BAC Information

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BAC

Clone NameB6Ng01-158F12
Chromosome4 (Build37)
Map Location 32,386,745 - 32,510,228
singlet/doubletdoublet
Overlap geneBach2
Upstream geneMap3k7, LOC665218, LOC665228, LOC665232
Downstream geneGja10, Casp8ap2, Mdn1, Lyrm2, Ankrd6, LOC665298, Rragd, 4933421O10Rik, Ube2j1, LOC100039142, Gabrr2, Gabrr1, Acy1l2, Srrp, Pnrc1, Rngtt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158F12.bB6Ng01-158F12.g
ACCDH952315DH952316
length9251,090
definitionDH952315|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F12, 5' end.DH952316|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,386,745 - 32,387,664)(32,509,116 - 32,510,228)
sequence
gaattcccagaggaacactacttacaggctgactggacacatctactcag
ctagctttcttctgtaactcagaactccctgccctccctggggtggggat
gggggtggggcagcatgctcatggtggccgattcccttctccatcaatgg
gcaaccaacaaaatgccccacagatacacttactggccgttccaaaggag
acagttcctcactggagagtccctcttcccaggcgtgtcatgttgacaac
tggaattagcaagcccagaagttaccactgctcaggaacttgcatagccg
tgttgtatagattctagcctgattctactcataaattgagccatcagatt
gcttctgtcacacttattcagcaagtggatcacctgcccaggctttggag
ccctgtgggctgcagtcatctgtgcaggttggcaacccagagaccgaact
cactgtatgtctcaaatgttccttgttttaaggagtttgaacagttgttg
gactacacactcaattaattacacaagttattaaactttgcaattaaatc
tgacttaattttttaagcatttggaggaatttgaggcagaatagcaaatc
atcaaatgaaagactgcaaagcctggcaaaacctggctagcttgcttgtc
acgtctgctccctctccggaatacggggcaggcactgcccatagtgtttg
acctagcaaagcattcagtttttcttcctgtcaagttggatttctgagcc
agcaataagagagcagagagccgggtctttgtctgaaaaatttctccaca
tttttatcatacggttcagatagtgagtgatcaatcttcgtggttgcctg
tattggggattttctaatttcagcacagctgatacaaacaggaacttata
tccctgattcatgtcaagtcgttgg
gaattcttggataaaaacagtttggaaggacacacaaaagcacctgatgt
aggtgagttgtatctttgtggctagattagagggaacatttgcgtttatt
cttttatgtggctttgacgattatgtaggataacacggatctaatgagaa
ttcagaccagttccagaagatgacattattcagtgtgcgtgggctgtgtg
agtgcacactgaggaccacaggataaactggcggtctcagagcaaagctg
ttgttaagtgaaccatgcatgagtttactttttcaagaaggtatacgccg
aagtgacctctgctttgccacaaggagacaattatttttggattctgact
tttttctagaaattacaacagttaatacataagactcatgtaattatctg
atttggtgtcaactaagggtagaatacgggaaaaatctagacacaacagt
ttctaatctacaacgcacaggggcttcgataaacccactggtttgtagag
cgtcacagatgctgtcctggggcagaagagcagtgacacatctcaacaca
gccattctctgcagtgtatgccaccagtgtggcagataccaggccctctt
gtgatgaatgggggttcctagaagggcaagttgccacttcaccattaatg
tgagggtgaggcaatctggtaagcgaatatatgctaaaattgctttacca
agattaacatatgaatgaagccagttggcacagaaagattggaagccttt
ctccacctgggtttcatctaacaaagagaacatgtgcaaaaaaaaaaatt
aaaaataaaaaaaagtgtgtaaagtacacacaagggaggtgtgtgctgtg
aaatggtctctaaagggctgtgtgcctgcagtccaacaccttggggcatt
tcctcccagttcactcactgtctggagatgctcactgaccttcagacagt
ttcactatctatgctatccctacaccctggtgcacgcatgcatgctcaca
tggaggctttatgcatctaaattgctggttcctcttcttctcatctcctc
tgcagcggcttggaattatagcttgcctaccagtgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_32386745_32387664
seq2: B6Ng01-158F12.b_48_972

seq1  GAATTCCCAGAGGAACACTACTTACAGGCTGACTGGACACATCTACTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGGAACACTACTTACAGGCTGACTGGACACATCTACTCAG  50

seq1  CTAGCTTTCTTCTGTAACTCAGAACTCCCTGCCCTCCCTGGGGTGGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTTCTTCTGTAACTCAGAACTCCCTGCCCTCCCTGGGGTGGGGAT  100

seq1  GGGGGTGGGGCAGCATGCTCATGGTGGCCGATTCCCTTCTCCATCAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGCAGCATGCTCATGGTGGCCGATTCCCTTCTCCATCAATGG  150

seq1  GCAACCAACAAAATGCCCCACAGATACACTTACTGGCCGTTCCAAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCAACAAAATGCCCCACAGATACACTTACTGGCCGTTCCAAAGGAG  200

seq1  ACAGTTCCTCACTGGAGAGTCCCTCTTCCCAGGCGTGTCATGTTGACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCTCACTGGAGAGTCCCTCTTCCCAGGCGTGTCATGTTGACAAC  250

seq1  TGGAATTAGCAAGCCCAGAAGTTACCACTGCTCAGGAACTTGCATAGCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTAGCAAGCCCAGAAGTTACCACTGCTCAGGAACTTGCATAGCCG  300

seq1  TGTTGTATAGATTCTAGCCTGATTCTACTCATAAATTGAGCCATCAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATAGATTCTAGCCTGATTCTACTCATAAATTGAGCCATCAGATT  350

seq1  GCTTCTGTCACACTTATTCAGCAAGTGGATCACCTGCCCAGGCTTTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTCACACTTATTCAGCAAGTGGATCACCTGCCCAGGCTTTGGAG  400

seq1  CCCTGTGGGCTGCAGTCATCTGTGCAGGTTGGCAACCCAGAGACCGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGGGCTGCAGTCATCTGTGCAGGTTGGCAACCCAGAGACCGAACT  450

seq1  CACTGTATGTCTCAAATGTTCCTTGTTTTAAGGAGTTTGAACAGTTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTATGTCTCAAATGTTCCTTGTTTTAAGGAGTTTGAACAGTTGTTG  500

seq1  GACTACACACTCAATTAATTACACAAGTTATTAAACTTTGCAATTAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACACACTCAATTAATTACACAAGTTATTAAACTTTGCAATTAAATC  550

seq1  TGACTTAATTTTTTAAGCATTTGGAGGAATTTGAGGCAGAATAGCAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAATTTTTTAAGCATTTGGAGGAATTTGAGGCAGAATAGCAAATC  600

seq1  ATCAAATGAAAGACTGCAAAGCCTGGCAAAACCTGGCTAGCTTGCTTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGAAAGACTGCAAAGCCTGGCAAAACCTGGCTAGCTTGCTTGTC  650

seq1  ACGTCTGCT-CCTCTCCGGAATACGGGGCAGGCACTGCCCATAGTGTTTG  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTGCTCCCTCTCCGGAATACGGGGCAGGCACTGCCCATAGTGTTTG  700

seq1  ACCTAGCAAAGCATTCAG-TTTTCTTCCTGTCAAGTTGGA-TTCTGAGCC  747
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  ACCTAGCAAAGCATTCAGTTTTTCTTCCTGTCAAGTTGGATTTCTGAGCC  750

seq1  AGCAATAAGAGAGCAGAGAGCCGGG-CCTTGTCTG-AAAATTTCTCCACA  795
      ||||||||||||||||||||||||| | ||||||| ||||||||||||||
seq2  AGCAATAAGAGAGCAGAGAGCCGGGTCTTTGTCTGAAAAATTTCTCCACA  800

seq1  TTTTTATCATACGGTTCAGATAGTGAGTGATCAATCTCTGTGGTTGCCTG  845
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  TTTTTATCATACGGTTCAGATAGTGAGTGATCAATCTTCGTGGTTGCCTG  850

seq1  TATT-GGGATTTTCTTAATTCAGCACAGCTGAATACAAACAGGAACTCAA  894
      |||| |||||||||| | ||||||||||||| ||||||||||||||| | 
seq2  TATTGGGGATTTTCTAATTTCAGCACAGCTG-ATACAAACAGGAACTTAT  899

seq1  AT-CCTGAATCATGTCAAGTCAGTTGG  920
      || ||||| |||||||||||| |||||
seq2  ATCCCTGATTCATGTCAAGTC-GTTGG  925

seq1: chr4_32509116_32510228
seq2: B6Ng01-158F12.g_65_1154 (reverse)

seq1  AAAAACAACTGGGTAGGCAAGCTATAGATCTCAGAAGCCGCTGGCAGGAG  50
      |||||| ||| |||||||||||||||  ||    |||||||| ||| |||
seq2  AAAAAC-ACT-GGTAGGCAAGCTATAATTC---CAAGCCGCT-GCA-GAG  43

seq1  GAGATGGAGAAGAAGAGAGAAACCCAGGCCATTTTAAGATGCATAAAAGC  100
      ||||| ||||||||||| |||  ||||  || ||| |||||||| |||||
seq2  GAGAT-GAGAAGAAGAG-GAA--CCAG--CAATTT-AGATGCAT-AAAGC  85

seq1  CTCCATGTTGAGCATTGGCATTGCGTGGCACCAGGGTGTAGGGAATAGCA  150
      ||||||| |||||||  ||| ||||| |||||||||||||||| ||||||
seq2  CTCCATG-TGAGCAT--GCA-TGCGT-GCACCAGGGTGTAGGG-ATAGCA  129

seq1  TAGATAGTGAAACTGTCTGGAAGGTCAGTGAGCATTCTCCAGACAGTGAG  200
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  TAGATAGTGAAACTGTCT-GAAGGTCAGTGAGCA-TCTCCAGACAGTGAG  177

seq1  TGAACTGGGAGGAAATGCCCCAAGGTGTTGGACTGCAGGCACACAGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGGGAGGAAATGCCCCAAGGTGTTGGACTGCAGGCACACAGCCCT  227

seq1  TTAGAGGCCATTTCACAGCACACACCTCCCTTGTGTGTACTTTACACACT  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGACCATTTCACAGCACACACCTCCCTTGTGTGTACTTTACACACT  277

seq1  TTTTTTTATTTTTAATTTTTTTTTTTGCACATGTTCTCTTTGTTAGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTTTTAATTTTTTTTTTTGCACATGTTCTCTTTGTTAGATGA  327

seq1  AACCCAGGTGGAGAAAGGCTTCCAATCTTTCTGTGCCAACTGGCTTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGTGGAGAAAGGCTTCCAATCTTTCTGTGCCAACTGGCTTCATT  377

seq1  CATATGTTAATCTTGGTAAAGCAATTTTAGCATATATTCGCTTACCAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTTAATCTTGGTAAAGCAATTTTAGCATATATTCGCTTACCAGAT  427

seq1  TGCCTCACCCTCACATTAATGGTGAAGTGGCAACTTGCCCTTCTAGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACCCTCACATTAATGGTGAAGTGGCAACTTGCCCTTCTAGGAAC  477

seq1  CCCCATTCATCACAAGAGGGCCTGGTATCTGCCACACTGGTGGCATACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTCATCACAAGAGGGCCTGGTATCTGCCACACTGGTGGCATACAC  527

seq1  TGCAGAGAATGGCTGTGTTGAGATGTGTCACTGCTCTTCTGCCCCAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAATGGCTGTGTTGAGATGTGTCACTGCTCTTCTGCCCCAGGAC  577

seq1  AGCATCTGTGACGCTCTACAAACCAGTGGGTTTATCGAAGCCCCTGTGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGTGACGCTCTACAAACCAGTGGGTTTATCGAAGCCCCTGTGCG  627

seq1  TTGTAGATTAGAAACTGTTGTGTCTAGATTTTTCCCGTATTCTACCCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGATTAGAAACTGTTGTGTCTAGATTTTTCCCGTATTCTACCCTTA  677

seq1  GTTGACACCAAATCAGATAATTACATGAGTCTTATGTATTAACTGTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACACCAAATCAGATAATTACATGAGTCTTATGTATTAACTGTTGTA  727

seq1  ATTTCTAGAAAAAAGTCAGAATCCAAAAATAATTGTCTCCTTGTGGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGAAAAAAGTCAGAATCCAAAAATAATTGTCTCCTTGTGGCAAA  777

seq1  GCAGAGGTCACTTCGGCGTATACCTTCTTGAAAAAGTAAACTCATGCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGTCACTTCGGCGTATACCTTCTTGAAAAAGTAAACTCATGCATG  827

seq1  GTTCACTTAACAACAGCTTTGCTCTGAGACCGCCAGTTTATCCTGTGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTAACAACAGCTTTGCTCTGAGACCGCCAGTTTATCCTGTGGTC  877

seq1  CTCAGTGTGCACTCACACAGCCCACGCACACTGAATAATGTCATCTTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTGCACTCACACAGCCCACGCACACTGAATAATGTCATCTTCTG  927

seq1  GAACTGGTCTGAATTCTCATTAGATCCGTGTTATCCTACATAATCGTCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGTCTGAATTCTCATTAGATCCGTGTTATCCTACATAATCGTCAA  977

seq1  AGCCACATAAAAGAATAAACGCAAATGTTCCCTCTAATCTAGCCACAAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATAAAAGAATAAACGCAAATGTTCCCTCTAATCTAGCCACAAAG  1027

seq1  ATACAACTCACCTACATCAGGTGCTTTTGTGTGTCCTTCCAAACTGTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTCACCTACATCAGGTGCTTTTGTGTGTCCTTCCAAACTGTTTT  1077

seq1  TATCCAAGAATTC  1113
      |||||||||||||
seq2  TATCCAAGAATTC  1090