGTTCCAGGATAGTCAGAGAAACCCTGTCTCAAAAAACAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTCCAGGATAGTCAGAGAAACCCTGTCTCAAAAAACAATG  150

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  200

seq1  AGAGAGAGAGAGAGAAGAAACTGGACACTGAGATAGAATTACCTGAGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAAGAAACTGGACACTGAGATAGAATTACCTGAGGCC  250

seq1  AACCTAGGCTATGTAGTGAGACTCTGATACACACCCTGGGGCTGGGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGGCTATGTAGTGAGACTCTGATACACACCCTGGGGCTGGGGGTA  300

seq1  AAGGAAGGGTTGGTGGGAAAGTTGAAATGAGAAAAGAAAGAAGAAAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGGTTGGTGGGAAAGTTGAAATGAGAAAAGAAAGAAGAAAAGAT  350

seq1  TGGACAGAAATTCGATTATGGAGGCACTGGAATACTCGGCTGCAGAGCTA  400
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGACAGAAATTCGATTATGGAGGCACTGGAATACTCGGCTGCATAGCTA  400

seq1  GACCTGTAACTCTATATAAGCCTCAAGAGATGAAATGACTAGATGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTAACTCTATATAAGCCTCAAGAGATGAAATGACTAGATGCTCTG  450

seq1  AGCAAATACATAGTTGATTATGGTTCCCTTACATTTCTAGCTGACCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATACATAGTTGATTATGGTTCCCTTACATTTCTAGCTGACCTCAA  500

seq1  ACCTCTAGACAGCAGGCATCCCAAAATGAAAACTTTCATTCAAGAGATAA  550
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCTCTAGACAGCAGGCATCCCAAAATGAAAACTTTCATTTAAGAGATAA  550

seq1  ATGA-GGGTCAGTGCATAGC-TCATTAGAGATA-TCCAGCCAGGGTAATC  597
      |||| ||||||||||||||| |||||||||||| ||||||||||||||||
seq2  ATGAGGGGTCAGTGCATAGCTTCATTAGAGATATTCCAGCCAGGGTAATC  600

seq1  TACTAG-CCATGTGTAT  613
      |||||| ||||||||||
seq2  TACTAGTCCATGTGTAT  617