BAC Information

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BAC

Clone NameB6Ng01-154J23
Chromosome4 (Build37)
Map Location 119,833,411 - 119,945,692
singlet/doubletdoublet
Overlap geneEdn2, Foxo6
Upstream geneZfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3
Downstream geneScmh1, Slfnl1, Ctps, EG667063, Cited4, Kcnq4, Nfyc, Rims3, LOC626489, 3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154J23.bB6Ng01-154J23.g
ACCDH949619DH949620
length1,103149
definitionDH949619|Mus musculus domesticus DNA, BAC clone: B6Ng01-154J23, 5' end.DH949620|Mus musculus domesticus DNA, BAC clone: B6Ng01-154J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,833,411 - 119,834,526)(119,945,544 - 119,945,692)
sequence
gaattcctactacaggctgggagcttgagaggggagcagaattccttggg
taaaatggggatgaggcagcctcaggtggtcaaaggtcaggcatgagttg
tgccattcctgaggccagtggtcctaaagggggctctgacgcgcccaagg
ccatgtaaccttgagtgggcctttcacctcccacgcatcgaagggatatc
tcagcttgcttcaccgtgggcagggaggagggtggcagataccctgtaaa
gagcgaaagctttgcttttagatgagacctccactccaaacttccagttc
aggagtgctagtcagagagtagggaggggccgggtaccacaacttgggac
taacttcagaactcagaggggccttgggcctgcagggagcctgcagagtc
ctgaaggtgttgcagagaagcgcagagggtggagcccagccttccacctc
cctctccccctcaccgggaggccagggcgggccaggcacccagggaggag
gcggtgtccctggctctctgcccaaggtgcagcagctaagcaggcggggc
tgcaccagtaggggcgggcgggcgccctgcctggtattataagaggcggc
cagggcacctcagcaatgagctctcagctcggcttagcaggaggacactg
gcgacctgctctcccggctcccttggcccagccaagcactctgccgctgc
tgctatggtctccgcctggtgttccatcgctctggccctgcttttggccc
tgcatgaaggtgagctgccctctctcgcgtgtttgcgatcccagggtcta
ttcattgatgtctcctccgggggcatggtgcttccttcccaaaaccaact
gggggcatagagcggtgaggccacagtaggagctaccactgcagcgtgca
gcacagcgatggtagctggggcttccccaggctagccagtggttcctgaa
caccaaggtgccaacttccttattgtgcagaggagagccctgcgggtccc
taacccagacagccagtgtcctgacttctcttcacctctttctctcttct
gtgtgcaggaaggccaggcagctgcaccttgagcagcggcctcggtacca
agg
tgtgatcatctagagggaaagacatctggcctggcaggttggagacaaag
gagagagtgtggaggggaacacctgagagagaggtcatagagagtgtatg
ggctgtgactgggcctttgttcatctaggtgtgtgggggggtgtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119833411_119834526
seq2: B6Ng01-154J23.b_48_1150

seq1  GAATTCCTACTACAGGCTGGGAGCTTGAGAGGGGAGCAGAATTCCTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTACAGGCTGGGAGCTTGAGAGGGGAGCAGAATTCCTTGGG  50

seq1  TAAAATGGGGATGAGGCAGCCTCAGGTGGTCAAAGGTCAGGCATGAGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGGGATGAGGCAGCCTCAGGTGGTCAAAGGTCAGGCATGAGTTG  100

seq1  TGCCATTCCTGAGGCCAGTGGTCCTAAAGGGGGCTCTGACGCGCCCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCCTGAGGCCAGTGGTCCTAAAGGGGGCTCTGACGCGCCCAAGG  150

seq1  CCATGTAACCTTGAGTGGGCCTTTCACCTCCCACGCATCGAAGGGATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAACCTTGAGTGGGCCTTTCACCTCCCACGCATCGAAGGGATATC  200

seq1  TCAGCTTGCTTCACCGTGGGCAGGGAGGAGGGTGGCAGATACCCTGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTGCTTCACCGTGGGCAGGGAGGAGGGTGGCAGATACCCTGTAAA  250

seq1  GAGCGAAAGCTTTGCTTTTAGATGAGACCTCCACTCCAAACTTCCAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGAAAGCTTTGCTTTTAGATGAGACCTCCACTCCAAACTTCCAGTTC  300

seq1  AGGAGTGCTAGTCAGAGAGTAGGGAGGGGCCGGGTACCACAACTTGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGCTAGTCAGAGAGTAGGGAGGGGCCGGGTACCACAACTTGGGAC  350

seq1  TAACTTCAGAACTCAGAGGGGCCTTGGGCCTGCAGGGAGCCTGCAGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAGAACTCAGAGGGGCCTTGGGCCTGCAGGGAGCCTGCAGAGTC  400

seq1  CTGAAGGTGTTGCAGAGAAGCGCAGAGGGTGGAGCCCAGCCTTCCACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTGTTGCAGAGAAGCGCAGAGGGTGGAGCCCAGCCTTCCACCTC  450

seq1  CCTCTCCCCCTCACCGGGAGGCCAGGGCGGGCCAGGCACCCAGGGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCCTCACCGGGAGGCCAGGGCGGGCCAGGCACCCAGGGAGGAG  500

seq1  GCGGTGTCCCTGGCTCTCTGCCCAAGGTGCAGCAGCTAAGCAGGCGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGTCCCTGGCTCTCTGCCCAAGGTGCAGCAGCTAAGCAGGCGGGGC  550

seq1  TGCACCAGTAGGGGCGGGCGGGCGCCCTGCCTGGTATTATAAGAGGCGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAGTAGGGGCGGGCGGGCGCCCTGCCTGGTATTATAAGAGGCGGC  600

seq1  CAGGGCACCTCAGCAATGAGCTCTCAGCTCGGCTTAGCAGGAGGACACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCACCTCAGCAATGAGCTCTCAGCTCGGCTTAGCAGGAGGACACTG  650

seq1  GCGACCTGCTCTCCCGGCTCCCTTGGCCCAGCCAAGCACTCTGCCGCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACCTGCTCTCCCGGCTCCCTTGGCCCAGCCAAGCACTCTGCCGCTGC  700

seq1  TGCTATGGTCTCCGCCTGGTGTTCCATCGCTCTGGCCCTGCTTTTGGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGGTCTCCGCCTGGTGTTCCATCGCTCTGGCCCTGCTTTTGGCCC  750

seq1  TGCATGAAGGTGAGCTGCCCTCTCTCGCGTG-TTGCGATCCCAGGGTCTA  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCATGAAGGTGAGCTGCCCTCTCTCGCGTGTTTGCGATCCCAGGGTCTA  800

seq1  TTCATTGATGTCTCCTCCGGGGGCATGGTGCTTCCTTCCCAAAACCAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGATGTCTCCTCCGGGGGCATGGTGCTTCCTTCCCAAAACCAACT  850

seq1  GGGGGCATAGAGCGGTGAGGCCACAGTAGGAGCTACCACTGCAGCGTGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCATAGAGCGGTGAGGCCACAGTAGGAGCTACCACTGCAGCGTGCA  900

seq1  GGCACAGCGATGGTAGCTGGGGCTTCCCCAGGCTAGCCAGTGGTTCCTGA  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GCACAGCGATGGTAGCTGGGGCTTCCCCAGGCTAGCCAGTGGTTCCTGA  949

seq1  ACACCAAGGGTGCCAACTTCCTTATTGTGCAAGAGGAGGAGCCCTGCGGG  999
      ||||||| |||||||||||||||||||||| |||||| ||||||||||||
seq2  ACACCAA-GGTGCCAACTTCCTTATTGTGC-AGAGGA-GAGCCCTGCGGG  996

seq1  TCCCCTAACCCAGACAGGCCAGGTGTCCTGACCTCCTCTCCACCTCTCTC  1049
      | |||||||||||||| |||| ||||||||| || |||| ||||||| ||
seq2  T-CCCTAACCCAGACA-GCCA-GTGTCCTGA-CTTCTCTTCACCTCTTTC  1042

seq1  TCTCTCCTGTGTGCAGGGAAGGGCCAGGCAGCTGCCACCCTGGAGCAGCC  1099
      ||||| |||||||||||  | ||||||||||||||   ||| |||||| |
seq2  TCTCTTCTGTGTGCAGG--AAGGCCAGGCAGCTGC--ACCTTGAGCAG-C  1087

seq1  GGCCTCGGCACCCAAGG  1116
      |||||||| | ||||||
seq2  GGCCTCGGTA-CCAAGG  1103

seq1: chr4_119945544_119945692
seq2: B6Ng01-154J23.g_71_219 (reverse)

seq1  CCCCCACACCCCCCCACACACCTAGATGAACAAAGGCCCAGTCACAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACACCCCCCCACACACCTAGATGAACAAAGGCCCAGTCACAGCCC  50

seq1  ATACACTCTCTATGACCTCTCTCTCAGGTGTTCCCCTCCACACTCTCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTCTCTATGACCTCTCTCTCAGGTGTTCCCCTCCACACTCTCTCC  100

seq1  TTTGTCTCCAACCTGCCAGGCCAGATGTCTTTCCCTCTAGATGATCACA  149
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCCAACCTGCCAGGCCAGATGTCTTTCCCTCTAGATGATCACA  149