BAC Information

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BAC

Clone NameB6Ng01-153E11
Chromosome4 (Build37)
Map Location 35,292,016 - 35,292,594
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039220, LOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga, Mobkl2b, Ifnk, 3110043O21Rik, LOC620559
Downstream geneLOC621227, Lingo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153E11.bB6Ng01-153E11.g
ACCDH948638DH948639
length5731,064
definitionDH948638|Mus musculus domesticus DNA, BAC clone: B6Ng01-153E11, 5' end.DH948639|Mus musculus domesticus DNA, BAC clone: B6Ng01-153E11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actatgtcagagtgattatggtccagagaagctaggtgttaagaggagag
catttcatccaaggtcacctttaagcagaaattataaacctttaaaaaga
agttacttttcttcccagtgggaggctagtagtgattgctaaggtgactc
tcatttataagaaggtgctgtaaaagttcctgacagccattgttcctgta
atcagctccttttccactgttctgaaattactttcaaggtagagcacaaa
cacatttatagtagtttttatggcttgctccccatatatagtgcctctcc
agtccacattttattcagtataggttagattacaaacagggctgaactta
ttacccatattagtcaaggatacaaagtcagagaatagattgaagtgggt
gttttcttagggaaccaagaagatatgtcagaccccatcttctggatttt
atctcttaagacatccactttgcagttgacaagattcaactctacatatt
tccttctttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttctcctcctcctcctcctcc
gaattctcatctgaggaatactgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaatttggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatcttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggacacagaaaatgtggtaaatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatttactcactgataagtggatattagcccagaaac
ttaggatacccaacttatacgatacaatttgctaaaagcattaaactcaa
gaagaaagaagaccaaagtgtggacactttgctccttcttagaattggga
acaaaacacccatggaaggaattacagaggcaaagtttggagctgtgagg
aaaggatggaccatctagagactgccatatccagggatccatcccataat
cagtttccaaacgctgacaccattgaatacactaacaaattttgctgaaa
ggacccagatatagctgtctcttttgagactgtgccggggctagcaacac
cgaagtgaatgtcatagtcagttattggatggatcacaggttccccatga
ggagcttgagaatttacccagagctaagtgatctcaacctttagttggac
acatattgaacttactatacctcaatctcttgtatcttcctgcgactttt
tcaaaaaaatgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_35292016_35292594
seq2: B6Ng01-153E11.b_49_627

seq1  GAATTCACTATGTCAGAGTGATTATGGTCCAGAGAAGCTAGGTGTTAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTCAGAGTGATTATGGTCCAGAGAAGCTAGGTGTTAAGA  50

seq1  GGAGAGCATTTCATCCAAGGTCACCTTTAAGCAGAAATTATAAACCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCATTTCATCCAAGGTCACCTTTAAGCAGAAATTATAAACCTTTA  100

seq1  AAAAGAAGTTACTTTTCTTCCCAGTGGGAGGCTAGTAGTGATTGCTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGTTACTTTTCTTCCCAGTGGGAGGCTAGTAGTGATTGCTAAGG  150

seq1  TGACTCTCATTTATAAGAAGGTGCTGTAAAAGTTCCTGACAGCCATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCATTTATAAGAAGGTGCTGTAAAAGTTCCTGACAGCCATTGTT  200

seq1  CCTGTAATCAGCTCCTTTTCCACTGTTCTGAAATTACTTTCAAGGTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATCAGCTCCTTTTCCACTGTTCTGAAATTACTTTCAAGGTAGAG  250

seq1  CACAAACACATTTATAGTAGTTTTTATGGCTTGCTCCCCATATATAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACATTTATAGTAGTTTTTATGGCTTGCTCCCCATATATAGTGC  300

seq1  CTCTCCAGTCCACATTTTATTCAGTATAGGTTAGATTACAAACAGGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTCCACATTTTATTCAGTATAGGTTAGATTACAAACAGGGCTG  350

seq1  AACTTATTACCCATATTAGTCAAGGATACAAAGTCAGAGAATAGATTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATTACCCATATTAGTCAAGGATACAAAGTCAGAGAATAGATTGAA  400

seq1  GTGGGTGTTTTCTTAGGGAACCAAGAAGATATGTCAGACCCCATCTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGTTTTCTTAGGGAACCAAGAAGATATGTCAGACCCCATCTTCTG  450

seq1  GATTTTATCTCTTAAGACATCCACTTTGCAGTTGACAAGATTCAACTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATCTCTTAAGACATCCACTTTGCAGTTGACAAGATTCAACTCTA  500

seq1  CATATTTCCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  550

seq1  TCTTCTTCTTCTCCTCCTCCTCCTCCTCC  579
      |||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTCCTCCTCCTCCTCCTCC  579