BAC Information

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BAC

Clone NameB6Ng01-154C15
Chromosome4 (Build37)
Map Location 21,955,907 - 22,072,166
singlet/doubletdoublet
Overlap genenone
Upstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik
Downstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154C15.bB6Ng01-154C15.g
ACCDH949284DH949285
length1,174485
definitionDH949284|Mus musculus domesticus DNA, BAC clone: B6Ng01-154C15, 5' end.DH949285|Mus musculus domesticus DNA, BAC clone: B6Ng01-154C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,071,048 - 22,072,166)(21,955,907 - 21,956,397)
sequence
gaattcacttgtctgggtaagactggctattgtcccaagtaaacactcta
cagaccagccccaagctattcctgctctgttctttgtaatgcctaattag
tttcacaggctctactagaagtaaatttgaatgttactgaatagataacc
ttcttactgaattcctactgaattccaagcttgtcagcttcaagcatttt
ctaggacattggaacactggtggaggcttacctatgtcagaattcaatct
ttaaaggcacttataataataatactaaaagagagcacgtggatccatac
accagactaacgcagggatagggtatgaatatactggttatgagaatgcc
tggttccaggaagttgaatttccttgaaactccctgccccgtgagtgctt
ccaggcccctcggcctgccaagcagacttcactggagtgtgcatagcact
ataggatgcagaagacttgccaataaatataactctatccatgctcactg
agatcaatgaaaacacaagcaaacacagaatcctgttccagaacaaaagt
cagcaggaaaacaaagctgtcaattccccatattcattgtttccatatta
atacattaacatcattattaagctcttacaaggatggatggaggactctt
ttgtttcctagttactgatattttgtttagaattttaaaactgactcggc
aggtaaaagtgcttgctaagaaagcttgacaacctgcatttgttcttctc
cctggaacccatataaaagccagatgtgacaatatgtaatctcagtactc
ctcccgagataggaggtaaagaatcgaaagatgcctggagctagctagcc
agtatttcccagcatccaataaggaggactcattgcaaacaagatggaaa
gcaatgatagctggagactgtcctctgtccttcattatgcaccatgacaa
gtggggtcccatcacacacacacacacgcacacacacacacacacacacg
cacacacacaaacacatacacacgtacagaggagagacagagaccgtgac
gagagacagagaccgacagagcagttattatactgaagaaataaatgaat
atttaaatggtaatgcctccccaaccatgcctggacgcttacatgtttac
aggcttaaaatggaataagtataa
cttcctatatgtgctatgtattagagcacacttgagaaagcacctttaag
catataaacacagacagacagacagacacacaaatacacacacacacaca
cacacacacacacacttttcaaaaatatttcacatacattcactctaagt
agtaatatatgatgtttaaaaaactccaaatttgccatgggctctaattg
gtttagtttcttctgctttaaaaagtaattgtttacttaggacctgtctg
cagactggtgttgttctttgtgttctgtaagctgaggggtctgcaaccct
ataggtggatcaacattatgaactaaccagtaccccggagctcatgtctc
tagctgcatatgtatcagaagatggcctagtcagccatcactggaaagag
aggcccattggacttgcaaactttatatgccccagtacaggggaacacca
ggaccaagaagtgggagtgggtgggtaggggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22071048_22072166
seq2: B6Ng01-154C15.b_104_1222 (reverse)

seq1  TTATCACTTATTCCAATGTTAAAACCTGTAAACATGTAAGCGT-CAAGCA  49
      |||| ||||||||||   || || ||||||||||||||||||| || |||
seq2  TTAT-ACTTATTCCA--TTTTAAGCCTGTAAACATGTAAGCGTCCAGGCA  47

seq1  T-GTTGTGTA-GCATTACCATTTTAAATATTCATTTATTTC-TCTGTATA  96
      | |||| | | ||||||||| |||||||||||||||||||| || |||||
seq2  TGGTTGGGGAGGCATTACCA-TTTAAATATTCATTTATTTCTTCAGTATA  96

seq1  TATACTTGCTCTGTCTGTCTCTGTCTCTCTGTCACTGTCTCTGTCTCT-C  145
       |||  ||||||||| ||||||||||||| ||||| |||||||||||| |
seq2  -ATAACTGCTCTGTCGGTCTCTGTCTCTC-GTCACGGTCTCTGTCTCTCC  144

seq1  TCTGTGCGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTG  195
      ||||| ||||||| ||||| ||||||||||||||||||||||||||||||
seq2  TCTGTACGTGTGTATGTGTTTGTGTGTGTGCGTGTGTGTGTGTGTGTGTG  194

seq1  TGCGTGTGTGTGTGTGTGATGGGACCCCACTTGTCATGGTGCAT-ATGGA  244
      |||||||||||||||||||||||||||||||||||||||||||| ||| |
seq2  TGCGTGTGTGTGTGTGTGATGGGACCCCACTTGTCATGGTGCATAATGAA  244

seq1  GGACAGAGGACAGTCT-CAGCTATCATTGCTTTCCATCTTGTTTGCAATT  293
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  GGACAGAGGACAGTCTCCAGCTATCATTGCTTTCCATCTTGTTTGCAA-T  293

seq1  GAGTCCTCCTTATTGGATGCTGGGAAATACTGGCTAGCTAGCTCCAGGCA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTCCTTATTGGATGCTGGGAAATACTGGCTAGCTAGCTCCAGGCA  343

seq1  TCTTTCGATTCTTTACCTCCTATCTCGGGAGGAGTACTGAGATTACATAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCGATTCTTTACCTCCTATCTCGGGAGGAGTACTGAGATTACATAT  393

seq1  TGTCACATCTGGCTTTTATATGGGTTCCAGGGAGAAGAACAAATGCAGGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATCTGGCTTTTATATGGGTTCCAGGGAGAAGAACAAATGCAGGT  443

seq1  TGTCAAGCTTTCTTAGCAAGCACTTTTACCTGCCGAGTCAGTTTTAAAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGCTTTCTTAGCAAGCACTTTTACCTGCCGAGTCAGTTTTAAAAT  493

seq1  TCTAAACAAAATATCAGTAACTAGGAAACAAAAGAGTCCTCCATCCATCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACAAAATATCAGTAACTAGGAAACAAAAGAGTCCTCCATCCATCC  543

seq1  TTGTAAGAGCTTAATAATGATGTTAATGTATTAATATGGAAACAATGAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGAGCTTAATAATGATGTTAATGTATTAATATGGAAACAATGAAT  593

seq1  ATGGGGAATTGACAGCTTTGTTTTCCTGCTGACTTTTGTTCTGGAACAGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAATTGACAGCTTTGTTTTCCTGCTGACTTTTGTTCTGGAACAGG  643

seq1  ATTCTGTGTTTGCTTGTGTTTTCATTGATCTCAGTGAGCATGGATAGAGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGTTTGCTTGTGTTTTCATTGATCTCAGTGAGCATGGATAGAGT  693

seq1  TATATTTATTGGCAAGTCTTCTGCATCCTATAGTGCTATGCACACTCCAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATTGGCAAGTCTTCTGCATCCTATAGTGCTATGCACACTCCAG  743

seq1  TGAAGTCTGCTTGGCAGGCCGAGGGGCCTGGAAGCACTCACGGGGCAGGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTGCTTGGCAGGCCGAGGGGCCTGGAAGCACTCACGGGGCAGGG  793

seq1  AGTTTCAAGGAAATTCAACTTCCTGGAACCAGGCATTCTCATAACCAGTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAGGAAATTCAACTTCCTGGAACCAGGCATTCTCATAACCAGTA  843

seq1  TATTCATACCCTATCCCTGCGTTAGTCTGGTGTATGGATCCACGTGCTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATACCCTATCCCTGCGTTAGTCTGGTGTATGGATCCACGTGCTCT  893

seq1  CTTTTAGTATTATTATTATAAGTGCCTTTAAAGATTGAATTCTGACATAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTATTATTATTATAAGTGCCTTTAAAGATTGAATTCTGACATAG  943

seq1  GTAAGCCTCCACCAGTGTTCCAATGTCCTAGAAAATGCTTGAAGCTGACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCTCCACCAGTGTTCCAATGTCCTAGAAAATGCTTGAAGCTGACA  993

seq1  AGCTTGGAATTCAGTAGGAATTCAGTAAGAAGGTTATCTATTCAGTAACA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGAATTCAGTAGGAATTCAGTAAGAAGGTTATCTATTCAGTAACA  1043

seq1  TTCAAATTTACTTCTAGTAGAGCCTGTGAAACTAATTAGGCATTACAAAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTACTTCTAGTAGAGCCTGTGAAACTAATTAGGCATTACAAAG  1093

seq1  AACAGAGCAGGAATAGCTTGGGGCTG  1119
      ||||||||||||||||||||||||||
seq2  AACAGAGCAGGAATAGCTTGGGGCTG  1119

seq1: chr4_21955907_21956397
seq2: B6Ng01-154C15.g_66_556

seq1  GAATTCCTTCCTATATGTGCTATGTATTAGAGCACACTTGAGAAAGCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTATATGTGCTATGTATTAGAGCACACTTGAGAAAGCACC  50

seq1  TTTAAGCATATAAACACAGACAGACAGACAGACACACAAATACACACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCATATAAACACAGACAGACAGACAGACACACAAATACACACACA  100

seq1  CACACACACACACACACACACTTTTCAAAAATATTTCACATACATTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACTTTTCAAAAATATTTCACATACATTCACT  150

seq1  CTAAGTAGTAATATATGATGTTTAAAAAACTCCAAATTTGCCATGGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAGTAATATATGATGTTTAAAAAACTCCAAATTTGCCATGGGCTC  200

seq1  TAATTGGTTTAGTTTCTTCTGCTTTAAAAAGTAATTGTTTACTTAGGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGTTTAGTTTCTTCTGCTTTAAAAAGTAATTGTTTACTTAGGACC  250

seq1  TGTCTGCAGACTGGTGTTGTTCTTTGTGTTCTGTAAGCTGAGGGGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAGACTGGTGTTGTTCTTTGTGTTCTGTAAGCTGAGGGGTCTGC  300

seq1  AACCCTATAGGTGGATCAACATTATGAACTAACCAGTACCCCGGAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTATAGGTGGATCAACATTATGAACTAACCAGTACCCCGGAGCTCA  350

seq1  TGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCAGCCATCACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCAGCCATCACTGG  400

seq1  AAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGA  450

seq1  ACACCAGGACCAAGAAGTGGGAGTGGGTGGGTAGGGGAGTG  491
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGGACCAAGAAGTGGGAGTGGGTGGGTAGGGGAGTG  491