BAC Information

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BAC

Clone NameB6Ng01-153H19
Chromosome4 (Build37)
Map Location 78,964,926 - 78,965,444
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040026, LOC100040036
Downstream geneLOC667922
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153H19.bB6Ng01-153H19.g
ACCDH948786DH948787
length402819
definitionDH948786|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H19, 5' end.DH948787|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tagaaagcctttaatttttctttatttcttctctgacccagtgatcattc
atcacagtgtttttcagtttctatgagcatgtaggcttctgttgtttctg
ttgttgaaatttacctttaatctatgtgatctgataaggggttgtttcaa
gtgtcttttatgtgttgaggctggctttgtgactgagtgagtacatggtt
agttttggaaaagattccaagaggtgctgaaagaaggtgtaatcttttgt
gtttaggtgaaatgttctgtagatgtctattaggtcaattttatttatag
tctctgttagattcctaatatgtttgttgcatttctttctcagtaatctg
tcaatgggagagagttcatgttcaaggtttccactattaatgtttagggt
gt
gaattctgataggaattgcattgaatccgtagattgcatttggtaaaatg
gccattttcagtatgttaatattaccaatccatgaacatgagatatcatt
atgtcttctgttgtcttcgttgatttctttctttgaggatctgaagttct
tgcagtgatggggtcaccaatcaaccttcaaaactttcaacccaaaatta
ttcctgtctaaaagaaattcagggacaaatatgtatcagagtcagaataa
atggctgactagtcactggcacaacttggcatccattctatgtaccaaac
tatgacactattactaatgctgtgttgttcttccaaacaggagcctagca
tggctttcctctgagaatctccaccaacagctaactgagacagtaacaga
tgcttgcagcagtgcattggaataaggtcatggtactctgtgaagagaga
gaagaaaaaaaaaataaaggaatgaacagaagggatgacaacaatgtaaa
ctaacttggaaccctgggaaactaagaagccaactaaagatcatacacgg
gctggtgcaaggtccctggcatatatgtagcacagggacttgccttgttt
ggcctcagtagaagatggtgtatctaatggtgtagaaagttgatgttcca
gggaggggggcagggatgccagagaggcactcttttcagaggcaaaagca
aggtaggtatggaggaagaaattccgtgaggcagaacagctataggggac
aacatttggggatgttaattaataaattaataaataataaaacttgtaaa
atagaaatcccccgcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_78964926_78965444
seq2: B6Ng01-153H19.g_360_885 (reverse)

seq1  CAGTGCGGGTGATTTCTATTTTACAATGTTTATTA-TTATTAATTTATTA  49
      ||||||||| ||||||||||||||||  ||||||| ||||||||||||||
seq2  CAGTGCGGGGGATTTCTATTTTACAAGTTTTATTATTTATTAATTTATTA  50

seq1  ATTAACAT-CCCAAATGTTGT-CCCTCCTGCTGTTCTGCCTCACGGAA-T  96
      |||||||| |||||||||||| ||||   ||||||||||||||||||| |
seq2  ATTAACATCCCCAAATGTTGTCCCCTATAGCTGTTCTGCCTCACGGAATT  100

seq1  TCTTCCTCCATTCCT-CCTTGCTTTTGCCTCTG-AAAGGGTGCCTCTCTG  144
      ||||||||||| ||| ||||||||||||||||| |||| |||||||||||
seq2  TCTTCCTCCATACCTACCTTGCTTTTGCCTCTGAAAAGAGTGCCTCTCTG  150

seq1  GCATCCCTGCCCCCCTCCCTGGAACATCAACTTTCTACACCATTAGATAC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCTGCCCCCCTCCCTGGAACATCAACTTTCTACACCATTAGATAC  200

seq1  ACCATCTTCTACTGAGGCCAAACAAGGCAAGT-CCTGTGCTACATATATG  243
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCATCTTCTACTGAGGCCAAACAAGGCAAGTCCCTGTGCTACATATATG  250

seq1  CCAGGGACCTTGCACCAGCCCGTGTATGATCTTTAGTTGGCTTCTTAGTT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGACCTTGCACCAGCCCGTGTATGATCTTTAGTTGGCTTCTTAGTT  300

seq1  TCCCAGGGTTCCAAGTTAGTTTACATTGTTGTCATCCCTTCTGTTCATTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGTTCCAAGTTAGTTTACATTGTTGTCATCCCTTCTGTTCATTC  350

seq1  CTTTATTTTTTTTTTCTTCTCTCTCTTCACAGAGTACCATGACCTTATTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTTTTTTTCTTCTCTCTCTTCACAGAGTACCATGACCTTATTC  400

seq1  CAATGCACTGCTGCAAGCATCTGTTACTGTCTCAGTTAGCTGTTGGTGGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCACTGCTGCAAGCATCTGTTACTGTCTCAGTTAGCTGTTGGTGGA  450

seq1  GATTCTCAGAGGAAAGCCATGCTAGGCTCCTGTTTGGAAGAACAACACAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCAGAGGAAAGCCATGCTAGGCTCCTGTTTGGAAGAACAACACAG  500

seq1  CATTAGTAATAGTGTCATAGTTTGGT  519
      ||||||||||||||||||||||||||
seq2  CATTAGTAATAGTGTCATAGTTTGGT  526