BAC Information

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BAC

Clone NameB6Ng01-154A20
Chromosome4 (Build37)
Map Location 7,369,322 - 7,531,586
singlet/doubletdoublet
Overlap genenone
Upstream geneNsmaf, LOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154A20.bB6Ng01-154A20.g
ACCDH949199DH949200
length1,132984
definitionDH949199|Mus musculus domesticus DNA, BAC clone: B6Ng01-154A20, 5' end.DH949200|Mus musculus domesticus DNA, BAC clone: B6Ng01-154A20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,369,322 - 7,370,470)(7,530,951 - 7,531,586)
sequence
gaattcagaaagtatcataagaagaaggcaacaaagtacaaactctgtcc
tatgggaagtatatacaattatcttaaaggaaaaattctaaatgaatctt
tgcaataagggaagaaattttagaagttagtattcatttcatgttaatac
aaaaaagaagcaattaaatcaaaataagtgtctgagagtttcattgctgt
gaagagacagcatgactacagttactcttacaaaggacaacatttaattg
aggctggcttcgaattcagaggtttagtccattgttgtcacagtgggaag
catggaagcccaggcagataaggtcctggagatggagctgagaattctac
atctacatctgcaggaatcaggcaaagaactgtcttgagcatctgagatt
tcaaagcacattgctaaatgacaccctgtctccaactaagccacacctaa
cccaacaaggtgatgccaatgacagaggggctacacttaaaagcaatgtg
tgctgaaaatgaagtacaagaaaaaatgatttttcacaacaagattttta
tatatagtgtaagactatcctcagattcctaggtcaatacacacacacac
acacacacacacacagagagagagagagagagagagagagagagagagag
agagagagagagagagagagagatttccttaatttcttttgtttttaacc
aggcaagtgcatttactgaaacaaaggaatgacagcagttggtcatcatt
tgaaattggaccatatcgactacagcatcaacctaccagccacaatggat
ccactggtgcaagagtagcacaagtgttcaggtgttagcaaccaccctcc
ttataagattttatggctgtgacacaggaggagatttatgtctgttatta
taaacatggctagaagccataggccatagaagaaaacctacttatgttct
aaatagtgatgtggtgaagataccttctatatattgtgtttacatccaca
tttgtgatacatactcccatatttattacagagctcttatttgtggatat
gattatatagagatgctttgctgtgtatactctagtgagcaatttggatc
cctcattctatgatgtctacataactctgccc

gaattccttctcccagcttttctcatctatgcttattcaaaattttttct
ttccagtatagtctttagtttttattgtatattgaatagtatgttccaaa
ttttagaggagcaattttaaatattaactgtgtttaaagaaaaacactga
aaaataaaacttctgatttggtgatgtttctgactcttaaaaaaaaatca
caaaattttcttctgtgtcaactgctaacgaatctgtgtcccctcatcct
cggcatctgctgatggccttgttgactgtttaacgctgagctagtctgta
taacttaaagaaatctcattaggtcatgacgtatgattgtttgtctacgt
tgctaaactggatttgctgattctgtattgtgcagtttgtgattaatttg
gtggcagctttctttttgtctgattataatattgattccatgaagtttac
cagcactattatttctacatattaatataagaggtttgtaaaattgatgt
taatatttaaatgcctggaaaaattctgtaggagtatcatttactacgaa
agatttctaagagctcgattttaaatataaattcaattttgaaataacaa
gctattcaggttacctctttcatcttggctgaatttctatgccctgttct
tcttaggaacttggtacatttattttaaattgttgcacttattattatac
agcatttcatcatatctagtgatcatttctttaatagctgaataatccat
agtatatcctctgctctttcttcaaactggaacttcataccttctgtctt
aatgtttcatcagtcttgctagaggcttctcaattttattggcttttctg
aagaagcaggttttgtttcattacatttttcattgtttaaatgccattga
tgtttccttttacacatttccttctttctgctcactcagcctggtagctc
tactactctagtgtatgatgtaggactagatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7369322_7370470
seq2: B6Ng01-154A20.b_42_1173

seq1  GAATTCAGAAAGTATCATAAGAAGAAGGCAACAAAGTACAAACTCTGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGTATCATAAGAAGAAGGCAACAAAGTACAAACTCTGTCC  50

seq1  TATGGGAAGTATATACAATTATCTTAAAGGAAAAATTCTAAATGAATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAAGTATATACAATTATCTTAAAGGAAAAATTCTAAATGAATCTT  100

seq1  TGCAATAAGGGAAGAAATTTTAGAAGTTAGTATTCATTTCATGTTAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAAGGGAAGAAATTTTAGAAGTTAGTATTCATTTCATGTTAATAC  150

seq1  AAAAAAGAAGCAATTAAATCAAAATAAGTGTCTGAGAGTTTCATTGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAGCAATTAAATCAAAATAAGTGTCTGAGAGTTTCATTGCTGT  200

seq1  GAAGAGACAGCATGACTACAGTTACTCTTACAAAGGACAACATTTAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACAGCATGACTACAGTTACTCTTACAAAGGACAACATTTAATTG  250

seq1  AGGCTGGCTTCGAATTCAGAGGTTTAGTCCATTGTTGTCACAGTGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCTTCGAATTCAGAGGTTTAGTCCATTGTTGTCACAGTGGGAAG  300

seq1  CATGGAAGCCCAGGCAGATAAGGTCCTGGAGATGGAGCTGAGAATTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAGCCCAGGCAGATAAGGTCCTGGAGATGGAGCTGAGAATTCTAC  350

seq1  ATCTACATCTGCAGGAATCAGGCAAAGAACTGTCTTGAGCATCTGAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACATCTGCAGGAATCAGGCAAAGAACTGTCTTGAGCATCTGAGATT  400

seq1  TCAAAGCACATTGCTAAATGACACCCTGTCTCCAACTAAGCCACACCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCACATTGCTAAATGACACCCTGTCTCCAACTAAGCCACACCTAA  450

seq1  CCCAACAAGGTGATGCCAATGACAGAGGGGCTACACTTAAAAGCAATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAAGGTGATGCCAATGACAGAGGGGCTACACTTAAAAGCAATGTG  500

seq1  TGCTGAAAATGAAGTACAAGAAAAAATGATTTTTCACAACAAGATTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAATGAAGTACAAGAAAAAATGATTTTTCACAACAAGATTTTTA  550

seq1  TATATAGTGTAAGACTATCCTCAGATTCCTAGGTCAATACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTGTAAGACTATCCTCAGATTCCTAGGTCAATACACACACACAC  600

seq1  ACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  650

seq1  AGAGAGAGAGAGAGAGAGAGAGATTTCCTTAATTTCTTTTGTTTTTAACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGATTTCCTTAATTTCTTTTGTTTTTAACC  700

seq1  AGGCAAGTGCATTTACTGAAACAAAGGAATGACAGCAGTTGGTCATCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGTGCATTTACTGAAACAAAGGAATGACAGCAGTTGGTCATCATT  750

seq1  TGAAATTGGACCATATCGACTACAGCATCAACCTACCAGCCACAATGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGGACCATATCGACTACAGCATCAACCTACCAGCCACAATGGAT  800

seq1  CCACTGGTGCAAGAGTAGCACAAGTGTTCAGGTGTTAGCAACCACCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGTGCAAGAGTAGCACAAGTGTTCAGGTGTTAGCAACCACCCTCC  850

seq1  TTATAAGATTTTATGGCTGTGACACAGGAGGAGATTTATGTCTGTTATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGATTTTATGGCTGTGACACAGGAGGAGATTTATGTCTGTTATTA  900

seq1  TAAACATGGCTAAGAAGCCATAGGCCATAGAAGAAAACCTACTTATGTTC  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGGCT-AGAAGCCATAGGCCATAGAAGAAAACCTACTTATGTTC  949

seq1  TAAATAGTGATGTGGTTGAAGAATACCTTCTATATATTGTTGTTTACATC  1000
      ||||||||||||||| ||||| ||||||||||||||||| ||||||||||
seq2  TAAATAGTGATGTGG-TGAAG-ATACCTTCTATATATTG-TGTTTACATC  996

seq1  CAACATTTGTGATACATACTCCCAATATTTATTACAGAAGCTCCTTATTT  1050
      | ||||||||||||||||||||| ||||||||||||| |||| |||||||
seq2  C-ACATTTGTGATACATACTCCC-ATATTTATTACAG-AGCT-CTTATTT  1042

seq1  GTGGATAATGATTAATATAGAGATGCTTTGCTGTGTATTACTCTAGTGAG  1100
      |||||| |||||| ||||||||||||||||||||||| ||||||||||||
seq2  GTGGAT-ATGATT-ATATAGAGATGCTTTGCTGTGTA-TACTCTAGTGAG  1089

seq1  CCAATTTGGATCACTCAATCCTAAATGATGTCTACATTAAACTCTGCCC  1149
       ||||||||||| |||| ||    |||||||||||||  ||||||||||
seq2  -CAATTTGGATCCCTCATTC---TATGATGTCTACAT--AACTCTGCCC  1132


seq1: chr4_7530951_7531586
seq2: B6Ng01-154A20.g_62_697 (reverse)

seq1  AAATTCAGCCAAGATGAAAGAGGTAACCTGAATAGCTTGTTATTTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGCCAAGATGAAAGAGGTAACCTGAATAGCTTGTTATTTCAAAA  50

seq1  TTGAATTTATATTTAAAATCGAGCTCTTAGAAATCTTTCGTAGTAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTATATTTAAAATCGAGCTCTTAGAAATCTTTCGTAGTAAATGA  100

seq1  TACTCCTACAGAATTTTTCCAGGCATTTAAATATTAACATCAATTTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTACAGAATTTTTCCAGGCATTTAAATATTAACATCAATTTTACA  150

seq1  AACCTCTTATATTAATATGTAGAAATAATAGTGCTGGTAAACTTCATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTTATATTAATATGTAGAAATAATAGTGCTGGTAAACTTCATGGA  200

seq1  ATCAATATTATAATCAGACAAAAAGAAAGCTGCCACCAAATTAATCACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATTATAATCAGACAAAAAGAAAGCTGCCACCAAATTAATCACAA  250

seq1  ACTGCACAATACAGAATCAGCAAATCCAGTTTAGCAACGTAGACAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACAATACAGAATCAGCAAATCCAGTTTAGCAACGTAGACAAACAA  300

seq1  TCATACGTCATGACCTAATGAGATTTCTTTAAGTTATACAGACTAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACGTCATGACCTAATGAGATTTCTTTAAGTTATACAGACTAGCTCA  350

seq1  GCGTTAAACAGTCAACAAGGCCATCAGCAGATGCCGAGGATGAGGGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTAAACAGTCAACAAGGCCATCAGCAGATGCCGAGGATGAGGGGACA  400

seq1  CAGATTCGTTAGCAGTTGACACAGAAGAAAATTTTGTGATTTTTTTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCGTTAGCAGTTGACACAGAAGAAAATTTTGTGATTTTTTTTTAA  450

seq1  GAGTCAGAAACATCACCAAATCAGAAGTTTTATTTTTCAGTGTTTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAAACATCACCAAATCAGAAGTTTTATTTTTCAGTGTTTTTCTT  500

seq1  TAAACACAGTTAATATTTAAAATTGCTCCTCTAAAATTTGGAACATACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACAGTTAATATTTAAAATTGCTCCTCTAAAATTTGGAACATACTA  550

seq1  TTCAATATACAATAAAAACTAAAGACTATACTGGAAAGAAAAAATTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATACAATAAAAACTAAAGACTATACTGGAAAGAAAAAATTTTGA  600

seq1  ATAAGCATAGATGAGAAAAGCTGGGAGAAGGAATTC  636
      ||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATAGATGAGAAAAGCTGGGAGAAGGAATTC  636


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