BAC Information

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BAC

Clone NameB6Ng01-152N24
Chromosome4 (Build37)
Map Location 91,666,448 - 91,667,599
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664840, LOC664848, LOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik
Downstream geneLOC664886, 1700011H22Rik, LOC68280
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152N24.bB6Ng01-152N24.g
ACCDH948341DH948342
length1,1451,144
definitionDH948341|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N24, 5' end.DH948342|Mus musculus domesticus DNA, BAC clone: B6Ng01-152N24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaggaaacacatggtggctcacaactatctgtaatagaatctg
actccctcttctgatgttcatgaaaggaggactcttatacctaaagtaag
taaatgaattgttgtttttaaaatagtatttgttactaataagcttggga
ccagcatagggggcagttagaagtggctccccctttcccttcacatgctc
tgagtgacatctcacaagcagtgcaactgcctttgctattctttgctatc
tcaggaaagagtcctagaaaaggaaagaaaaaaatatcaggagcatagca
gttttatttgcttctgtcaataatgcttcctggtgctgctcttccccctg
agaggggaaagttggctgtcttgttcatttaatctgatgcaaccactttc
actgtgttgcaagccatttcctcaaacatatgcccttccaggctgtgttg
ctctaacaagatagcagaaaaaatgctttaatcatttatatggactttgt
ggggtgtcacgtgtatgtaaatacgttgagcttgctcagaggctttcgta
ttttaatattctattttatcttagaaacattttttttcttgtggtcttac
agctagaatgaaattccaaaaccaggaaacgcagtggcttccactcctca
tcagaattcaggctcagcagctagtccatttgtaaggtttaattcaacag
aatcctgcaaccgcaagttttgtacaaagttccagtctgtctttaggtac
tattctcattaagagaataaacagtagaaaccaactttgactaaactaaa
acaacagcaacaaaacccatgttttaaagatactattagtaaaattatga
gctagctggtaaacagaaagaaagagcaaaagaagtcagcatcaggagag
aaaggatcgtcaatagttccagccagttcccccaaagaagatcattttga
atttgacatggcttctcttcagatacccatgctgaaagaattcccatcac
tttgtgggagcttctagtccaatgatggattaccaataatgacattaatg
ggtcaagttatttgatacttgaaattagaaaaaatgtgtttgtatttaga
aaaaaaatattgaggtttggaaacggacaaaccaagaaatgatgc
gaattctcacctgaggaatactgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgggtaagatcaaaaattcaggtgacagc
agaggctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagattccccaactggtaaaaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggagacagaaaatgcggtacatcgacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcaccgatcagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactgaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggctccatgg
agagctagagaagtactcaagagcttaaggatcttgcaccctataggtgg
aacaacattatgactacagtacccgagctcttgactctagctgcatgtat
caaagatgcctagtgcatcactgcaaagaagtcattgaaatcgcaacttt
atgtctcagtacagggaatgccagggccaaaggggattgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91666448_91667599
seq2: B6Ng01-152N24.b_46_1190 (reverse)

seq1  GCATCATTTCTTGGTTTTGTCCCTTTTTTCCCAACACCTTCATA-TTTTT  49
      |||||||||||||| ||||||| |||    |||| ||||  ||| |||||
seq2  GCATCATTTCTTGG-TTTGTCCGTTT----CCAA-ACCTCAATATTTTTT  44

seq1  TTCT-AATATCAACACATTTTTTTCTAATATCAAGTATC-AATAACTTGA  97
      |||| ||||  |||||| ||||||||||| ||||||||| ||||||||||
seq2  TTCTAAATACAAACACA-TTTTTTCTAATTTCAAGTATCAAATAACTTGA  93

seq1  CCCATTTAATAGTCAATTATTGGTAAATCCATCATTGGACTTAGAAGCT-  146
      |||| ||||| ||| ||||||||| ||||||||||||||| |||||||| 
seq2  CCCA-TTAAT-GTC-ATTATTGGT-AATCCATCATTGGAC-TAGAAGCTC  138

seq1  CCACAAAGTGATGGGAATTCTTTCAGCATGGGTATCTGAAGAGAAGCCAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAGTGATGGGAATTCTTTCAGCATGGGTATCTGAAGAGAAGCCAT  188

seq1  GTCAAATTCAAAATGATC-TCTTTGGGGGAACTGGCTGGAACTATTGACG  245
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTCAAATTCAAAATGATCTTCTTTGGGGGAACTGGCTGGAACTATTGACG  238

seq1  ATCCTTTCTCTCCTGATGCTGACTTCTTTTGCTCTTTCTTTCTGTTTACC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCTCTCCTGATGCTGACTTCTTTTGCTCTTTCTTTCTGTTTACC  288

seq1  AGCTAGCTCATAATTTTACTAATAGTATCTTTAAAACATGGGTTTTGTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCTCATAATTTTACTAATAGTATCTTTAAAACATGGGTTTTGTTG  338

seq1  CTGTTGTTTTAGTTTAGTCAAAGTTGGTTTCTACTGTTTATTCTCTTAAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTTTTAGTTTAGTCAAAGTTGGTTTCTACTGTTTATTCTCTTAAT  388

seq1  GAGAATAGTACCTAAAGACAGACTGGAACTTTGTACAAAACTTGCGGTTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAGTACCTAAAGACAGACTGGAACTTTGTACAAAACTTGCGGTTG  438

seq1  CAGGATTCTGTTGAATTAAACCTTACAAATGGACTAGCTGCTGAGCCTGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTCTGTTGAATTAAACCTTACAAATGGACTAGCTGCTGAGCCTGA  488

seq1  ATTCTGATGAGGAGTGGAAGCCACTGCGTTTCCTGGTTTTGGAATTTCAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATGAGGAGTGGAAGCCACTGCGTTTCCTGGTTTTGGAATTTCAT  538

seq1  TCTAGCTGTAAGACCACAAGAAAAAAAATGTTTCTAAGATAAAATAGAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGTAAGACCACAAGAAAAAAAATGTTTCTAAGATAAAATAGAAT  588

seq1  ATTAAAATACGAAAGCCTCTGAGCAAGCTCAACGTATTTACATACACGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATACGAAAGCCTCTGAGCAAGCTCAACGTATTTACATACACGTG  638

seq1  ACACCCCACAAAGTCCATATAAATGATTAAAGCATTTTTTCTGCTATCTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCACAAAGTCCATATAAATGATTAAAGCATTTTTTCTGCTATCTT  688

seq1  GTTAGAGCAACACAGCCTGGAAGGGCATATGTTTGAGGAAATGGCTTGCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGCAACACAGCCTGGAAGGGCATATGTTTGAGGAAATGGCTTGCA  738

seq1  ACACAGTGAAAGTGGTTGCATCAGATTAAATGAACAAGACAGCCAACTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGAAAGTGGTTGCATCAGATTAAATGAACAAGACAGCCAACTTT  788

seq1  CCCCTCTCAGGGGGAAGAGCAGCACCAGGAAGCATTATTGACAGAAGCAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCAGGGGGAAGAGCAGCACCAGGAAGCATTATTGACAGAAGCAA  838

seq1  ATAAAACTGCTATGCTCCTGATATTTTTTTCTTTCCTTTTCTAGGACTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTGCTATGCTCCTGATATTTTTTTCTTTCCTTTTCTAGGACTCT  888

seq1  TTCCTGAGATAGCAAAGAATAGCAAAGGCAGTTGCACTGCTTGTGAGATG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGATAGCAAAGAATAGCAAAGGCAGTTGCACTGCTTGTGAGATG  938

seq1  TCACTCAGAGCATGTGAAGGGAAAGGGGGAGCCACTTCTAACTGCCCCCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAGAGCATGTGAAGGGAAAGGGGGAGCCACTTCTAACTGCCCCCT  988

seq1  ATGCTGGTCCCAAGCTTATTAGTAACAAATACTATTTTAAAAACAACAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTCCCAAGCTTATTAGTAACAAATACTATTTTAAAAACAACAAT  1038

seq1  TCATTTACTTACTTTAGGTATAAGAGTCCTCCTTTCATGAACATCAGAAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACTTACTTTAGGTATAAGAGTCCTCCTTTCATGAACATCAGAAG  1088

seq1  AGGGAGTCAGATTCTATTACAGATAGTTGTGAGCCACCATGTGTTTCCTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTCAGATTCTATTACAGATAGTTGTGAGCCACCATGTGTTTCCTG  1138

seq1  GGAATTC  1152
      |||||||
seq2  GGAATTC  1145