BAC Information

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BAC

Clone NameB6Ng01-155H21
Chromosome4 (Build37)
Map Location 63,230,271 - 63,346,924
singlet/doubletdoublet
Overlap gene6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451
Upstream geneRgs3, Zfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1
Downstream geneTnfsf15, Tnfsf8, Rpl17-ps, Tnc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155H21.bB6Ng01-155H21.g
ACCDH950259DH950260
length9071,158
definitionDH950259|Mus musculus domesticus DNA, BAC clone: B6Ng01-155H21, 5' end.DH950260|Mus musculus domesticus DNA, BAC clone: B6Ng01-155H21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,346,014 - 63,346,924)(63,230,271 - 63,231,432)
sequence
gaattcacacatcgatctctgcccttgaagataagtccaaagggtttcaa
agcaaatccccttcatgcacaagtgaactacatcaattggaacaaagttt
acttaagacatctgacagtcccattttgccatattaattaaagtcagaga
gatgggaaatgtggtgggtctttacaatagggacagagtgctccttttga
ttttttttttaatatctggtctcttcaaacggaaatcataggaaagaata
catcccacatggcagacggtaagctctgtcctcaggaaaaaacatggggt
gagggggatgtaaagtcatctgtgtgtttgttcaacctgagttaatatat
tacaatgttcacagacactgagacatcagggccacaaatatatacaaatc
tgttttccatagcaacaaagagagggaggaagggaaaaaagaagggagga
tcttgagttggtcaccagacgtagctttctagataatggggcatctagta
gactcggtcagctttgcagggttattgtaagagtctaattgactccatga
gaacaccatgttcgtgtcatttactcccctcccctctgtgatgggtcaca
gaatcattcatcctcgacaggagcctggatgttggcctgcttcaatgatc
tactctgttagcaggcactcaacaacaccagtagctaatactgagtattt
acagtagtgctctttgaagaggttttgcacgggttaacggtcataagaac
cctgtgaggaaggctctcctcactgtccccagttgcaagtgaaatacttg
aggctgaggaacttaagtatccattcaaggtcacactcatgaatatttga
actcaagcccactcaactgcacatcccccatcttttttctgttaagaaga
ttatatt
gaattctttccagagcgtcctgccgcttttgtgtttcatttgaaattggg
gtgaggagggcttaggagtgactgacctcgctatcaaacttgagggctca
caacttttaccccggctccggctcagccagccatcttcaataggccgact
aaaagaaccagttaagaatggaatgcagaaaagggagatttagtcaatgt
ggcctcactggaaagagcgacacagagactcagcaaacactccagaggtc
ctgaagggagagcagagtttaagcacacagacacggccaagcacatctaa
gcagccaggtcaagatgtggccccgcccaccattttcccaccatcctctg
ggctccagtctcatcctggatggtagcctaacaagtcattagagctgtgg
gacatttcccatcatgagattcctagcagagttcccatttcttgggagtc
cgtagtttcagcagcctgagagacacgagtgtctctttagaatatcctca
tttctgccaggccagttacaacctgttgtcaagattcacccaataagtat
tgaataggagccatcccaggatcagcatggtttcctccaggcccctggga
ggctgtttgacccccagggtggcagggatatctgacagggtgcccctgag
tggagctgctgttcctggcagctccatgccttctacagctctccttgtct
tctacaggtgttctacgtgttggtgtgggccaacatctactccaccagcc
aaatgtttgccctgggcaaccagtgggcaggcgtgctgcttgcgaccctg
gctgctttcagcctgactctgacccttgtgctggtctttgagaggcagca
gaggaaagtgaggtgtccggggccctgtctgtcctctccttagggctggg
tggtctgatactttctttgttctaactcagcagctccttcaacctcccct
tcatggctgcagatccataactaagagaatgtgaagctgattcctttgtt
tgtacagtttttgcttcttttacacacactaacacacatatacacacaca
tcccaccacccacacatctttcataaaggcaagcttactggctgggcccc
aagctcatcctcccctcctctgccttcttcttctccctggtttcctggaa
aggtcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_63346014_63346924
seq2: B6Ng01-155H21.b_43_949 (reverse)

seq1  AATATAATCTCATAAACAGAAAAAAAGAATGGGGTATGTGCAGTTGAGTG  50
      ||||||||||  | |||||||||||   |||||| |||||||||||||||
seq2  AATATAATCTTCTTAACAGAAAAAA--GATGGGGGATGTGCAGTTGAGTG  48

seq1  GGCTTGAGTTCAAATATTCATGAGTGTGACCTTGAATGGATTACTTAAGT  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGCTTGAGTTCAAATATTCATGAGTGTGACCTTGAATGGA-TACTTAAGT  97

seq1  TCCTCAGCCTCAAGTTATTTCACTTGCAAACTGGGGACAGTGAGGAGAGC  150
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  TCCTCAGCCTCAAG-TATTTCACTTGC-AACTGGGGACAGTGAGGAGAGC  145

seq1  CTTCCTCACAGGGTTCTTATGACCGTTAACCCGTGC-AAACCTCTTCAAA  199
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTCCTCACAGGGTTCTTATGACCGTTAACCCGTGCAAAACCTCTTCAAA  195

seq1  GAGCACTACTGTAAATACTCAGTATTAGCTACTGGTGTTGTTGAGTGCCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTACTGTAAATACTCAGTATTAGCTACTGGTGTTGTTGAGTGCCT  245

seq1  GCTAACAGAGTAGATCATTGAAGCAGGCCAACATCCAGGCTCCTGTCGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGAGTAGATCATTGAAGCAGGCCAACATCCAGGCTCCTGTCGAG  295

seq1  GATGAATGATTCTGTGACCCATCACAGAGGGGAGGGGAGTAAATGACACG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATGATTCTGTGACCCATCACAGAGGGGAGGGGAGTAAATGACACG  345

seq1  AACATGGTGTTCTCATGGAGTCAATTAGACTCTTACAATAACCCTGCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTGTTCTCATGGAGTCAATTAGACTCTTACAATAACCCTGCAAA  395

seq1  GCTGACCGAGTCTACTAGATGCCCCATTATCTAGAAAGCTACGTCTGGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCGAGTCTACTAGATGCCCCATTATCTAGAAAGCTACGTCTGGTG  445

seq1  ACCAACTCAAGATCCTCCCTTCTTTTTTCCCTTCCTCCCTCTCTTTGTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTCAAGATCCTCCCTTCTTTTTTCCCTTCCTCCCTCTCTTTGTTG  495

seq1  CTATGGAAAACAGATTTGTATATATTTGTGGCCCTGATGTCTCAGTGTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGAAAACAGATTTGTATATATTTGTGGCCCTGATGTCTCAGTGTCT  545

seq1  GTGAACATTGTAATATATTAACTCAGGTTGAACAAACACACAGATGACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACATTGTAATATATTAACTCAGGTTGAACAAACACACAGATGACTT  595

seq1  TACATCCCCCTCACCCCATGTTTTTTCCTGAGGACAGAGCTTACCGTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCCCCTCACCCCATGTTTTTTCCTGAGGACAGAGCTTACCGTCTG  645

seq1  CCATGTGGGATGTATTCTTTCCTATGATTTCCGTTTGAAGAGACCAGATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGGATGTATTCTTTCCTATGATTTCCGTTTGAAGAGACCAGATA  695

seq1  TTAAAAAAAAAATCAAAAGGAGCACTCTGTCCCTATTGTAAAGACCCACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAATCAAAAGGAGCACTCTGTCCCTATTGTAAAGACCCACC  745

seq1  ACATTTCCCATCTCTCTGACTTTAATTAATATGGCAAAATGGGACTGTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCCATCTCTCTGACTTTAATTAATATGGCAAAATGGGACTGTCA  795

seq1  GATGTCTTAAGTAAACTTTGTTCCAATTGATGTAGTTCACTTGTGCATGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTAAGTAAACTTTGTTCCAATTGATGTAGTTCACTTGTGCATGA  845

seq1  AGGGGATTTGCTTTGAAACCCTTTGGACTTATCTTCAAGGGCAGAGATCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTTGCTTTGAAACCCTTTGGACTTATCTTCAAGGGCAGAGATCG  895

seq1  ATGTGTGAATTC  911
      ||||||||||||
seq2  ATGTGTGAATTC  907

seq1: chr4_63230271_63231432
seq2: B6Ng01-155H21.g_65_1222

seq1  GAATTCTTTCCAGAGCGTCCTGCCGCTTTTGTGTTTCATTTGAAATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGAGCGTCCTGCCGCTTTTGTGTTTCATTTGAAATTGGG  50

seq1  GTGAGGAGGGCTTAGGAGTGACTGACCTCGCTATCAAACTTGAGGGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGGGCTTAGGAGTGACTGACCTCGCTATCAAACTTGAGGGCTCA  100

seq1  CAACTTTTACCCCGGCTCCGGCTCAGCCAGCCATCTTCAATAGGCCGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTACCCCGGCTCCGGCTCAGCCAGCCATCTTCAATAGGCCGACT  150

seq1  AAAAGAACCAGTTAAGAATGGAATGCAGAAAAGGGAGATTTAGTCAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACCAGTTAAGAATGGAATGCAGAAAAGGGAGATTTAGTCAATGT  200

seq1  GGCCTCACTGGAAAGAGCGACACAGAGACTCAGCAAACACTCCAGAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCACTGGAAAGAGCGACACAGAGACTCAGCAAACACTCCAGAGGTC  250

seq1  CTGAAGGGAGAGCAGAGTTTAAGCACACAGACACGGCCAAGCACATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGAGAGCAGAGTTTAAGCACACAGACACGGCCAAGCACATCTAA  300

seq1  GCAGCCAGGTCAAGATGTGGCCCCGCCCACCATTTTCCCACCATCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGGTCAAGATGTGGCCCCGCCCACCATTTTCCCACCATCCTCTG  350

seq1  GGCTCCAGTCTCATCCTGGATGGTAGCCTAACAAGTCATTAGAGCTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGTCTCATCCTGGATGGTAGCCTAACAAGTCATTAGAGCTGTGG  400

seq1  GACATTTCCCATCATGAGATTCCTAGCAGAGTTCCCATTTCTTGGGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCCCATCATGAGATTCCTAGCAGAGTTCCCATTTCTTGGGAGTC  450

seq1  CGTAGTTTCAGCAGCCTGAGAGACACGAGTGTCTCTTTAGAATATCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTTTCAGCAGCCTGAGAGACACGAGTGTCTCTTTAGAATATCCTCA  500

seq1  TTTCTGCCAGGCCAGTTACAACCTGTTGTCAAGATTCACCCAATAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCAGGCCAGTTACAACCTGTTGTCAAGATTCACCCAATAAGTAT  550

seq1  TGAATAGGAGCCATCCCAGGATCAGCATGGTTTCCTCCAGGCCCCTGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGAGCCATCCCAGGATCAGCATGGTTTCCTCCAGGCCCCTGGGA  600

seq1  GGCTGTTTGACCCCCAGGGTGGCAGGGATATCTGACAGGGTGCCCCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTTGACCCCCAGGGTGGCAGGGATATCTGACAGGGTGCCCCTGAG  650

seq1  TGGAGCTGCTGTTCCTGGCAGCTCCATGCCTTCTACAGCTCTCCTTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTGCTGTTCCTGGCAGCTCCATGCCTTCTACAGCTCTCCTTGTCT  700

seq1  TCTACAGGTGTTCTACGTGTTGGTGTGGGCCAACATCTACTCCACCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGGTGTTCTACGTGTTGGTGTGGGCCAACATCTACTCCACCAGCC  750

seq1  AAATGTTTGCCCTGGGCAACCAGTGGGCAGGCGTGCTGCTTGCGACCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTGCCCTGGGCAACCAGTGGGCAGGCGTGCTGCTTGCGACCCTG  800

seq1  GCTGCTTTCAGCCTGACCCTGACCCTTGTGCTGGTCTTTGAGAGGCAGCA  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCTGCTTTCAGCCTGACTCTGACCCTTGTGCTGGTCTTTGAGAGGCAGCA  850

seq1  GAGGAAGGTGAGGTGTCCGGGGCCCTGTCTGTCCCCTCCTTAGGGCTGGG  900
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGGAAAGTGAGGTGTCCGGGGCCCTGTCTGTCCTCTCCTTAGGGCTGGG  900

seq1  TGGTCTGATACTTTCTTTGTTCTAACTCAGCAGCTCCTTCAA-CTCCCC-  948
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TGGTCTGATACTTTCTTTGTTCTAACTCAGCAGCTCCTTCAACCTCCCCT  950

seq1  TCATGGCTGCAGATCCATAACTAAGAGAAATGTGAAGCTGAATCCTTTG-  997
      ||||||||||||||||||||||||||| ||||||||||||| ||||||| 
seq2  TCATGGCTGCAGATCCATAACTAAGAG-AATGTGAAGCTGATTCCTTTGT  999

seq1  TTGTACAGTTTTTGC-TCTTTTACACACACACACACACACACACACACAC  1046
      ||||||||||||||| ||||||||||||||  ||||||| | ||||||||
seq2  TTGTACAGTTTTTGCTTCTTTTACACACACTAACACACATATACACACAC  1049

seq1  ATACACACACACACACATCCTTTCCATAAATGCAAAGCTTACTGGCTCGT  1096
      || |   ||| ||||||||  || |||||| || |||||||||||||   
seq2  ATCCCACCACCCACACATC--TTTCATAAAGGC-AAGCTTACTGGCT--G  1094

seq1  GCCCCCATGCTCTTTCTCCCCTCCTCTGCCTTCTTCTTTCCTCCCCTGTT  1146
      | ||||| |||| | |||||||||||||||||||||||  |||||  |||
seq2  GGCCCCAAGCTCATCCTCCCCTCCTCTGCCTTCTTCTT--CTCCCTGGTT  1142

seq1  GCCCTGAAAGGTCACT  1162
       ||  |||||||||||
seq2  TCCTGGAAAGGTCACT  1158