BAC Information

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BAC

Clone NameB6Ng01-153F09
Chromosome4 (Build37)
Map Location 151,119,605 - 151,245,275
singlet/doubletdoublet
Overlap geneCamta1, LOC100041960
Upstream geneLOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneDnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153F09.bB6Ng01-153F09.g
ACCDH948678DH948679
length142751
definitionDH948678|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F09, 5' end.DH948679|Mus musculus domesticus DNA, BAC clone: B6Ng01-153F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,245,130 - 151,245,275)(151,119,605 - 151,120,354)
sequence
gaattctggattctgactctctcacctaacccccccactcctgcatcttt
aagtgcaatactggtaactaaatttctctttctctctctctcttcctttc
tttcttccttccttccttccttccttccttccttccttcctt
gaattcagttccaagcacccatgttgggcagcttacaaccacctaccatt
tcagctccagggaatcctgcctcctcttctggcttctgccactgcctgct
tgcacatgtgcacacacttacatgcagatgtgcatatagacacacactgt
tatggtttgtatatgtttggcccagggagtggcactgttgagaggtgtgg
tcttgttggggtaggtgtgtcactgagggtgtgggctttaatacccttct
cttagctgccttggaaccagtatcctgctagtagtcttcagatgaagatt
agagctctcaagccgctcctgtaccatgcctgcctggatgctgccatgtt
cccaccttgatgaacttgtaagccagccccaatgatgttgtcctttataa
gagttgccttggtcatggtgtctgttcacagcagtaaaaccctaactaag
acatacaaaataaaaaaaaaaaatcttaagtttttaaaactctgttaatg
taaaatggtctataatggcaaaaggcaaacccacagctgcctagtagagg
gcatgcctgtaaggtggcactgggcgcgcatggctagggagggcaggaca
gccttcctgtcttggttcattgtcgaaatgccctgactcaccacgttgtc
catttcttgatgcagcttattacctgtcaatcaagctccagggaagcttt
tgtgttttaatgtgcaagaaaacattgccctgtgggggttgtgtgatgag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151245130_151245275
seq2: B6Ng01-153F09.b_42_183 (reverse)

seq1  AAGGAAGGAAGGAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGAAAGAAA  50
          ||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  ----AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAA  46

seq1  GGAAGAGAGAGAGAGAAAGAGAAATTTAGTTACCAGTATTGCACTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAGAGAGAGAAAGAGAAATTTAGTTACCAGTATTGCACTTAAAG  96

seq1  ATGCAGGAGTGGGGGGGTTAGGTGAGAGAGTCAGAATCCAGAATTC  146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGAGTGGGGGGGTTAGGTGAGAGAGTCAGAATCCAGAATTC  142

seq1: chr4_151119605_151120354
seq2: B6Ng01-153F09.g_73_823

seq1  GAATTCAGTTCCAAGCACCCATGTTGGGCAGCTTACAACCACCTACCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCAAGCACCCATGTTGGGCAGCTTACAACCACCTACCATT  50

seq1  TCAGCTCCAGGGAATCCTGCCTCCTCTTCTGGCTTCTGCCACTGCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCAGGGAATCCTGCCTCCTCTTCTGGCTTCTGCCACTGCCTGCT  100

seq1  TGCACATGTGCACACACTTACATGCAGATGTGCATATAGACACACACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGTGCACACACTTACATGCAGATGTGCATATAGACACACACTGT  150

seq1  TATGGTTTGTATATGTTTGGCCCAGGGAGTGGCACTGTTGAGAGGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTGTATATGTTTGGCCCAGGGAGTGGCACTGTTGAGAGGTGTGG  200

seq1  TCTTGTTGGGGTAGGTGTGTCACTGAGGGTGTGGGCTTTAATACCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTGGGGTAGGTGTGTCACTGAGGGTGTGGGCTTTAATACCCTTCT  250

seq1  CTTAGCTGCCTTGGAACCAGTATCCTGCTAGTAGTCTTCAGATGAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTGCCTTGGAACCAGTATCCTGCTAGTAGTCTTCAGATGAAGATT  300

seq1  AGAGCTCTCAAGCCGCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTCAAGCCGCTCCTGTACCATGCCTGCCTGGATGCTGCCATGTT  350

seq1  CCCACCTTGATGAACTTGTAAGCCAGCCCCAATGATGTTGTCCTTTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTGATGAACTTGTAAGCCAGCCCCAATGATGTTGTCCTTTATAA  400

seq1  GAGTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCCTAACTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCCTAACTAAG  450

seq1  ACATACAAAATAAAAAAAAAAAATCTTAAGTTTTTAAAACTCTGTTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAAAATAAAAAAAAAAAATCTTAAGTTTTTAAAACTCTGTTAATG  500

seq1  TAAAATGGTCTATAATGGCAAAAGGCAAACCCACAGCTGCCTAGAAGAGG  550
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAAATGGTCTATAATGGCAAAAGGCAAACCCACAGCTGCCTAGTAGAGG  550

seq1  GCATGCCTGTAAGGTGGCACT-GGCGCGCATGGCTAGGGAGGGCAGGACA  599
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCATGCCTGTAAGGTGGCACTGGGCGCGCATGGCTAGGGAGGGCAGGACA  600

seq1  GCCTTCCTGTCTTGGTTCATTGTTCGAAATGCCCTGACTCACCACGTTGT  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCCTTCCTGTCTTGGTTCATTG-TCGAAATGCCCTGACTCACCACGTTGT  649

seq1  CCA-TTCTTGATGCAGCTTAGTACCTGTCAATCAAGCTCCAGGGAAGCTT  698
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCATTTCTTGATGCAGCTTATTACCTGTCAATCAAGCTCCAGGGAAGCTT  699

seq1  TTGTGTTTAAGTGTGCAATGAAAGCATTGCCCTGT-GGGGTTGTGTGAGG  747
      |||||||| | ||||||| |||| ||||||||||| |||||||||||| |
seq2  TTGTGTTTTAATGTGCAA-GAAAACATTGCCCTGTGGGGGTTGTGTGATG  748

seq1  AGG  750
      |||
seq2  AGG  751