BAC Information

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BAC

Clone NameB6Ng01-157K15
Chromosome4 (Build37)
Map Location 98,276,535 - 98,456,327
singlet/doubletdoublet
Overlap geneInadl, L1td1, Ankrd38
Upstream geneNfia, LOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1
Downstream geneLOC100039541, Usp1, Dock7, Angptl3, LOC665193, Atg4c, LOC665212, LOC638890, LOC100042589, Foxd3, Alg6, Itgb3bp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K15.bB6Ng01-157K15.g
ACCDH951836DH951837
length9961,003
definitionDH951836|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K15, 5' end.DH951837|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,276,535 - 98,277,537)(98,455,320 - 98,456,327)
sequence
gaattctgtttttctcagaatgcttgtcagacatgtagtagtgacccttc
aagtggagagtcaaatgtgcagatagtgagctcaggacatgaccgggttg
gatgtagaagacataaatgtggcctttgttagtggagctcatctcattga
gattattaaatcatatggagaagtatgcataggtgtttataaacagtacg
acgacaggcttttcaaagaagtagagacatgactaaagtctgaagcagga
atggcatgggccagtggacgtgttgcccagctgcctagtcaggtcacttt
tctatgagaaaagacatatcaggtcttaggttaatttcccccccttcttg
gtgctagggttgaattcagagcttcgtgtaaatgttcttacagtgaactt
catcaccagcttttgtgtgctaaacagaaagcatctttgtgagttttctg
cttttatttgtggaagataagacttcacataaatatatcttagcatagct
atattggtcttgcataatgagtgactagtgtaagacagtcatgatctcct
acacagtactgcctgttgtctgctggtcacatgatagaaatgagccacat
gatcagaactggtattttagaggtggttgtgtacctttcccctgctgatt
agattctagctcttctatgctctgctcatttaagatgacacccagcatcc
acataaccacaaggtgtgatctttctagagctgtgctatccccatccatc
actcttcctcatagtctgccatgtagggccttttatagacaccctgacat
cctttattgacagagcaaagtttgaagccaagtaagaagcctgggaatgt
ttgcagttcaagaacacaacactggagacatgactaggactagaggctgt
gcacagtttaaaagttgactgccatggtggcgccgaaagagtgacactgt
tctaaaatatcttctcaacatcagacattctaagaaggggttacta
gaattctgtggcagcgaggctgtgcttcgagccaagctctcttttcaagg
aaatccaaggtgctatttattttggcatgcagcctgttctgtgatgaaaa
gtggggtttttattattgcagaataaagaaggggtttgaggagaacaaaa
atgcaggcgcgggtctcagtttcaggactaaggaagagaagctttcttta
tgttttgacttgaaattaaatgggatttgaaaatgacatcataaaagaaa
ccagtgtagatggggcagggcaggagggaagatgtgcaggagctgggcta
acctgaggagaccatttctaacaaggtctagctgtacagggaccatcttt
ggtggactgcactagcagcctcaggccttccctccttactgaagttctga
aggacactttgttataaaatataatgtgcacggaggttggcctgcctggc
tggctcatgccaagatgccccctgagaaatcacaccgtgcaaaagacctg
atataaaggaggtttatttgaggaagggagggcctggagaaggggtagag
acagacagatggaaacagagccatgagggcagagaaggaggggacaaaga
aggacagaaatagggagggaaagactgggcaggaacacatgggaacaggg
agagggggtcaactggggtggcgagtagtccttttatatgtagcccacac
ctggcaaagggtgacggtgtataaggtggcaggtgatgatgtaacccact
gctaggtctctgggagaagcctggtggagctgcctgtaagccaacaaaca
cacttgccattctccccctagttaactggggaactttaggctggccacat
agcctctggctgccttagtgtcctcatctataatttagtaccagctccca
cgcttgcttgtgtgtgggagggggtataatgacacccattgcttggcact
tgttcatttttcgcataggtcgtttgaagatggattagtggtcccccctc
ccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_98276535_98277537
seq2: B6Ng01-157K15.b_49_1044

seq1  GAATTCTGTTTTTCTCAGAATGCTTGTCAGACATGTAGTAGTGACCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTTCTCAGAATGCTTGTCAGACATGTAGTAGTGACCCTTC  50

seq1  AAGTGGAGAGTCAAATGTGCAGATAGTGAGCTCAGGACATGACCGGGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAGAGTCAAATGTGCAGATAGTGAGCTCAGGACATGACCGGGTTG  100

seq1  GATGTAGAAGACATAAATGTGGCCTTTGTTAGTGGAGCTCATCTCATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAGAAGACATAAATGTGGCCTTTGTTAGTGGAGCTCATCTCATTGA  150

seq1  GATTATTAAATCATATGGAGAAGTATGCATAGGTGTTTATAAACAGTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTAAATCATATGGAGAAGTATGCATAGGTGTTTATAAACAGTACG  200

seq1  ACGACAGGCTTTTCAAAGAAGTAGAGACATGACTAAAGTCTGAAGCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACAGGCTTTTCAAAGAAGTAGAGACATGACTAAAGTCTGAAGCAGGA  250

seq1  ATGGCATGGGCCAGTGGACGTGTTGCCCAGCTGCCTAGTCAGGTCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATGGGCCAGTGGACGTGTTGCCCAGCTGCCTAGTCAGGTCACTTT  300

seq1  TCTATGAGAAAAGACATATCAGGTCTTAGGTTAATTTCCCCCCCTTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGAAAAGACATATCAGGTCTTAGGTTAATTTCCCCCCCTTCTTG  350

seq1  GTGCTAGGGTTGAATTCAGAGCTTCGTGTAAATGTTCTTACAGTGAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGGGTTGAATTCAGAGCTTCGTGTAAATGTTCTTACAGTGAACTT  400

seq1  CATCACCAGCTTTTGTGTGCTAAACAGAAAGCATCTTTGTGAGTTTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCAGCTTTTGTGTGCTAAACAGAAAGCATCTTTGTGAGTTTTCTG  450

seq1  CTTTTATTTGTGGAAGATAAGACTTCACATAAATATATCTTAGCATAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTGTGGAAGATAAGACTTCACATAAATATATCTTAGCATAGCT  500

seq1  ATATTGGTCTTGCATAATGAGTGACTAGTGTAAGACAGTCATGATCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTCTTGCATAATGAGTGACTAGTGTAAGACAGTCATGATCTCCT  550

seq1  ACACAGTACTGCCTGTTGTCTGCTGGTCACATGATAGAAATGAGCCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTACTGCCTGTTGTCTGCTGGTCACATGATAGAAATGAGCCACAT  600

seq1  GATCAGAACTGGTATTTTAGAGGTGGTTGTGTACCTTTCCCCTGCTGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAACTGGTATTTTAGAGGTGGTTGTGTACCTTTCCCCTGCTGATT  650

seq1  AGATTCTAGCTCTTCTATGCTCTGCTCATTTAAGATGACACCCAGCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTAGCTCTTCTATGCTCTGCTCATTTAAGATGACACCCAGCATCC  700

seq1  ACATAACCACAAGGTGTGATCTTTCTAGAGCTGTGCTATCCCCATCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACCACAAGGTGTGATCTTTCTAGAGCTGTGCTATCCCCATCCATC  750

seq1  ACTCTTCCTCATAGTCTGCCATGTAGGGCCTTTTATAGACACCCTGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCCTCATAGTCTGCCATGTAGGGCCTTTTATAGACACCCTGACAT  800

seq1  CCTTTATTGACAGAGCAAAGTTTGAAGCCAAGTAAGAAGCCTGGGAATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTGACAGAGCAAAGTTTGAAGCCAAGTAAGAAGCCTGGGAATGT  850

seq1  TTGCAGTTCAAAGAACACAACACTGGAGACATGACTAGGACCTAGAGGCT  900
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  TTGCAGTTC-AAGAACACAACACTGGAGACATGACTAGGA-CTAGAGGCT  898

seq1  GTGCACAGTTTTAAAAGTTGACATGCCATGGTGGCGCCGAAAGAGTTGAC  950
      |||||||| ||||||||||||| |||||||||||||||||||||| ||||
seq2  GTGCACAG-TTTAAAAGTTGAC-TGCCATGGTGGCGCCGAAAGAG-TGAC  945

seq1  ACTGTTCTAAAATTATCTTCTACAACATCAGACATTCTAAGATGGGTTTA  1000
      |||||||||||| |||||||| |||||||||||||||||||| ||| |||
seq2  ACTGTTCTAAAA-TATCTTCT-CAACATCAGACATTCTAAGAAGGGGTTA  993

seq1  CTA  1003
      |||
seq2  CTA  996

seq1: chr4_98455320_98456327
seq2: B6Ng01-157K15.g_67_1069 (reverse)

seq1  GGGGGGGGGGGAACAACCTTATCCATCTTCAAACGGAACCTATGGCGAAA  50
      |||| ||||||| ||  || |||||||||||||||  |||||| ||||||
seq2  GGGGAGGGGGGACCA--CTAATCCATCTTCAAACG--ACCTAT-GCGAAA  45

seq1  AATGAACAGGTGCCAAGCACTGGGTGTCATTTTACCCCCTCCCACACACA  100
      |||||||| |||||||||| ||||||||||| ||||||||||||||||||
seq2  AATGAACAAGTGCCAAGCAATGGGTGTCATTATACCCCCTCCCACACACA  95

seq1  AGCAAGCGTGGGAGCTGGTTCTAAATTATAGATGAGGACACTAAGGCAGC  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGCAAGCGTGGGAGCTGGTACTAAATTATAGATGAGGACACTAAGGCAGC  145

seq1  CAGAGGCTATGTGGCCAGCCTAAAGTTCCCCAGTTAACTAGGGGGAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTATGTGGCCAGCCTAAAGTTCCCCAGTTAACTAGGGGGAGAAT  195

seq1  GGCAAGTGTGTTTGTTGGCTTACAGGCAGCTCCACCAGGCTTCTCCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTGTGTTTGTTGGCTTACAGGCAGCTCCACCAGGCTTCTCCCAGA  245

seq1  GACCTAGCAGTGGGTTACATCATCACCTGCCACCTTATACACCGTCACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGCAGTGGGTTACATCATCACCTGCCACCTTATACACCGTCACCC  295

seq1  TTTGCCAGGTGTGGGCTACATATAAAAGGACTACTCGCCACCCCAGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGCCAGGTGTGGGCTACATATAAAAGGACTACTCGCCACCCCAGTTGA  345

seq1  CCCCCTCTCCCTGTTCCCATGTGTTCCTGCCCAGTCTTTCCCTCCCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTCCCTGTTCCCATGTGTTCCTGCCCAGTCTTTCCCTCCCTATT  395

seq1  TCTGTCCTTCTTTGTCCCCTCCTTCTCTGCCCTCATGGCTCTGTTTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTTCTTTGTCCCCTCCTTCTCTGCCCTCATGGCTCTGTTTCCAT  445

seq1  CTGTCTGTCTCTACCCCTTCTCCAGGCCCTCCCTTCCTCAAATAAACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTCTACCCCTTCTCCAGGCCCTCCCTTCCTCAAATAAACCTC  495

seq1  CTTTATATCAGGTCTTTTGCACGGTGTGATTTCTCAGGGGGCATCTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATCAGGTCTTTTGCACGGTGTGATTTCTCAGGGGGCATCTTGGC  545

seq1  ATGAGCCAGCCAGGCAGGCCAACCTCCGTGCACATTATATTTTATAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCAGCCAGGCAGGCCAACCTCCGTGCACATTATATTTTATAACAA  595

seq1  AGTGTCCTTCAGAACTTCAGTAAGGAGGGAAGGCCTGAGGCTGCTAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCTTCAGAACTTCAGTAAGGAGGGAAGGCCTGAGGCTGCTAGTGC  645

seq1  AGTCCACCAAAGATGGTCCCTGTACAGCTAGACCTTGTTAGAAATGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACCAAAGATGGTCCCTGTACAGCTAGACCTTGTTAGAAATGGTCT  695

seq1  CCTCAGGTTAGCCCAGCTCCTGCACATCTTCCCTCCTGCCCTGCCCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTTAGCCCAGCTCCTGCACATCTTCCCTCCTGCCCTGCCCCATC  745

seq1  TACACTGGTTTCTTTTATGATGTCATTTTCAAATCCCATTTAATTTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGTTTCTTTTATGATGTCATTTTCAAATCCCATTTAATTTCAAG  795

seq1  TCAAAACATAAAGAAAGCTTCTCTTCCTTAGTCCTGAAACTGAGACCCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACATAAAGAAAGCTTCTCTTCCTTAGTCCTGAAACTGAGACCCGC  845

seq1  GCCTGCATTTTTGTTCTCCTCAAACCCCTTCTTTATTCTGCAATAATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATTTTTGTTCTCCTCAAACCCCTTCTTTATTCTGCAATAATAAA  895

seq1  AACCCCACTTTTCATCACAGAACAGGCTGCATGCCAAAATAAATAGCACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACTTTTCATCACAGAACAGGCTGCATGCCAAAATAAATAGCACC  945

seq1  TTGGATTTCCTTGAAAAGAGAGCTTGGCTCGAAGCACAGCCTCGCTGCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTCCTTGAAAAGAGAGCTTGGCTCGAAGCACAGCCTCGCTGCCA  995

seq1  CAGAATTC  1008
      ||||||||
seq2  CAGAATTC  1003