BAC Information

Click to search

BAC

Clone NameB6Ng01-154B02
Chromosome4 (Build37)
Map Location 97,161,870 - 97,162,871
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
Downstream geneLOC620883, EG638698, Nfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154B02.bB6Ng01-154B02.g
ACCDH949211DH949212
length1,0961,150
definitionDH949211|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B02, 5' end.DH949212|Mus musculus domesticus DNA, BAC clone: B6Ng01-154B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattcattctcatggccatattgccatctctcctttccctccaa
tcctgaaccctccagtcacatttttctccacatctcctctcccacccagt
tctctccctccatctgcctcctacgactattttattccctcttctaggtg
agatttaaacatccttgcctgagctttccttatttagcttcactgaatag
tgtgtgtatcctgtgttttgtgggtaatatcaatttataagtgagtgaat
gccatgcatttctcagttaactcactcagaatattctcaagttccatata
tttgcctggaaacactcaagatgcctttgtttttaatagctgaatagtat
tccattgcatagatgtaacatattttctttatccatttttcagttgaggg
atgtctaggttgttttcagtttttatctcttatgggtaaacaaagctgct
gctatgaacatagttgagctagtgttcctgtggtatagcggggcatttct
tggctatatgccccagagtggtatatctgggtcttgaattaggactatcc
ccagttttctgataaactgtcaaattgatttccaaagtgggaacacacat
actattatcaccggtttacatttactttcctacaacatttataccaaacc
tcttcacgactctcagtcagagggttttatttagaagggttttattttat
ttaattactttagcaaaagaaattaaaacacagaaccagcactgaagtgc
tactacatcaactcatggctcctgttttcaactccataatctggtaatac
ttgattatttaatattctttctttaaagaccaaaccaaatgaaatgaaaa
aagctagatccatagagaccaacttttgttggccaaggacttctgagcat
ggtacctaccctggagtgtggttgttatatttggtgttactacagtaaag
aaacgtctttttcctctttgagtagtagcatttgcaaatagctttttgac
tagaagtagacttcatgtccatttccctttcttcatcggtcttgtctagc
ttgaactccttacaggtctggtgcaatgctttcatagtctctgtga
gaattcaaatagatccgttgcatttgtgtgtgtgtgcatgtgtgtgtgtg
agagagagcctgcacaaaattgaagtccaagtgaatcaataagacttgaa
tataaagccagccacactaaatctgataagaagagaaaatgggtaacaga
cttgaaagcactggcacgggagaaagcttcctaaatagaacaccaacagc
ttgagcactaagatcaacaactaagaaataggaaacagaaaactttctgt
aaggctataggacactggctataggacaaaatgccaggctacagaatgga
aaaagattgttaccaactccacatctgtcagaaggttaatattcaaaata
tacaaagaattcaagaaactagacatcaacaagacaaatatcccaattaa
aaatgggatacagctctatacagagaattctggaagaagaatcttgaatg
gagcacttaaagaaatgttcaacattcttgccaatcagagaattgcaaat
aaaaatgactctgagattccatcttatacagtcagaatgactaagataaa
aagttcaagcatactcaagaatactccattgctgttgggagtgcaaacct
ttgcaaccactttggaaattaatttggtgatttctcagaaagttgccaat
agatctacatcaagaaccagctataccactcctgggcatatacccaaaag
atttcccagcatcccacaaacacttgctcaactatgcttatagtagcata
ctgccagaaactggaaacaacctagatgtccctcaacaaaagagtggcta
aataaaatgtggtacatttacacagtggaatattactcagccattaaaaa
caaggacatcatgaaggttgtaagcaaatggatggaaatagaaatgatca
tcttgagtcatgtaacccagacccaaaagataaaaagagtatatgtactc
tagtatttgtagatatgagtcataggtacagatgatcatgctacacatca
caaatcaaagtagctactagtagcaaaaatgtcccagtagaaacatgatc
ttgctaaggaaaatagatgttttgtgttattggatttttttcaacagctg
agataatactcaatggataaattttttagttggttgttgtttgggggctg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_97161870_97162871
seq2: B6Ng01-154B02.b_141_1143 (reverse)

seq1  TCACAGAGACTATGACAGCA-TGCACAAGACCTGT-AGGAGTTCAAGCTA  48
      ||||||||||||||| |||| ||||| |||||||| ||||||||||||||
seq2  TCACAGAGACTATGAAAGCATTGCACCAGACCTGTAAGGAGTTCAAGCTA  50

seq1  GACAAGA-CGATGAAGGAAGGGAAATGGACATGAAGTTCTACTTCTAGTC  97
      ||||||| |||||||| ||||||||||||||||||| |||||||||||||
seq2  GACAAGACCGATGAAGAAAGGGAAATGGACATGAAG-TCTACTTCTAGTC  99

seq1  AAAAAGCTATTTGCAAATGCTACTACTCAAAGAGGAAAAAGACGTTTTCT  147
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAAGCTATTTGCAAATGCTACTACTCAAAGAGGAAAAAGACG-TTTCT  148

seq1  TTACTGTAGTAACACCAAATATAACAACCACACTCCAGGGTAGGTACCAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTAGTAACACCAAATATAACAACCACACTCCAGGGTAGGTACCAT  198

seq1  GCTCAGAAGTCCTTGGCCAACAAAAGTTGGTCTCTATGGATCTAGCTTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAAGTCCTTGGCCAACAAAAGTTGGTCTCTATGGATCTAGCTTTT  248

seq1  TTCATTTCATTTGGTTTGGTCTTTAAAGAAAGAATATTAAATAATCAAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCATTTGGTTTGGTCTTTAAAGAAAGAATATTAAATAATCAAGT  298

seq1  ATTACCAGATTATGGAGTTGAAAACAGGAGCCATGAGTTGATGTAGTAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCAGATTATGGAGTTGAAAACAGGAGCCATGAGTTGATGTAGTAGC  348

seq1  ACTTCAGTGCTGGTTCTGTGTTTTAATTTCTTTTGCTAAAGTAATTAAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTGCTGGTTCTGTGTTTTAATTTCTTTTGCTAAAGTAATTAAAT  398

seq1  AAAATAAAACCCTTCTAAATAAAACCCTCTGACTGAGAGTCGTGAAGAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACCCTTCTAAATAAAACCCTCTGACTGAGAGTCGTGAAGAGG  448

seq1  TTTGGTATAAATGTTGTAGGAAAGTAAATGTAAACCGGTGATAATAGTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATAAATGTTGTAGGAAAGTAAATGTAAACCGGTGATAATAGTAT  498

seq1  GTGTGTTCCCACTTTGGAAATCAATTTGACAGTTTATCAGAAAACTGGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCCCACTTTGGAAATCAATTTGACAGTTTATCAGAAAACTGGGG  548

seq1  ATAGTCCTAATTCAAGACCCAGATATACCACTCTGGGGCATATAGCCAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCCTAATTCAAGACCCAGATATACCACTCTGGGGCATATAGCCAAG  598

seq1  AAATGCCCCGCTATACCACAGGAACACTAGCTCAACTATGTTCATAGCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCCGCTATACCACAGGAACACTAGCTCAACTATGTTCATAGCAG  648

seq1  CAGCTTTGTTTACCCATAAGAGATAAAAACTGAAAACAACCTAGACATCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTGTTTACCCATAAGAGATAAAAACTGAAAACAACCTAGACATCC  698

seq1  CTCAACTGAAAAATGGATAAAGAAAATATGTTACATCTATGCAATGGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTGAAAAATGGATAAAGAAAATATGTTACATCTATGCAATGGAAT  748

seq1  ACTATTCAGCTATTAAAAACAAAGGCATCTTGAGTGTTTCCAGGCAAATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCAGCTATTAAAAACAAAGGCATCTTGAGTGTTTCCAGGCAAATA  798

seq1  TATGGAACTTGAGAATATTCTGAGTGAGTTAACTGAGAAATGCATGGCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAACTTGAGAATATTCTGAGTGAGTTAACTGAGAAATGCATGGCAT  848

seq1  TCACTCACTTATAAATTGATATTACCCACAAAACACAGGATACACACACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACTTATAAATTGATATTACCCACAAAACACAGGATACACACACT  898

seq1  ATTCAGTGAAGCTAAATAAGGAAAGCTCAGGCAAGGATGTTTAAATCTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGAAGCTAAATAAGGAAAGCTCAGGCAAGGATGTTTAAATCTCA  948

seq1  CCTAGAAGAGGGAATAAAATAGTCGTAGGAGGCAGATGGAGGGAGAGAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGAGGGAATAAAATAGTCGTAGGAGGCAGATGGAGGGAGAGAAC  998

seq1  TGGGT  1002
      |||||
seq2  TGGGT  1003