BAC Information

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BAC

Clone NameB6Ng01-156F13
Chromosome4 (Build37)
Map Location 86,881,393 - 87,030,653
singlet/doubletdoublet
Overlap genenone
Upstream geneAdamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
Downstream geneMllt3, BC057079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156F13.bB6Ng01-156F13.g
ACCDH950874DH950875
length1,1381,022
definitionDH950874|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F13, 5' end.DH950875|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,029,494 - 87,030,653)(86,881,393 - 86,882,412)
sequence
gaattcaggccagatcagagagctctctcttcgagctgaataaacttctg
actttagtaattgaactcttcagatgggcaactataggaatgaggggaac
tcaaggccccttcaatcactgagtgctcgtagttgaaattatgaaactct
ggtcacccatggctgaataaagagctggggtttaatgagtttaccaggtt
aaaatgagccagtgtaaggcagggatcagacttagtaattaggactccac
ttaaaccactgagcattttccttaacaacagagctggaggtggggttaga
aatggcataaatgcccttgctcttagccaatcatgaaccactgagtagag
gctgacagtgggaggcaggtagggagcaactctacctggtttcaccattg
accataaaacaggaatgccccaaattctagctgctttactttgaatctgg
tcgatactcaaatgacctgaggacatttctagaacatagatggctcctat
aatcgtgtgctatttccaaagtcaaaggtggtacggtataggaacttggc
agtctctctcaagaaagatgggcttttttcagtacgcaaggccctggagg
gtgaatagattaaaatcagtctattcctacaataatggaggaggatggag
gagccctattgtcaccactagcaattgaagactggagacattggctttag
agagatcttgtctctgtttcttgctgtgaaagtcttgagtgcccatttct
ttttcttctaaaataaggataataatttctaactgagacattcataccag
ggattccacgtgatggtttatgcaaaagtatttgctacctgttatttact
tctgcagagtaggtgacacggagttctgctctcaacctcaaaggggacac
taagcaagggggacatcatccttttcaattctagttatagctgtgtgtgt
caatgatatagaaacagagaaagtatatagctgcaaatgttttgtggagt
tggttggtgggtagacgcagcactgggtaatctccttctaaagagaagtc
attcccacagattgcaccgctgtgctgatatctggtcatctcttgtgtct
ctctcttcctctactggctttcgaaggacatctcagac
gaattccaggtcaggatctgagcgtaaaatcaaagtcacagtactaaggc
agggtcacaggccttagcctcaaacaagccatcaagagtgcggctctgcc
tatggctcttggttgctgaattcaaatatttgtgttgttcatctcatagc
gttggactgagtaccactaaccatttcccagggtcggaggtgtcaagttg
tataggtggagtacagcacctgcttctgaaaccactgctgacgtgtgatg
gagcttgtgtgggtgaagctttccacaccattccatgttgacaggcctct
gccccacctctggggtcagtcgaagaggctgggtggctgggtttgttcac
cttctccgtggtggcttccttggcagtaatgacagtttctctcctacctg
ctgctcctctgtttatccctcagttgactgggaatcaaaaatgctaaggc
aggtgacaaagaacctcacaagtgctacagataggaagacaaggacttcc
ctgagaaacgtccattcttccccctgccccctgcctccggttttccagac
ccactgtcatatttactgtatttctttgcttattggaatgcagcccagca
tgtcttctaagggaggtaggatgaaaaatgtttgtctctacaagccttgc
acagctaactgtaaattttgggggttagaatgggcctttcctagaaatgt
tgaggtggtttttcttgtttgtttttgttttttgttttttggaaacaggg
ccttcctaaaaagtccagactgacaataagtttgtgttttacctcccctt
agcatcttgtggatgtcagtacacatgctgctggaatgagcacacaagct
ttataacggtgttttttcactgctattggacgtctcattgttgctgtaga
aaaagttggtgaaatgtgggactcctagtgatttctgatggaactgcttt
atttaaaatttttatattcacagtgctctaaaatttcatgataattatgt
cttggagtgtagtggaggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_87029494_87030653
seq2: B6Ng01-156F13.b_48_1185 (reverse)

seq1  GTCTGAGATGTTCTATTACGAAAGCAAGTAGAGGGAAAGAAGAAGAGACA  50
      ||||||||||| |   | ||||||| |||||||| | ||    |||||| 
seq2  GTCTGAGATGTCC---TTCGAAAGCCAGTAGAGGAAGAG----AGAGAC-  42

seq1  ACAAGAGATGGACACAAGATA-CAGCACAGCGGTGCAATCTGTGGGAATG  99
      ||||||||||   || ||||| ||||||||||||||||||||||||||| 
seq2  ACAAGAGATG---ACCAGATATCAGCACAGCGGTGCAATCTGTGGGAAT-  88

seq1  GACTTCTCTTTTAGAAGGAGAATTACCCAGTGCCTGCGTCTACCCACCAA  149
      |||||||| ||||||||||| ||||||||||| |||||||||||||||||
seq2  GACTTCTC-TTTAGAAGGAG-ATTACCCAGTG-CTGCGTCTACCCACCAA  135

seq1  ACCAAACTCCACAAAACATTTTGCAGCTATATTACTTTTCTTCTTGTTTC  199
        | |||||||||||||| |||||||||||| ||| |||||   ||||||
seq2  --CCAACTCCACAAAACA-TTTGCAGCTATA-TAC-TTTCT--CTGTTTC  178

seq1  TATATTCATTGACACACACAGCTATAACTAGAATTGAAAAGGATGATGTC  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATA-TCATTGACACACACAGCTATAACTAGAATTGAAAAGGATGATGTC  227

seq1  CCCCTTGCTTAGTGTCCCCTTTGAGGTTGAGAGCAGAACTCCGTGTCACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGCTTAGTGTCCCCTTTGAGGTTGAGAGCAGAACTCCGTGTCACC  277

seq1  TACTCTGCAGAAGTAAATAACAGGTAGCAAATACTTTTGCATAAACCATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCAGAAGTAAATAACAGGTAGCAAATACTTTTGCATAAACCATC  327

seq1  ACGTGGAATCCCTGGTATGAATGTCTCAGTTAGAAATTATTATCCTTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGAATCCCTGGTATGAATGTCTCAGTTAGAAATTATTATCCTTATT  377

seq1  TTAGAAGAAAAAGAAATGGGCACTCAAGACTTTCACAGCAAGAAACAGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGAAAAAGAAATGGGCACTCAAGACTTTCACAGCAAGAAACAGAG  427

seq1  ACAAGATCTCTCTAAAGCCAATGTCTCCAGTCTTCAATTGCTAGTGGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCTCTCTAAAGCCAATGTCTCCAGTCTTCAATTGCTAGTGGTGA  477

seq1  CAATAGGGCTCCTCCATCCTCCTCCATTATTGTAGGAATAGACTGATTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGGCTCCTCCATCCTCCTCCATTATTGTAGGAATAGACTGATTTT  527

seq1  AATCTATTCACCCTCCAGGGCCTTGCGTACTGAAAAAAGCCCATCTTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTCACCCTCCAGGGCCTTGCGTACTGAAAAAAGCCCATCTTTCT  577

seq1  TGAGAGAGACTGCCAAGTTCCTATACCGTACCACCTTTGACTTTGGAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGACTGCCAAGTTCCTATACCGTACCACCTTTGACTTTGGAAAT  627

seq1  AGCACACGATTATAGGAGCCATCTATGTTCTAGAAATGTCCTCAGGTCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACGATTATAGGAGCCATCTATGTTCTAGAAATGTCCTCAGGTCAT  677

seq1  TTGAGTATCGACCAGATTCAAAGTAAAGCAGCTAGAATTTGGGGCATTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATCGACCAGATTCAAAGTAAAGCAGCTAGAATTTGGGGCATTCC  727

seq1  TGTTTTATGGTCAATGGTGAAACCAGGTAGAGTTGCTCCCTACCTGCCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGGTCAATGGTGAAACCAGGTAGAGTTGCTCCCTACCTGCCTC  777

seq1  CCACTGTCAGCCTCTACTCAGTGGTTCATGATTGGCTAAGAGCAAGGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCAGCCTCTACTCAGTGGTTCATGATTGGCTAAGAGCAAGGGCA  827

seq1  TTTATGCCATTTCTAACCCCACCTCCAGCTCTGTTGTTAAGGAAAATGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCCATTTCTAACCCCACCTCCAGCTCTGTTGTTAAGGAAAATGCT  877

seq1  CAGTGGTTTAAGTGGAGTCCTAATTACTAAGTCTGATCCCTGCCTTACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTTAAGTGGAGTCCTAATTACTAAGTCTGATCCCTGCCTTACAC  927

seq1  TGGCTCATTTTAACCTGGTAAACTCATTAAACCCCAGCTCTTTATTCAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCATTTTAACCTGGTAAACTCATTAAACCCCAGCTCTTTATTCAGC  977

seq1  CATGGGTGACCAGAGTTTCATAATTTCAACTACGAGCACTCAGTGATTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTGACCAGAGTTTCATAATTTCAACTACGAGCACTCAGTGATTGA  1027

seq1  AGGGGCCTTGAGTTCCCCTCATTCCTATAGTTGCCCATCTGAAGAGTTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCTTGAGTTCCCCTCATTCCTATAGTTGCCCATCTGAAGAGTTCA  1077

seq1  ATTACTAAAGTCAGAAGTTTATTCAGCTCGAAGAGAGAGCTCTCTGATCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAAGTCAGAAGTTTATTCAGCTCGAAGAGAGAGCTCTCTGATCT  1127

seq1  GGCCTGAATTC  1160
      |||||||||||
seq2  GGCCTGAATTC  1138

seq1: chr4_86881393_86882412
seq2: B6Ng01-156F13.g_67_1088

seq1  GAATTCCAGGTCAGGATCTGAGCGTAAAATCAAAGTCACAGTACTAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGGATCTGAGCGTAAAATCAAAGTCACAGTACTAAGGC  50

seq1  AGGGTCACAGGCCTTAGCCTCAAACAAGCCATCAAGAGTGCGGCTCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCACAGGCCTTAGCCTCAAACAAGCCATCAAGAGTGCGGCTCTGCC  100

seq1  TATGGCTCTTGGTTGCTGAATTCAAATATTTGTGTTGTTCATCTCATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTCTTGGTTGCTGAATTCAAATATTTGTGTTGTTCATCTCATAGC  150

seq1  GTTGGACTGAGTACCACTAACCATTTCCCAGGGTCGGAGGTGTCAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACTGAGTACCACTAACCATTTCCCAGGGTCGGAGGTGTCAAGTTG  200

seq1  TATAGGTGGAGTACAGCACCTGCTTCTGAAACCACTGCTGACGTGTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGGAGTACAGCACCTGCTTCTGAAACCACTGCTGACGTGTGATG  250

seq1  GAGCTTGTGTGGGTGAAGCTTTCCACACCATTCCATGTTGACAGGCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGTGTGGGTGAAGCTTTCCACACCATTCCATGTTGACAGGCCTCT  300

seq1  GCCCCACCTCTGGGGTCAGTCGAAGAGGCTGGGTGGCTGGGTTTGTTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACCTCTGGGGTCAGTCGAAGAGGCTGGGTGGCTGGGTTTGTTCAC  350

seq1  CTTCTCCGTGGTGGCTTCCTTGGCAGTAATGACAGTTTCTCTCCTACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCGTGGTGGCTTCCTTGGCAGTAATGACAGTTTCTCTCCTACCTG  400

seq1  CTGCTCCTCTGTTTATCCCTCAGTTGACTGGGAATCAAAAATGCTAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCTGTTTATCCCTCAGTTGACTGGGAATCAAAAATGCTAAGGC  450

seq1  AGGTGACAAAGAACCTCACAAGTGCTACAGATAGGAAGACAAGGACTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACAAAGAACCTCACAAGTGCTACAGATAGGAAGACAAGGACTTCC  500

seq1  CTGAGAAACGTCCATTCTTCCCCCTGCCCCCTGCCTCCGGTTTTCCAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAACGTCCATTCTTCCCCCTGCCCCCTGCCTCCGGTTTTCCAGAC  550

seq1  CCACTGTCATATTTACTGTATTTCTTTGCTTATTGGAATGCAGCCCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCATATTTACTGTATTTCTTTGCTTATTGGAATGCAGCCCAGCA  600

seq1  TGTCTTCTAAGGGAGGTAGGATGAAAAATGTTTGTCTCTACAAGCCTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTAAGGGAGGTAGGATGAAAAATGTTTGTCTCTACAAGCCTTGC  650

seq1  ACAGCTAACTGTAAATTTTGGGGGTTAGAATGGGCCTTTCCTAGAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTAACTGTAAATTTTGGGGGTTAGAATGGGCCTTTCCTAGAAATGT  700

seq1  TGAGGTGGTTTTTCTTGTTTGTTTTTGTTTTTTGTTTTTTGGAAACAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGGTTTTTCTTGTTTGTTTTTGTTTTTTGTTTTTTGGAAACAGGG  750

seq1  CCTTCCTAAAAAGTCCAGACTGACAATAAGTTTGTGTTTTACCT-CCCTT  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCTTCCTAAAAAGTCCAGACTGACAATAAGTTTGTGTTTTACCTCCCCTT  800

seq1  AGCATCTTGTGGATGTCAGTACACATGCTGCTGGAATGAGCACACAAGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTTGTGGATGTCAGTACACATGCTGCTGGAATGAGCACACAAGCT  850

seq1  TTATAACGGTGTTTTTTCACTGCTATTGGACGTCTCATTGTTGCTGTAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACGGTGTTTTTTCACTGCTATTGGACGTCTCATTGTTGCTGTAGA  900

seq1  AAAAGCTGGTGACATGTGGGACTCCTAGTGATTTCTGATGGGAACTGCTT  949
      ||||| |||||| |||||||||||||||||||||||||| ||||||||||
seq2  AAAAGTTGGTGAAATGTGGGACTCCTAGTGATTTCTGAT-GGAACTGCTT  949

seq1  TATTTTAAAATTTTTATATTCACAGTGCTCTAAAATTTCATGAT-ATTAT  998
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TA-TTTAAAATTTTTATATTCACAGTGCTCTAAAATTTCATGATAATTAT  998

seq1  GTCTTGGAGTG-AGT-GAGGTAGG  1020
      ||||||||||| ||| ||||||||
seq2  GTCTTGGAGTGTAGTGGAGGTAGG  1022