BAC Information

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BAC

Clone NameB6Ng01-152P09
Chromosome4 (Build37)
Map Location 95,510,572 - 95,620,759
singlet/doubletdoublet
Overlap genenone
Upstream geneTek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
Downstream geneHook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152P09.bB6Ng01-152P09.g
ACCDH948405DH948406
length1,094981
definitionDH948405|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P09, 5' end.DH948406|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,510,572 - 95,511,688)(95,620,131 - 95,620,759)
sequence
gaattctatgtgtgagccagctgtgcgatcacagcttgagtgtgtgatca
caggcatgacccctgagcctcaaatctctaggagggtaaggcagagtgct
cggtgccgggccaagcacatgccaaatatgagagttgctgatggtgtgcc
ttcactgccaccctaatgttttcttctgctttctcctttaagtttgggac
tcgcttcatcattgaaacaatggaggcagcagggcactctctcagtaccc
tcttcttatgtggaggcctaagcaagaatccgctttttgtgcaaatgcat
gctgacattactggtaagcctcagggcagggatatagggctggtggaaaa
ccttgggttgtcagcagaggtgaaaggtaaaggcaggctgaggataggga
accattgtggtgactcaagttatcgaggtaatggtgcaatctgtgtcttc
atgatggaaaaaagcactctcagatatgtgcagttactaaacaagacacc
aaagttggcaaggacagatcttaattcaaggagcatttacccatcttttt
tgagtaccaagcattatgtggggaatattgaagacaaacaaatgaataaa
acatgacctgagctccatgaagctcatggactccccagaaaggcagaaag
gaaacagacataataaatacactgtgagaagagccctgagtgggaagagc
ataatgtgcactttgctcagttttggatcttgtagcacagggtaagtgat
caggctatctgaagaaggaacctatgtccaaaatgctgtggacaagatct
agcatgggcctgtaattccaagggcacccaaatgctgagattccatctca
gtgcccaaggggttctggtcgtaaagtcatgcgtttagcatctttgtgat
gggcatagggagtaggggacagtggcaaactggcatctgggagagtccag
agctcaggaaagctctctgggaggacaccttgcaggggtataaataacct
gactagctcagtctcctgtgctagtacttcacattctagtatcttcttcc
agtgtttctggagactgtgcgctctgtacaatgctcggtcagac
gaattccactgctatggatcaggctacctatatgttttactagaaatagc
accaatgctggatgtgtttctgtggaccctcagacttggacaaatatctc
taagactatagtgcaaagcattaagatgggagtgcctatatctcagactg
gacaagctgccttgtttgtagacagagaacacagagactgtggaacctgc
cttcaaaaaaatcaaatacagaagttgttataattaccctcccctttact
ttaatgtgactggttattcctactcaatcagagactggtctggaaattaa
tccaatattggacaaaaggaaatgaccgtgggcatttggaggactggttc
tggacattttcagagacatatttgaaaattggcagctgccttgtatgatg
ttgtgtttgctatggataaaaatggaacatgttctggggttatagtaaat
ataacatcctgcattaccccacctaatcttttactaattgggaatgttac
ctttgttatgataaggagttcaatgttcttgttttaattggcttttgtcc
aattgtgtttctgcactgtgtaatggtcaatctgtaatggaagtacaaca
accagcttttattatgattccagtaaatttgtctgaacccagatattctg
aaaaaggcttaaaaatattggaagcattgcatcacattctggcaaggagc
aaatgtatggctgggcagataattgctggtgttgttgctctcataacttt
tatagccagtgctaccacttctgcatgcagtaggccgggatgcagaaatc
tcagtagcccacagcagctctttgtaaaaaaaaaaaaaaaaaaaaaaaac
cagttgttccctatttctcctaaccttagccttggacaacagttatatag
atttcattttgtgggtgactgcttttcgagttggccttagtgtgcataat
tattctattatatctgactttctttctcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95510572_95511688
seq2: B6Ng01-152P09.b_48_1141

seq1  GAATTCTATGTGTGAGCCAGCTGTGCGATCACAGCTTGAGTGTGTGATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTGTGAGCCAGCTGTGCGATCACAGCTTGAGTGTGTGATCA  50

seq1  CAGGCATGACCCCTGAGCCTCAAATCTCTAGGAGGGTAAGGCAGAGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGACCCCTGAGCCTCAAATCTCTAGGAGGGTAAGGCAGAGTGCT  100

seq1  CGGTGCCGGGCCAAGCACATGCCAAATATGAGAGTTGCTGATGGTGTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCCGGGCCAAGCACATGCCAAATATGAGAGTTGCTGATGGTGTGCC  150

seq1  TTCACTGCCACCCTAATGTTTTCTTCTGCTTTCTCCTTTAAGTTTGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCCACCCTAATGTTTTCTTCTGCTTTCTCCTTTAAGTTTGGGAC  200

seq1  TCGCTTCATCATTGAAACAATGGAGGCAGCAGGGCACTCTCTCAGTACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTCATCATTGAAACAATGGAGGCAGCAGGGCACTCTCTCAGTACCC  250

seq1  TCTTCTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTGTGCAAATGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTATGTGGAGGCCTAAGCAAGAATCCGCTTTTTGTGCAAATGCAT  300

seq1  GCTGACATTACTGGTAAGCCTCAGGGCAGGGATATAGGGCTGGTGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACATTACTGGTAAGCCTCAGGGCAGGGATATAGGGCTGGTGGAAAA  350

seq1  CCTTGGGTTGTCAGCAGAGGTGAAAGGTAAAGGCAGGCTGAGGATAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTTGTCAGCAGAGGTGAAAGGTAAAGGCAGGCTGAGGATAGGGA  400

seq1  ACCATTGTGGTGACTCAAGTTATCGAGGTAATGGTGCAATCTGTGTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGTGGTGACTCAAGTTATCGAGGTAATGGTGCAATCTGTGTCTTC  450

seq1  ATGATGGAAAAAAGCACTCTCAGATATGTGCAGTTACTAAACAAGACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGAAAAAAGCACTCTCAGATATGTGCAGTTACTAAACAAGACACC  500

seq1  AAAGTTGGCAAGGACAGATCTTAATTCAAGGAGCATTTACCCATCTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGGCAAGGACAGATCTTAATTCAAGGAGCATTTACCCATCTTTTT  550

seq1  TGAGTACCAAGCATTATGTGGGGAATATTGAAGACAAACAAATGAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACCAAGCATTATGTGGGGAATATTGAAGACAAACAAATGAATAAA  600

seq1  ACATGACCTGAGCTCCATGAAGCTCATGGACTCCCCAGAAAGGCAGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACCTGAGCTCCATGAAGCTCATGGACTCCCCAGAAAGGCAGAAAG  650

seq1  GAAACAGACATAATAAATACACTGTGAGAAGAGCCCTGAGTGGGAAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGACATAATAAATACACTGTGAGAAGAGCCCTGAGTGGGAAGAGC  700

seq1  ATAATGTGCACTTTGCTCAGTTTTGGATCTTGTAGCACAGGGTAAGTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGCACTTTGCTCAGTTTTGGATCTTGTAGCACAGGGTAAGTGAT  750

seq1  CAGGCTATCTGAAGAAGGAACCTAGGTCCAAAATGCTGTGGACAAGATCT  800
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGGCTATCTGAAGAAGGAACCTATGTCCAAAATGCTGTGGACAAGATCT  800

seq1  AGCATGGGCCTGTAATTCCAAGGGCACCCAAATGCTGAGATTCCATCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGCCTGTAATTCCAAGGGCACCCAAATGCTGAGATTCCATCTCA  850

seq1  GTGCCCAAGGGGTTCTGGTCGTAAAGTCATGCGTTTAGCATCTTTGTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAAGGGGTTCTGGTCGTAAAGTCATGCGTTTAGCATCTTTGTGAT  900

seq1  GGGCATAGGGAGTAGGGGACAGTGGCAAACTGGCATCTGGGAAGAGTCCA  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGGCATAGGGAGTAGGGGACAGTGGCAAACTGGCATCTGGG-AGAGTCCA  949

seq1  GAGCTCCAGGAAAAGCTCTCTGGGAGGACACCTTGCAGGGGTATAAATAA  1000
      ||||| |||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGCT-CAGG-AAAGCTCTCTGGGAGGACACCTTGCAGGGGTATAAATAA  997

seq1  ACCCTGACCTAGCTTCAAGTCTCCCTGTGCTAGTACCTTCAACATTCTAG  1050
        ||||| ||||||   ||||| |||||||||||| |||| |||||||||
seq2  --CCTGA-CTAGCT--CAGTCT-CCTGTGCTAGTA-CTTC-ACATTCTAG  1039

seq1  TATCTTCTCCCCAAGTGTCTCCTGGAGACTGTTGCGCCCTCCTGTACCCA  1100
      |||||||| ||  ||||| | |||||||||| |||||    |||||  ||
seq2  TATCTTCTTCC--AGTGT-TTCTGGAGACTG-TGCGC---TCTGTA--CA  1080

seq1  TTGCTCGGTACCCAGAC  1117
       ||||||||   |||||
seq2  ATGCTCGGT---CAGAC  1094

seq1: chr4_95620131_95620759
seq2: B6Ng01-152P09.g_70_698 (reverse)

seq1  AATTTACTGGAATCATAATAAAAGCTGGTTGTTGTACTTCCATTACAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTGGAATCATAATAAAAGCTGGTTGTTGTACTTCCATTACAGAT  50

seq1  TGACCATTACACAGTGCAGAAACACAATTGGACAAAAGCCAATTAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTACACAGTGCAGAAACACAATTGGACAAAAGCCAATTAAAACA  100

seq1  AGAACATTGAACTCCTTATCATAACAAAGGTAACATTCCCAATTAGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTGAACTCCTTATCATAACAAAGGTAACATTCCCAATTAGTAAA  150

seq1  AGATTAGGTGGGGTAATGCAGGATGTTATATTTACTATAACCCCAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGGTGGGGTAATGCAGGATGTTATATTTACTATAACCCCAGAACA  200

seq1  TGTTCCATTTTTATCCATAGCAAACACAACATCATACAAGGCAGCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATTTTTATCCATAGCAAACACAACATCATACAAGGCAGCTGCCA  250

seq1  ATTTTCAAATATGTCTCTGAAAATGTCCAGAACCAGTCCTCCAAATGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAATATGTCTCTGAAAATGTCCAGAACCAGTCCTCCAAATGCCC  300

seq1  ACGGTCATTTCCTTTTGTCCAATATTGGATTAATTTCCAGACCAGTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCATTTCCTTTTGTCCAATATTGGATTAATTTCCAGACCAGTCTCT  350

seq1  GATTGAGTAGGAATAACCAGTCACATTAAAGTAAAGGGGAGGGTAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGTAGGAATAACCAGTCACATTAAAGTAAAGGGGAGGGTAATTAT  400

seq1  AACAACTTCTGTATTTGATTTTTTTGAAGGCAGGTTCCACAGTCTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTCTGTATTTGATTTTTTTGAAGGCAGGTTCCACAGTCTCTGTG  450

seq1  TTCTCTGTCTACAAACAAGGCAGCTTGTCCAGTCTGAGATATAGGCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTCTACAAACAAGGCAGCTTGTCCAGTCTGAGATATAGGCACTC  500

seq1  CCATCTTAATGCTTTGCACTATAGTCTTAGAGATATTTGTCCAAGTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTAATGCTTTGCACTATAGTCTTAGAGATATTTGTCCAAGTCTGA  550

seq1  GGGTCCACAGAAACACATCCAGCATTGGTGCTATTTCTAGTAAAACATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCACAGAAACACATCCAGCATTGGTGCTATTTCTAGTAAAACATAT  600

seq1  AGGTAGCCTGATCCATAGCAGTGGAATTC  629
      |||||||||||||||||||||||||||||
seq2  AGGTAGCCTGATCCATAGCAGTGGAATTC  629