BAC Information

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BAC

Clone NameB6Ng01-153A01
Chromosome4 (Build37)
Map Location 128,957,006 - 129,060,720
singlet/doubletdoublet
Overlap geneSync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588
Upstream geneZscan20, Tlr12, Phc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080
Downstream geneZbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b, Khdrbs1, LOC100040532, Ptp4a2, LOC622469, LOC622480, 1700003M07Rik, Bai2, Col16a1, Pef1, Hcrtr1, Tinagl, Gm853, Serinc2, Fabp3, Zcchc17, Wdr57
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153A01.bB6Ng01-153A01.g
ACCDH948437DH948438
length9621,111
definitionDH948437|Mus musculus domesticus DNA, BAC clone: B6Ng01-153A01, 5' end.DH948438|Mus musculus domesticus DNA, BAC clone: B6Ng01-153A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,060,096 - 129,060,720)(128,957,006 - 128,958,123)
sequence
gaattctcaaaattatgggttttggaggacatgcaaacagagaggatgaa
gatgtccttctgtatgacacacttaaggaaaggatgaagatgtctgcctc
tagcacagagatacctcattttcagcatctccaagctggtttttattgtc
tttatgactctcttgattccaccaaactaaaactaaacaaacagacaaca
taaactggtcttctaagctcctccttttctttctttcttttctttttctt
ttttttttttttgacagtcccgataggctggtactatctatgtagatcaa
gctgtcctgaacccacagtggttctggctacctctgcctcccaggtactg
ggattgaagatgtgtgtcactgttgtgtgacaaaaactcttcctggggaa
cacagcatactcctctctacccacccagataggaaacccatgacaggcta
aagtacagaaaccaccagagtccagcttggtgaaacaatgaacttcattg
gggttacttacaggaatgtgggtgatgggctacttacagcagcagaaatg
actgaaaggcaccatccaacaggagtgaaagctcacaggagctgggaaag
caggagcccactgcagccttcaggcaccatccaggcccagccagcaggag
tgacagcctgcaggctggagagagtcctttccctggtacctccactgaac
tacatctcttcagacagctcttctgctctgagtctgtaaagctcagctct
gcttcctgcagcagggagggacttggggaatctgtccagtttcagggagt
tcttgaagttatttttctgttgcttgactccctgagggatggaatgtttt
aatcccagagggacagttacacaaccaccatcatgcctgactcttgtttt
gtgttttttttcagagaagatttctctgtgtaacagccctggctgtgctg
gactcgctctgt
gaattcactctgtagaccaggctatcctcgaactcagaaatccacctgcc
tcctctgcctctctgcctctctgcctcaagtgctgagattaaaagcatgt
gccaccacttcctggctcaaagtttctaaatagacaatgatggctaaaat
tcttgggcccatgatgaaactctttttgagttcattctcacaataaacct
ttgctatgagttgggttgcccagttctgtggagaccagagccagtgagtg
aggtagcttcccacgagcacccagtgaatgcagcacagagtcaggctcca
cctagcctctcgctttccaagcctggattcatatcctgcttcaagacaca
gtgaccctgagagtcctggagggcacctcagacccatttattttcttcct
ccttgggacagtttcaggacagtgtcactacaggaaagctgagcagaatg
gcttccccttgggttaggtgacagggttttcagagcaacttcacaccacc
aactcatgacagagcctctcatccagtcacaacagtcctgtaaagagggc
gttggagggtgcattttactctcagagagccagggcctagggaacattgc
tcccataattatttagggcaggctctacagcttggggggggcacagttat
taatgtctcccatgctgctcccgagtgctccccacttcctaggtcacctc
tgtgacaaccatagtctcatgtcccccatcttccacaaccaagactgagt
aagaatgctcatgtctctcttcctttttctttatctttatttatgtgtat
atataggtcttagatactgttctattgagacatcatgaccaaagtgactt
acataaataaataaataaataaataaataaataaagttgggttacagttc
cagagggctagtctataactatctataaccatggaacagtaacggagact
tatgctgaagacacaaccacaaggcagaggaaaatgactgggaacggtga
ggctttggcgtttcctgatgtgcctcaagcccaccctccactgacacccc
ccctaatcttccaatagttccacacctgggaatcaagcattcagaatgag
tctacggggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_129060096_129060720
seq2: B6Ng01-153A01.b_45_669 (reverse)

seq1  GCCTGAAGGCTGCAGTGGGCTCCTGCTTTCCCAGCTCCTGTGAGCTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGGCTGCAGTGGGCTCCTGCTTTCCCAGCTCCTGTGAGCTTTCA  50

seq1  CTCCTGTTGGATGGTGCCTTTCAGTCATTTCTGCTGCTGTAAGTAGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTGGATGGTGCCTTTCAGTCATTTCTGCTGCTGTAAGTAGCCCA  100

seq1  TCACCCACATTCCTGTAAGTAACCCCAATGAAGTTCATTGTTTCACCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCACATTCCTGTAAGTAACCCCAATGAAGTTCATTGTTTCACCAAG  150

seq1  CTGGACTCTGGTGGTTTCTGTACTTTAGCCTGTCATGGGTTTCCTATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTCTGGTGGTTTCTGTACTTTAGCCTGTCATGGGTTTCCTATCTG  200

seq1  GGTGGGTAGAGAGGAGTATGCTGTGTTCCCCAGGAAGAGTTTTTGTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTAGAGAGGAGTATGCTGTGTTCCCCAGGAAGAGTTTTTGTCACA  250

seq1  CAACAGTGACACACATCTTCAATCCCAGTACCTGGGAGGCAGAGGTAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGACACACATCTTCAATCCCAGTACCTGGGAGGCAGAGGTAGCC  300

seq1  AGAACCACTGTGGGTTCAGGACAGCTTGATCTACATAGATAGTACCAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACTGTGGGTTCAGGACAGCTTGATCTACATAGATAGTACCAGCC  350

seq1  TATCGGGACTGTCAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGGGACTGTCAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAGAAA  400

seq1  AGGAGGAGCTTAGAAGACCAGTTTATGTTGTCTGTTTGTTTAGTTTTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGCTTAGAAGACCAGTTTATGTTGTCTGTTTGTTTAGTTTTAGT  450

seq1  TTGGTGGAATCAAGAGAGTCATAAAGACAATAAAAACCAGCTTGGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGAATCAAGAGAGTCATAAAGACAATAAAAACCAGCTTGGAGATG  500

seq1  CTGAAAATGAGGTATCTCTGTGCTAGAGGCAGACATCTTCATCCTTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATGAGGTATCTCTGTGCTAGAGGCAGACATCTTCATCCTTTCCT  550

seq1  TATGTGTGTCATACAGAAGGACATCTTCATCCTCTCTGTTTGCATGTCCT  600
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGTCATACAGAAGGACATCTTCATCCTCTCTGTTTGCATGTCCT  600

seq1  CCAAAACCCATAATTTTGAGAATTC  625
      |||||||||||||||||||||||||
seq2  CCAAAACCCATAATTTTGAGAATTC  625

seq1: chr4_128957006_128958123
seq2: B6Ng01-153A01.g_69_1179

seq1  GAATTCACTCTGTAGACCAGGCTATCCTCGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTATCCTCGAACTCAGAAATCCACCTGCC  50

seq1  TCCTCTGCCTCTCTGCCTCTCTGCCTCAAGTGCTGAGATTAAAAGCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCCTCTCTGCCTCTCTGCCTCAAGTGCTGAGATTAAAAGCATGT  100

seq1  GCCACCACTTCCTGGCTCAAAGTTTCTAAATAGACAATGATGGCTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACTTCCTGGCTCAAAGTTTCTAAATAGACAATGATGGCTAAAAT  150

seq1  TCTTGGGCCCATGATGAAACTCTTTTTGAGTTCATTCTCACAATAAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGCCCATGATGAAACTCTTTTTGAGTTCATTCTCACAATAAACCT  200

seq1  TTGCTATGAGTTGGGTTGCCCAGTTCTGTGGAGACCAGAGCCAGTGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATGAGTTGGGTTGCCCAGTTCTGTGGAGACCAGAGCCAGTGAGTG  250

seq1  AGGTAGCTTCCCACGAGCACCCAGTGAATGCAGCACAGAGTCAGGCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCTTCCCACGAGCACCCAGTGAATGCAGCACAGAGTCAGGCTCCA  300

seq1  CCTAGCCTCTCGCTTTCCAAGCCTGGATTCATATCCTGCTTCAAGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCTCTCGCTTTCCAAGCCTGGATTCATATCCTGCTTCAAGACACA  350

seq1  GTGACCCTGAGAGTCCTGGAGGGCACCTCAGACCCATTTATTTTCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTGAGAGTCCTGGAGGGCACCTCAGACCCATTTATTTTCTTCCT  400

seq1  CCTTGGGACAGTTTCAGGACAGTGTCACTACAGGAAAGCTGAGCAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGACAGTTTCAGGACAGTGTCACTACAGGAAAGCTGAGCAGAATG  450

seq1  GCTTCCCCTTGGGTTAGGTGACAGGGTTTTCAGAGCAACTTCACACCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCCTTGGGTTAGGTGACAGGGTTTTCAGAGCAACTTCACACCACC  500

seq1  AACTCATGACAGAGCCTCTCATCCAGTCACAACAGTCCTGTAAAGAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGACAGAGCCTCTCATCCAGTCACAACAGTCCTGTAAAGAGGGC  550

seq1  GTTGGAGGGTGCATTTTACTCTCAGAGAGCCAGGGCCTAGGGAACATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGGGTGCATTTTACTCTCAGAGAGCCAGGGCCTAGGGAACATTGC  600

seq1  TCCCATAATTATTTAGGGCAGGCTCTACAGCTTGGGGGGGGCACAGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAATTATTTAGGGCAGGCTCTACAGCTTGGGGGGGGCACAGTTAT  650

seq1  TAATGTCTCCCATGCTGCTCCCGAGTGCTCCCCACTTCCTAGGTCACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTCCCATGCTGCTCCCGAGTGCTCCCCACTTCCTAGGTCACCTC  700

seq1  TGTGACAACCATAGTCTCATGTCCCCCATCTTCCACAACCAAGACTGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAACCATAGTCTCATGTCCCCCATCTTCCACAACCAAGACTGAGT  750

seq1  AAGAATGCTCATGTCTCTCTTCCTTTTTCTTTATCTTTATTTATGTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGCTCATGTCTCTCTTCCTTTTTCTTTATCTTTATTTATGTGTAT  800

seq1  ATATAGGTCTTAGATACTGTTCTATTGAGACATCATGACCAAGGTGACTT  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATATAGGTCTTAGATACTGTTCTATTGAGACATCATGACCAAAGTGACTT  850

seq1  ACATAAATAAATAAATAAATAAATAAATAAATAAAGTTTGGTTACAGTTC  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACATAAATAAATAAATAAATAAATAAATAAATAAAGTTGGGTTACAGTTC  900

seq1  CAGAGGGCTAGTCTATAACTATCTATAACCATGGAACAGTAACGGAGAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAGAGGGCTAGTCTATAACTATCTATAACCATGGAACAGTAACGGAG-AC  949

seq1  TTATGCTG-AGACAACAACCACAAGGCAGAGGAAAATGACTGGGAACGGT  999
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGAAGAC-ACAACCACAAGGCAGAGGAAAATGACTGGGAACGGT  998

seq1  GAGGGCTTTGGCGTTTCCTGATGTTGCCTCAAAGCCCA-CCTCCACTGAC  1048
      || |||||||||||||||||||| |||||| ||||||| |||||||||||
seq2  GA-GGCTTTGGCGTTTCCTGATG-TGCCTC-AAGCCCACCCTCCACTGAC  1045

seq1  A-CACCCCTAATCCTTCCCAAATAGTTCCACCACCTGGG-ATCAAGCATT  1096
      | | |||||||| |||||  |||||||||| |||||||| ||||||||||
seq2  ACCCCCCCTAAT-CTTCC--AATAGTTCCA-CACCTGGGAATCAAGCATT  1091

seq1  CGAATATGAGTCTACAGGGGCC  1118
      | |  |||||||||| ||||||
seq2  C-AGAATGAGTCTAC-GGGGCC  1111