BAC Information

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BAC

Clone NameB6Ng01-152O15
Chromosome4 (Build37)
Map Location 145,713,640 - 145,714,535
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433
Downstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152O15.bB6Ng01-152O15.g
ACCDH948369DH948370
length1,225898
definitionDH948369|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O15, 5' end.DH948370|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttggatcattattgtataggataaagaaaccatctacatatc
tttagtgtatcactacaagttagttcatcttgtagttctgcagagatctg
ctcaaccttgtgaactgattcctggtggtttttatatatgtttaatagtg
acaggaaaagcacattaagagcagcaatctttcctaaagtgattttctcc
agtaccttgcctactgaagctctttcataattttgctagcataaagtgaa
gtaatctcaggaagatcaccagtttgtcctctgatattaggacatattaa
tttgtcctttgatggctcctgacacctaagcttctcatggccgccatgcc
tcaagacctagatcaaaagcatgcgtcattccatgccaagttctaggtca
gatgcctgtgccatccagactcagatctggatcatgggtattccctctat
ttctggattgtaatcattttatatgtagtcaagttgacagccaggaatag
ccaaaacaataatacaccatttaaaacacagaaagtaaaacctcacatcg
gtatctcactttatgccaaaattatgtttgacaaaatgcaacaccccttt
ttcataagtcttggtgagagaagggatagagtgatcatatctaaacacaa
tataggttatatacagcaacccttaccaagtaccaaattaaacataaaga
aaattaaagcatttccactaaaattggggacaaggctgcccacttttccc
atatctcctcaatatgctatgtaaagttctagctagagcaatagtacagc
taaaggaaggcatcttggaactggaagagaagagggaatctggggggaga
gaaataatggagtcaagacagtattctgatcagattcactttatgtctgc
aacatgctttataaagagaggggaggctattcccgccaggcaagttcctt
ccagttgtagatcaacctttagtagaaccgggaaatcaagtttgtagctt
acttctggcgatccacaaaactggtccgcctcccgcaggtagcaggtatg
tgacactcaagagagtgatggaaacagccagcactgtcctgtctatgcga
atgtccaagtcagccttgctatgtatgactagactgaacagtcctttact
tgaataacagaacccttctatcagtctctaattagcataggacctagtcc
tgggcatctacttccagtctgagta
gaattccatcggctgaaagaaagaatttgacatatgcttcctataccaga
atacctatggtggccatactgtaagtttcaaccatctttaaggcatttca
aatataagtgaacctataaaatcccaagacaaactgaatcttggtccatc
aaaaggctctgcaatcctgagatacggccaccagggggcagcaggtgctt
gggttggcatgcgtgaaattatgttttgattaaaaattaacctctagccc
accctgtggctactaaaggtatatcagcagcccgcattgagatgctcggg
gtggaaaagtacctgcgactgtgttctatgtcacatgcccacaactcgca
acttccaccactctgcttggtaaaagttccccccaaaaatcatccaaatt
tgccatggatctgggttttaacacacagataagtctgtctaaacacactt
gaaggccgctcaagggaaatgaatggcttatttccctctccagtggcatg
agtgacaccgggggtgaggtgaacaacatctagacagcccagagcgagta
aagacaccctcccacccatgtatgactcagtggaccagggattctgtgga
gttactcatgggagcacggtgactcgaaagcagcttcagcatagaaaaac
cctacctcagggccagtgaggatccctaaaggctacgtgcctggagctct
cttctgggcttgcagggggctcagcacagcatgaaggctatttctgattg
tctagtttgatttggatctggaattaactatgagacaacctctgtttggg
tctatagaggtgtttctagggtggatgaagatccccagggcaaacataag
ttcaaggcaaatttacttgctgttttgttggctaccttcatccttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145713640_145714535
seq2: B6Ng01-152O15.g_73_970 (reverse)

seq1  AGGAAGGAATGAAGGTAGGCAAACAAACAGC-AGTATATTTGCCTTGAAC  49
      ||||||| |||||||||| |||  ||||||| |||| |||||||||||||
seq2  AGGAAGG-ATGAAGGTAGCCAACAAAACAGCAAGTAAATTTGCCTTGAAC  49

seq1  TTCTGTCTGCCCTGGGAATCTTCATCCACCCTAGAAACACCTCTATAGAC  99
      || ||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATGTTTGCCCTGGGGATCTTCATCCACCCTAGAAACACCTCTATAGAC  99

seq1  CCAAACAGAGGTTTGTCTCATAGTTAATTCCAGATCC-AATC-AACTAGA  147
      ||||||||||| ||||||||||||||||||||||||| |||| |||||||
seq2  CCAAACAGAGG-TTGTCTCATAGTTAATTCCAGATCCAAATCAAACTAGA  148

seq1  CAATCAGAATTAGCCTTCATGCTGTGCTGAGCCCCCTGCAAGCCCAGAAG  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGAAATAGCCTTCATGCTGTGCTGAGCCCCCTGCAAGCCCAGAAG  198

seq1  AGAGCTCCAGGCACGTAGCCTTTAGGGATCCTCACTGGCCCTGAGGTAGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCCAGGCACGTAGCCTTTAGGGATCCTCACTGGCCCTGAGGTAGG  248

seq1  G-TTTTCTATGCTGAAGCTGCTTTCGAGTCACCGTGCTCCCATGAGTAAC  296
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTATGCTGAAGCTGCTTTCGAGTCACCGTGCTCCCATGAGTAAC  298

seq1  TCCACAGAATCCCTGGTCCACTGAGTCATACATGGGTGGGAGGGTGTCTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGAATCCCTGGTCCACTGAGTCATACATGGGTGGGAGGGTGTCTT  348

seq1  TACTCGCTCTGGACTGTCTAGATGTTGTTCACCTCACCCCCGGTGTCACT  396
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TACTCGCTCTGGGCTGTCTAGATGTTGTTCACCTCACCCCCGGTGTCACT  398

seq1  CATGCCACTGGAGAGGGAAATAAGCCATTCATTTCCCTTGAGCGGCCTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCACTGGAGAGGGAAATAAGCCATTCATTTCCCTTGAGCGGCCTTC  448

seq1  AAGTGTGTTTAGACAGACTTATCTGTGTGTTAAAACCCAGATCCATGGCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGTTTAGACAGACTTATCTGTGTGTTAAAACCCAGATCCATGGCA  498

seq1  AATTTGGATGATTTTTGGGGGGAACTTTTACCAAGCAGAGTGGTGGAAGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGATGATTTTTGGGGGGAACTTTTACCAAGCAGAGTGGTGGAAGT  548

seq1  TGCGAGTTGTGGGCATGTGACATAGAACACAGTCGCAGGTACTTTTCCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGTTGTGGGCATGTGACATAGAACACAGTCGCAGGTACTTTTCCAC  598

seq1  CCCGAGCATCTCAATGCGGGCTGCTGATATACCTTTAGTAGCCACAGGGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGCATCTCAATGCGGGCTGCTGATATACCTTTAGTAGCCACAGGGT  648

seq1  GGGCTAGAGGTTAATTTTTAATCAAAACATAATTTCACGCATGCAAACCC  696
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGCTAGAGGTTAATTTTTAATCAAAACATAATTTCACGCATGCCAACCC  698

seq1  GAGCACCTGCTGCCCCCTGGTGGCCGTATCTCAGGATTGCAGAGCCTTTT  746
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTGCTGCCCCCTGGTGGCCGTATCTCAGGATTGCAGAGCCTTTT  748

seq1  GATGGACCAAGATTCAGTTTGTCTTGGGATTTTATAGGTTCACTTATATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACCAAGATTCAGTTTGTCTTGGGATTTTATAGGTTCACTTATATT  798

seq1  TGAAATGCCTTAAAGATGTTTGAAACTTACAGTATGGCCACCATAGGTAT  846
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGAAATGCCTTAAAGATGGTTGAAACTTACAGTATGGCCACCATAGGTAT  848

seq1  TCTGGTATAGGAAGCATATGTCAAATTCTTTCTTTCAGCCGATGGAATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTATAGGAAGCATATGTCAAATTCTTTCTTTCAGCCGATGGAATTC  898