BAC Information

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BAC

Clone NameB6Ng01-157I03
Chromosome4 (Build37)
Map Location 4,006,831 - 4,007,415
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039124, LOC100039141, EG666464, LOC100039044, LOC631371, LOC666513, Tmem68, Tgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik
Downstream genePenk1, A830012C17Rik, LOC100039297, LOC622019, Impad1, LOC100039338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I03.bB6Ng01-157I03.g
ACCDH951722DH951723
length8961,153
definitionDH951722|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I03, 5' end.DH951723|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtttatcttgctgcaaaaatcattatgcttcagcaacatacta
tgtttggaactacttagagaataagggatatgcagcattatcattatcat
tattattattattattattattattattattattatattttcttaaatta
catttcaaatgttattccctttcctggtttcccctctgaaaaccccctat
ctcctcttcactcccactgctcaccaacccacccactcctgcttcctgcc
cctggcattctcctatactgggatatagaaccttcaaaggactaagggcc
tctcctcccatcgatgaccgactaggccatcctccactacatatgcagct
agaaccacaagtccctctgtgtgttttctttgattggtggtttagtccca
gggagctctggggttactagttagttcatattgttgttcctcctatgggg
ctgcaaacccttcagctccttgggtcctttctctagctccttcattggag
accctgtgctccatctaatggatgactgtgagcatctacttctgtatttg
acaggaactggcagagcctctcaggagacagctatatcaggctcctgtca
gcaggctcttgttggcatctgccatggtgtctgggtttggtggttgttta
tgggatggatccccaggtgggtatgcatttttaaggcagcagccactatt
taaatgtccactgaactgtattttcagaccactagaagcatacaatttaa
tactctcaaaccctgatgtagttagtgttggccataacaatttttgttcc
caagtaagtgcttggacacttggagctaccaagaactctgtcatgaagcg
ttacagtgagtaaatactcaagtgccagctgtcactacttcattct
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagcctggccgttcctca
gaaaattgaacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagagaaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaagaatgaatttatgaaattcctagacaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
gaactcacacaatatgtactcactgataagtggatattagccccaaacct
aggatacccaagatataagatacaatttgccaaacacatgaaactcaaga
agaatgaagactgaagtgtggacattatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatcgaccatctagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctgtctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccat
ggaggagctagagaagtagtctaggagctaaagggatctgcacctatagt
ggacacatatgactaccagtacccggagctctgactctagctgcatatgt
atcaagatggctagtcgcatcctgaagagaggctccatgaaccgcaactt
taatgctcagataggaacgccaggcaagggggaggtgggtggttagggag
atg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4006831_4007415
seq2: B6Ng01-157I03.b_46_630 (reverse)

seq1  ATAGCTGTCTCCTGAGAGGCTCTGCCAGTTCCTGTCAAATACAGAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGTCTCCTGAGAGGCTCTGCCAGTTCCTGTCAAATACAGAAGTAG  50

seq1  ATGCTCACAGTCATCCATTAGATGGAGCACAGGGTCTCCAATGAAGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCACAGTCATCCATTAGATGGAGCACAGGGTCTCCAATGAAGGAGC  100

seq1  TAGAGAAAGGACCCAAGGAGCTGAAGGGTTTGCAGCCCCATAGGAGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAGGACCCAAGGAGCTGAAGGGTTTGCAGCCCCATAGGAGGAAC  150

seq1  AACAATATGAACTAACTAGTAACCCCAGAGCTCCCTGGGACTAAACCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATGAACTAACTAGTAACCCCAGAGCTCCCTGGGACTAAACCACC  200

seq1  AATCAAAGAAAACACACAGAGGGACTTGTGGTTCTAGCTGCATATGTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGAAAACACACAGAGGGACTTGTGGTTCTAGCTGCATATGTAGT  250

seq1  GGAGGATGGCCTAGTCGGTCATCGATGGGAGGAGAGGCCCTTAGTCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATGGCCTAGTCGGTCATCGATGGGAGGAGAGGCCCTTAGTCCTTT  300

seq1  GAAGGTTCTATATCCCAGTATAGGAGAATGCCAGGGGCAGGAAGCAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTCTATATCCCAGTATAGGAGAATGCCAGGGGCAGGAAGCAGGAG  350

seq1  TGGGTGGGTTGGTGAGCAGTGGGAGTGAAGAGGAGATAGGGGGTTTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTTGGTGAGCAGTGGGAGTGAAGAGGAGATAGGGGGTTTTCAG  400

seq1  AGGGGAAACCAGGAAAGGGAATAACATTTGAAATGTAATTTAAGAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAACCAGGAAAGGGAATAACATTTGAAATGTAATTTAAGAAAATA  450

seq1  TAATAATAATAATAATAATAATAATAATAATAATAATGATAATGATAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAATAATAATAATAATAATAATAATAATGATAATGATAATG  500

seq1  CTGCATATCCCTTATTCTCTAAGTAGTTCCAAACATAGTATGTTGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATATCCCTTATTCTCTAAGTAGTTCCAAACATAGTATGTTGCTGAA  550

seq1  GCATAATGATTTTTGCAGCAAGATAAACTGAATTC  585
      |||||||||||||||||||||||||||||||||||
seq2  GCATAATGATTTTTGCAGCAAGATAAACTGAATTC  585