BAC Information

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BAC

Clone NameB6Ng01-154H02
Chromosome4 (Build37)
Map Location 28,250,148 - 28,251,142
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040691, Tpm3-rs2, LOC100040842, LOC100040735
Downstream geneLOC230044, LOC665141, LOC100040773, Epha7, LOC100040907, LOC100040811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154H02.bB6Ng01-154H02.g
ACCDH949485DH949486
length9921,183
definitionDH949485|Mus musculus domesticus DNA, BAC clone: B6Ng01-154H02, 5' end.DH949486|Mus musculus domesticus DNA, BAC clone: B6Ng01-154H02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtcccatgtaaagccaagataatttcctagttagtccacaatg
aaaagatggaggcaaaaaaacttagtcttagtaggcatgatttcaagcac
aattaaattacaagtacaattttaaatattaataaacaagtttatttttt
atcttgaactttaaacctaacaaaaggagaaaaagacattaataaaatta
ttttgaagtttgtttcacataattgtattttctcccagctgacacattat
tatttcaaaggcaattcttcataaaggaagaaaagaaccaactcagatat
gtgaccactatctctacaaaatgtatgtcagtacagaccacaaatagtgg
ctatgctaacatatataaaactctttttaaaaactttaaaacgttcatgt
aagtttaggggagttgatctatgtttcacaggtcacattgacttcagatc
ggtgccatcaatcaacagtctgcttttccacctgcctgttttcgccctca
actatgaggaccattgacttggaagttttgaatgtataccaaatgtaaaa
agtgtgtcctcaaatccttaacattaagttctgtccttaatctgtacctg
ttctagtagatttatagtcaactaaagagtgcaaattgtttcaaactacc
ctgccctgcttgcttctgattgatttctgagcctttttatcctagaaggc
tttaaagcaaatagccccaagtagtccagctcaatattttccaaagaagc
ctacactttcttagttccagatggttccgcaagcctggaagagtaagggg
aaaatgttgaaaagcctaaggggattgcaatctcacaggaataccaacag
agtcaagtaagccagacccctgggagctctcagggactaatccaccaacc
aatgagtatagggctggtctcagtagaagagatgaaactaaacctgaaga
gacttgatgcccaggaaaggagtgtgtgtgtgggggttggga
gaattctcgctaccagttgatggccatttttggaaagtttatgaattttt
ttttttaatgaaatgtagccgtgctgaaggaagaatatcactaggggtgg
actttgttctccttcttggttttgtatgtgcttgctaaaatatcagctag
actgctgcttctgcctccgtgctttctctgattattgtcctgtcttcccc
accaaaatgaacactgacactcttgacattttagccaaaactaaaatgct
tctttcttaagttgcttttgttggagtatgtgatggtttggaaaagaaag
gcctccatagactcatatctagagttcttaaaactggggaggattaatat
gtgtgaccttgttagataaggtgtctcatggaggagggctttgaggtctc
ataatcctatacattctcagttagcttgatttcttttttgactcacactt
gtggaccatagttactacaccaatgccatgcctgactacctgttgccatg
ctccctgttatgaaggtcatgaattataatactctgcaactatgagcccc
agattaaatgcttcttttataagtttactaggccatgctgttttgttata
tcaataaaagtaactactagagaattaccaagaagtgagatgtcgctatg
acaatacaaataatgctattttttggaagaatgtggaagactttgcgact
ttgaactagaaaagttttgaaagctgaaagtggggattaatggtccattc
tactaggagtctggaagatattagtgctgagagcagtaggaactatggag
accaagttcaagtttgtttcagagagaaataatatcagcaactgccatag
agaccattcttaaattatttcaaataatgtgaaattttgcaactgtctag
gcatctacctgaggcaaaatcaagaggtttgagctaatttgctggtaatg
aaattttaaatatgaaatatagagaaagatagtatctaaataatggtact
gaaaaatagatacacatgttacaatatgatgaaaacatggagtatgtatc
atgtgcacaaatcactgtagattcaaacctgtacctggggtcaggattag
agggaccttagcctatagaggtgggaatgaccatttacgtatgatttgaa
ctctaatacctcaatacacttaatcccactaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28250148_28251142
seq2: B6Ng01-154H02.b_45_1036 (reverse)

seq1  TCCC-ACCCCCACACACACACCTCCCTTTCCTGGGGCATCAAGTCTCTTC  49
      |||| ||||||||||||||||   |||||||| |||||||||||||||||
seq2  TCCCAACCCCCACACACACAC--TCCTTTCCT-GGGCATCAAGTCTCTTC  47

seq1  AGGTTTAGTTTCATCCTCTTCTACTGAGACCAGCCCTATACTCATTGGTT  99
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGGTTTAGTTTCAT-CTCTTCTACTGAGACCAGCCCTATACTCATTGGTT  96

seq1  GGTGGATTAGTCCCTGGGAGCTCCCAGGGGTCTGGCTTACTTGACTCTGT  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGTGGATTAGTCCCTGAGAGCTCCCAGGGGTCTGGCTTACTTGACTCTGT  146

seq1  TGGTATTCCTGTGAGATTGCAATCCCCTTAGGCTTTTCAACATTTTCCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCCTGTGAGATTGCAATCCCCTTAGGCTTTTCAACATTTTCCCC  196

seq1  TTACTCTTCCAGGCTTGCGGAACCATCTGGAACTAAGAAAGTGTAGGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTTCCAGGCTTGCGGAACCATCTGGAACTAAGAAAGTGTAGGCTT  246

seq1  CTTTGGAAAATATTGAGCTGGACTACTTGGGGCTATTTGCTTTAAAGCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAAATATTGAGCTGGACTACTTGGGGCTATTTGCTTTAAAGCCT  296

seq1  TCTAGGATAAAAAGGCTCAGAAATCAATCAGAAGCAAGCAGGGCAGGGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATAAAAAGGCTCAGAAATCAATCAGAAGCAAGCAGGGCAGGGTA  346

seq1  GTTTGAAACAATTTGCACTCTTTAGTTGACTATAAATCTACTAGAACAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAACAATTTGCACTCTTTAGTTGACTATAAATCTACTAGAACAGG  396

seq1  TACAGATTAAGGACAGAACTTAATGTTAAGGATTTGAGGACACACTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATTAAGGACAGAACTTAATGTTAAGGATTTGAGGACACACTTTTT  446

seq1  ACATTTGGTATACATTCAAAACTTCCAAGTCAATGGTCCTCATAGTTGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGTATACATTCAAAACTTCCAAGTCAATGGTCCTCATAGTTGAG  496

seq1  GGCGAAAACAGGCAGGTGGAAAAGCAGACTGTTGATTGATGGCACCGATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAAAACAGGCAGGTGGAAAAGCAGACTGTTGATTGATGGCACCGATC  546

seq1  TGAAGTCAATGTGACCTGTGAAACATAGATCAACTCCCCTAAACTTACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCAATGTGACCTGTGAAACATAGATCAACTCCCCTAAACTTACAT  596

seq1  GAACGTTTTAAAGTTTTTAAAAAGAGTTTTATATATGTTAGCATAGCCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTTTTAAAGTTTTTAAAAAGAGTTTTATATATGTTAGCATAGCCAC  646

seq1  TATTTGTGGTCTGTACTGACATACATTTTGTAGAGATAGTGGTCACATAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGGTCTGTACTGACATACATTTTGTAGAGATAGTGGTCACATAT  696

seq1  CTGAGTTGGTTCTTTTCTTCCTTTATGAAGAATTGCCTTTGAAATAATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGGTTCTTTTCTTCCTTTATGAAGAATTGCCTTTGAAATAATAA  746

seq1  TGTGTCAGCTGGGAGAAAATACAATTATGTGAAACAAACTTCAAAATAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGCTGGGAGAAAATACAATTATGTGAAACAAACTTCAAAATAAT  796

seq1  TTTATTAATGTCTTTTTCTCCTTTTGTTAGGTTTAAAGTTCAAGATAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAATGTCTTTTTCTCCTTTTGTTAGGTTTAAAGTTCAAGATAAAA  846

seq1  AATAAACTTGTTTATTAATATTTAAAATTGTACTTGTAATTTAATTGTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTTGTTTATTAATATTTAAAATTGTACTTGTAATTTAATTGTGC  896

seq1  TTGAAATCATGCCTACTAAGACTAAGTTTTTTTGCCTCCATCTTTTCATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCATGCCTACTAAGACTAAGTTTTTTTGCCTCCATCTTTTCATT  946

seq1  GTGGACTAACTAGGAAATTATCTTGGCTTTACATGGGACTGAATTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTAACTAGGAAATTATCTTGGCTTTACATGGGACTGAATTC  992