BAC Information

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BAC

Clone NameB6Ng01-156P20
Chromosome4 (Build37)
Map Location 45,170,462 - 45,171,566
singlet/doubletsinglet
Overlap genenone
Upstream geneRnf38, Melk, Pax5, 5730488B01Rik, LOC545618, Zcchc7, D4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik
Downstream geneFrmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567, LOC100040580, Aldh1b1, Igfbpl1, 1300002K09Rik, Tdrd7, Tmod1, BC057893, AU014645
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156P20.bB6Ng01-156P20.g
ACCDH951344DH951345
length1,10696
definitionDH951344|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P20, 5' end.DH951345|Mus musculus domesticus DNA, BAC clone: B6Ng01-156P20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgtgtgaacacagatgagaggaaaatcggtctgatgccaccc
tgaccgggatcatctgcagaccccctgaatctaaagtttcctgatgaatt
gcctgtgctgcagcctgacccatcggtcctaagtggcacatggaccagtt
gtcttctccaggaagcccaagagtactgagcggcaaggctcctgtcccag
agtccttctgcccttccatcagcgcacactgattggggtttggggggtta
tcaggaaaggttccagagttgccatgctctggactcagaacccaatggca
gagtcctaaggggcaggagcaggacatataaagaatgcttcctgtgatgg
tttctgtatgctttgtccagggggtaggactattaggaggtgtggcccta
ttggagtaggtgtgtcactgtggccattggctttaagaccctcatcctag
ctgtctggaagccagtcttccattagcagcctccaggtgaagatatagaa
ctctcagctcaacctatgccatgcctgcctggatgttgccatgctcctgc
cttgatgataatggactgaacctctgaacctgtaagccagccccaattaa
atgttgtcctttataaaacttgcactggtcatggtgtctgttcacagcag
taaagccctaagacacttccttagcgacagcagaaacttcagcaggggga
gcctccctcaccagagccagcgaggccaggctttggtctgttcttgggtc
tcaggtggtccctcccctctgtgttctgagccaccatgttggtcctgtct
gctctgactcccgggcttttccctaccactagctcttccttgcctgtgag
ctcttctcggatctggcatttccgatctggggtttgtagtcccatctgca
caggcctcaggcctagcttggctcacccctgtgatatttgcacctagctt
tagatgttcctgagagcactctggatccttagagggtgtgaacagctaaa
gccatctggtaaagttctttttcaaacccaagctgtcagggcctataaaa
atgctccagcaggtaaagcttgctgccaagctgacaacctacacctgtgt
ggtggc
aacagcagtcagatctatacagtgagttcctatctggacaggacaacata
gtaaaaccctgactcaaaatgatggtggtgatggtggtggtggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_45170462_45171566
seq2: B6Ng01-156P20.b_48_1153 (reverse)

seq1  GCCA-CACACAG--GTAGGTTGTCAGGCTTGGCAGCAAGCCTTTACCTGC  47
      |||| |||||||  ||||||||||| ||||||||||||| ||||||||||
seq2  GCCACCACACAGGTGTAGGTTGTCA-GCTTGGCAGCAAG-CTTTACCTGC  48

seq1  T-GAGCCATCTTATAGGCCCTGACAGTCTGGGTTTGAAAAGAGACTTTAC  96
      | ||||  | ||||||||||||||||  ||||||||||||   |||||||
seq2  TGGAGCATTTTTATAGGCCCTGACAGCTTGGGTTTGAAAAAGAACTTTAC  98

seq1  CAGATGGCTTTAGCTGTTCACAACCCTCTAAGGATCCAGGAGTGCTCTCA  146
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  CAGATGGCTTTAGCTGTTCAC-ACCCTCTAAGGATCCA-GAGTGCTCTCA  146

seq1  GGAACATCTAAAGCTA-GTGCAAATATCACAGGGGTGAGCCAAGCTAGGC  195
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGAACATCTAAAGCTAGGTGCAAATATCACAGGGGTGAGCCAAGCTAGGC  196

seq1  CTGAGGCCTGTGCAGATGGGACTACAAACCCCAGATCGGAAATGCCAGAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCTGTGCAGATGGGACTACAAACCCCAGATCGGAAATGCCAGAT  246

seq1  CCGAGAAGAGCTCACAGGCAAGGAAGAGCTAGTGGTAGGGAAAAGCCCGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGAAGAGCTCACAGGCAAGGAAGAGCTAGTGGTAGGGAAAAGCCCGG  296

seq1  GAGTCAGAGCAGACAGGACCAACATGGTGGCTCAGAACACAGAGGGGAGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAGCAGACAGGACCAACATGGTGGCTCAGAACACAGAGGGGAGG  346

seq1  GACCACCTGAGACCCAAGAACAGACCAAAGCCTGGCCTCGCTGGCTCTGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTGAGACCCAAGAACAGACCAAAGCCTGGCCTCGCTGGCTCTGG  396

seq1  TGAGGGAGGCTCCCCCTGCTGAAGTTTCTGCTGTCGCTAAGGAAGTGTCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAGGCTCCCCCTGCTGAAGTTTCTGCTGTCGCTAAGGAAGTGTCT  446

seq1  TAGGGCTTTACTGCTGTGAACAGACACCATGACCAGTGCAAGTTTTATAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCTTTACTGCTGTGAACAGACACCATGACCAGTGCAAGTTTTATAA  496

seq1  AGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTCCAT  546

seq1  TATCATCAAGGCAGGAGCATGGCAACATCCAGGCAGGCATGGCATAGGTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCAAGGCAGGAGCATGGCAACATCCAGGCAGGCATGGCATAGGTT  596

seq1  GAGCTGAGAGTTCTATATCTTCACCTGGAGGCTGCTAATGGAAGACTGGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGAGTTCTATATCTTCACCTGGAGGCTGCTAATGGAAGACTGGC  646

seq1  TTCCAGACAGCTAGGATGAGGGTCTTAAAGCCAATGGCCACAGTGACACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGACAGCTAGGATGAGGGTCTTAAAGCCAATGGCCACAGTGACACA  696

seq1  CCTACTCCAATAGGGCCACACCTCCTAATAGTCCTACCCCCTGGACAAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTCCAATAGGGCCACACCTCCTAATAGTCCTACCCCCTGGACAAAG  746

seq1  CATACAGAAACCATCACAGGAAGCATTCTTTATATGTCCTGCTCCTGCCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAAACCATCACAGGAAGCATTCTTTATATGTCCTGCTCCTGCCC  796

seq1  CTTAGGACTCTGCCATTGGGTTCTGAGTCCAGAGCATGGCAACTCTGGAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACTCTGCCATTGGGTTCTGAGTCCAGAGCATGGCAACTCTGGAA  846

seq1  CCTTTCCTGATAACCCCCCAAACCCCAATCAGTGTGCGCTGATGGAAGGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTGATAACCCCCCAAACCCCAATCAGTGTGCGCTGATGGAAGGG  896

seq1  CAGAAGGACTCTGGGACAGGAGCCTTGCCGCTCAGTACTCTTGGGCTTCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGACTCTGGGACAGGAGCCTTGCCGCTCAGTACTCTTGGGCTTCC  946

seq1  TGGAGAAGACAACTGGTCCATGTGCCACTTAGGACCGATGGGTCAGGCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGACAACTGGTCCATGTGCCACTTAGGACCGATGGGTCAGGCTG  996

seq1  CAGCACAGGCAATTCATCAGGAAACTTTAGATTCAGGGGGTCTGCAGATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAGGCAATTCATCAGGAAACTTTAGATTCAGGGGGTCTGCAGATG  1046

seq1  ATCCCGGTCAGGGTGGCATCAGACCGATTTTCCTCTCATCTGTGTTCACA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGGTCAGGGTGGCATCAGACCGATTTTCCTCTCATCTGTGTTCACA  1096

seq1  CAGTGAATTC  1105
      ||||||||||
seq2  CAGTGAATTC  1106