BAC Information

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BAC

Clone NameB6Ng01-157P02
Chromosome4 (Build37)
Map Location 24,841,284 - 24,981,723
singlet/doubletdoublet
Overlap geneC230012O17Rik, Gpr63
Upstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik
Downstream geneFhl5, 1810074P20Rik, Prdx6-rs2, LOC665019, LOC625732, Fut9, LOC100040780, Hn1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157P02.bB6Ng01-157P02.g
ACCDH952034DH952035
length1,088922
definitionDH952034|Mus musculus domesticus DNA, BAC clone: B6Ng01-157P02, 5' end.DH952035|Mus musculus domesticus DNA, BAC clone: B6Ng01-157P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,980,633 - 24,981,723)(24,841,284 - 24,842,209)
sequence
gaattcacctgcctctacctcccaagcactgatatgtgccaccatgatca
gctgatcctaagttcttaattatttttattttccattcctgagctggaca
gtcctgcattttgtgaagtggaattggtgttcccatcagccactcacagg
atcctacttctataaacagaaagggcctgatgaaagcagaaacagaaact
ttaaaatggattcaacttttcatatatgtccagcacaaagtgacaaatgg
gaaagaactgaatggttagtttcagggagaggacattggattaccatatc
ttgtgaaaggcagagtgaacttcattatcaatgcaaatggagccctttct
ctaatcctaatctctttctctagtcctaatctctctgtggtagttgaagg
caatagcttccagacaggatctcagcaggagggatgcccctttgatttct
aacctagtctgttggagattaatataaggtacagttgaaaacagtgacct
tctataatgtacatatctatattgtaataatagatactgtgtacagtata
tattgtacattataaaatgtacaataatgtaatttctatcaaagtgtaat
ttttatcaaagtcatgcctagatcagttcccattcaagcattgcaggttt
gtttttcttgggctgtttatgctacatggcactgcacacctaattaattg
taaatgatttttcaatgtcattaaataactatattagctattactataac
taagccagccccccaataatcaaggttgagtcctatgaatttttcagctt
aaaagtcacactgttccgccaatcatattgtgcctagttgctgatgctct
attctgtccctggaaactgtataaaaacaccccaaacaggccaccaaggt
tctccacctctccttcgggttcccatgttggacaataaattcctcttgct
tttgcatcgatcccaggctctgcatgctcactttttttgggggggggggg
gggctccttgtaagctacagctcatcatagtcttacgaccctaatctatt
ttctatgtaacagaactgttgaatttccaattggctcc
gaattctttcccaagctcaacaatttctaaagtaagcctcaggccttttt
ctatttccagaaggatgaatattgattaaatttagtaatacatgcttcgt
agcaaaaattccatttagaggtaatgatgtttgagtatttttgttctgta
gcagtatgctctgtactgcattgtatgggaaatacagccaatttttcctt
aaatatctcattgcctcacaaggtaaatataacacaaatgatccaacaat
ttaactgaactacaaaataaagatctctaattttactttagaattgtcta
taattgcctttcatttttcagttctgcttattgcacagtagtatgtttta
tataactttaatttgctttaaatttgacttgttttgaatgtaggacatta
tgatatggcagttctttattacagacttgtaaatatttaaagacttgctc
tttcgtggctactcatataagatatcatatactgggcgctacaattggag
ttcagattattatcagtgtacagggatgcttgcagactcaccatgcattc
aacccggactgttcactgctccttagagcacattcattgttctcttcatg
gcattctgttttcagttcatcattgtggttggaactcagatctagcatgg
agctgtagctcaggcttcgtattcattagtcagtcatgtctgtattagtc
ttcctgttcttatagcctaccatggcagatgaggttgattcagacaggag
tctggaaagacatttaaaatgtcttgtgaatggaaagggagggagaagga
agagagtattatgttgaattttacaagtagccagaaataatataacatca
tcacaatcaaatcgtaccagtccatcctcgggttttgttttgttttgttt
attttgtgtgtgttgttttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_24980633_24981723
seq2: B6Ng01-157P02.b_47_1134 (reverse)

seq1  GGAGCACAATTGGGAAATCAACAG-TCTGGTACATAGAAAAATAGATTAG  49
      ||||| ||||||| || ||||||| |||| ||||||| ||||||||||| 
seq2  GGAGC-CAATTGGAAATTCAACAGTTCTGTTACATAG-AAAATAGATTA-  47

seq1  GGGTTGTAAGACTATGATGAGCTGTAGCTTACCAGG-GAGCCCCCCCCCC  98
      |||| ||||||||||||||||||||||||||| ||| |  ||||||||||
seq2  GGGTCGTAAGACTATGATGAGCTGTAGCTTACAAGGAGCCCCCCCCCCCC  97

seq1  CCAAAAAAAAGTGAGCAATGCAGAGCCTGGGATCGATGCAAAAGCAAGAG  148
      || ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCAAAAAAAGTGAGC-ATGCAGAGCCTGGGATCGATGCAAAAGCAAGAG  146

seq1  GAATTTATTGTTCCAACATGGGAACCCGAAGGAGAGGTGGAGAACCTTGG  198
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATTG-TCCAACATGGGAACCCGAAGGAGAGGTGGAGAACCTTGG  195

seq1  TGGCCTGTTTGGGGTGTTTTTATACAGTTTCCAGGGACAGAATAGAGCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGTTTGGGGTGTTTTTATACAGTTTCCAGGGACAGAATAGAGCAT  245

seq1  CAGCAACTAGGCACAATATGATTGGCGGAACAGTGTGACTTTTAAGCTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTAGGCACAATATGATTGGCGGAACAGTGTGACTTTTAAGCTGA  295

seq1  AAAATTCATAGGACTCAACCTTGATTATTGGGGGGCTGGCTTAGTTATAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCATAGGACTCAACCTTGATTATTGGGGGGCTGGCTTAGTTATAG  345

seq1  TAATAGCTAATATAGTTATTTAATGACATTGAAAAATCATTTACAATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTAATATAGTTATTTAATGACATTGAAAAATCATTTACAATTAA  395

seq1  TTAGGTGTGCAGTGCCATGTAGCATAAACAGCCCAAGAAAAACAAACCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGTGCAGTGCCATGTAGCATAAACAGCCCAAGAAAAACAAACCTG  445

seq1  CAATGCTTGAATGGGAACTGATCTAGGCATGACTTTGATAAAAATTACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTTGAATGGGAACTGATCTAGGCATGACTTTGATAAAAATTACAC  495

seq1  TTTGATAGAAATTACATTATTGTACATTTTATAATGTACAATATATACTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAGAAATTACATTATTGTACATTTTATAATGTACAATATATACTG  545

seq1  TACACAGTATCTATTATTACAATATAGATATGTACATTATAGAAGGTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTATCTATTATTACAATATAGATATGTACATTATAGAAGGTCAC  595

seq1  TGTTTTCAACTGTACCTTATATTAATCTCCAACAGACTAGGTTAGAAATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAACTGTACCTTATATTAATCTCCAACAGACTAGGTTAGAAATC  645

seq1  AAAGGGGCATCCCTCCTGCTGAGATCCTGTCTGGAAGCTATTGCCTTCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGCATCCCTCCTGCTGAGATCCTGTCTGGAAGCTATTGCCTTCAA  695

seq1  CTACCACAGAGAGATTAGGACTAGAGAAAGAGATTAGGATTAGAGAAAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCACAGAGAGATTAGGACTAGAGAAAGAGATTAGGATTAGAGAAAGG  745

seq1  GCTCCATTTGCATTGATAATGAAGTTCACTCTGCCTTTCACAAGATATGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATTTGCATTGATAATGAAGTTCACTCTGCCTTTCACAAGATATGG  795

seq1  TAATCCAATGTCCTCTCCCTGAAACTAACCATTCAGTTCTTTCCCATTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAATGTCCTCTCCCTGAAACTAACCATTCAGTTCTTTCCCATTTG  845

seq1  TCACTTTGTGCTGGACATATATGAAAAGTTGAATCCATTTTAAAGTTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGTGCTGGACATATATGAAAAGTTGAATCCATTTTAAAGTTTCT  895

seq1  GTTTCTGCTTTCATCAGGCCCTTTCTGTTTATAGAAGTAGGATCCTGTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCTTTCATCAGGCCCTTTCTGTTTATAGAAGTAGGATCCTGTGA  945

seq1  GTGGCTGATGGGAACACCAATTCCACTTCACAAAATGCAGGACTGTCCAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGATGGGAACACCAATTCCACTTCACAAAATGCAGGACTGTCCAG  995

seq1  CTCAGGAATGGAAAATAAAAATAATTAAGAACTTAGGATCAGCTGATCAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAATGGAAAATAAAAATAATTAAGAACTTAGGATCAGCTGATCAT  1045

seq1  GGTGGCACATATCAGTGCTTGGGAGGTAGAGGCAGGTGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCACATATCAGTGCTTGGGAGGTAGAGGCAGGTGAATTC  1088

seq1: chr4_24841284_24842209
seq2: B6Ng01-157P02.g_67_988

seq1  GAATTCTTTCCCAAGCTCAACAATTTCTAAAGTAAGCCTCAGGCCTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCAAGCTCAACAATTTCTAAAGTAAGCCTCAGGCCTTTTT  50

seq1  CTATTTCCAGAAGGATGAATATTGATTAAATTTAGTAATACATGCTTCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCAGAAGGATGAATATTGATTAAATTTAGTAATACATGCTTCGT  100

seq1  AGCAAAAATTCCATTTAGAGGTAATGATGTTTGAGTATTTTTGTTCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATTCCATTTAGAGGTAATGATGTTTGAGTATTTTTGTTCTGTA  150

seq1  GCAGTATGCTCTGTACTGCATTGTATGGGAAATACAGCCAATTTTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGCTCTGTACTGCATTGTATGGGAAATACAGCCAATTTTTCCTT  200

seq1  AAATATCTCATTGCCTCACAAGGTAAATATAACACAAATGATCCAACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTCATTGCCTCACAAGGTAAATATAACACAAATGATCCAACAAT  250

seq1  TTAACTGAACTACAAAATAAAGATCTCTAATTTTACTTTAGAATTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAACTACAAAATAAAGATCTCTAATTTTACTTTAGAATTGTCTA  300

seq1  TAATTGCCTTTCATTTTTCAGTTCTGCTTATTGCACAGTAGTATGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCCTTTCATTTTTCAGTTCTGCTTATTGCACAGTAGTATGTTTTA  350

seq1  TATAACTTTAATTTGCTTTAAATTTGACTTGTTTTGAATGTAGGACATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTTAATTTGCTTTAAATTTGACTTGTTTTGAATGTAGGACATTA  400

seq1  TGATATGGCAGTTCTTTATTACAGACTTGTAAATATTTAAAGACTTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGGCAGTTCTTTATTACAGACTTGTAAATATTTAAAGACTTGCTC  450

seq1  TTTCGTGGCTACTCATATAAGATATCATATACTGGGCGCTACAATTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTGGCTACTCATATAAGATATCATATACTGGGCGCTACAATTGGAG  500

seq1  TTCAGATTATTATCAGTGTACAGGGATGCTTGCAGACTCACCATGCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTATTATCAGTGTACAGGGATGCTTGCAGACTCACCATGCATTC  550

seq1  AACCCGGACTGTTCACTGCTCCTTAGAGCACATTCATTGTTCTCTTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGACTGTTCACTGCTCCTTAGAGCACATTCATTGTTCTCTTCATG  600

seq1  GCATTCTGTTTTCAGTTCATCATTGTGGTTGGAACTCAGATCTAGCATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTGTTTTCAGTTCATCATTGTGGTTGGAACTCAGATCTAGCATGG  650

seq1  AGCTGTAGCTCAGGCTTCGTATTCATTAGTCAGTCATGTCTGTATTAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAGCTCAGGCTTCGTATTCATTAGTCAGTCATGTCTGTATTAGTC  700

seq1  TTCCTGTTCTTATAGCCTACCATGGCAGATGAGGTTGATTCAGACAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTCTTATAGCCTACCATGGCAGATGAGGTTGATTCAGACAGGAG  750

seq1  TCTGGAAAGACATTTAAAATGTCTTGTGAATGGAAAGGGAGGGAGAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCTGGAAAGACATTTAAAATGTCTTGTGAATGGAAAGGGAGGGAGAAGG-  799

seq1  AAGAGAGTATTATGTTGAATTTTACAAGTAGCCAGAAATAATATAACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTATTATGTTGAATTTTACAAGTAGCCAGAAATAATATAACATC  849

seq1  ATCACAATCAAATCGTACCAGTCCATCCTCGGGTTTTTGTTTTGTTTTGT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  ATCACAATCAAATCGTACCAGTCCATCCTCGGG-TTTTGTTTTGTTTTG-  897

seq1  TTTATTTTGTGTTGTGTTGTTTTGTT  926
      ||||||||||| ||||||||||||||
seq2  TTTATTTTGTG-TGTGTTGTTTTGTT  922