BAC Information

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BAC

Clone NameB6Ng01-158J12
Chromosome4 (Build37)
Map Location 93,794,244 - 93,795,393
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158J12.bB6Ng01-158J12.g
ACCDH952500DH952501
length1,114274
definitionDH952500|Mus musculus domesticus DNA, BAC clone: B6Ng01-158J12, 5' end.DH952501|Mus musculus domesticus DNA, BAC clone: B6Ng01-158J12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggagccagattacttgagctggaatggctatatgacattgtac
agtttacttaaactccgtgctttaattttctttcttataaaatgaagttt
aagatcgtaggtacttcatatgggtgaggtttttgttgattaatcaatat
atgcaaaatagtatttatagcattgttagcaacaaatgattttaaagcct
tttaaaccatttactgtgtacaatagtttatactaggcactaaggacatg
ctggtgggtcatggtagaaaaacttgttgccaacagaaataacatgactg
tggaaaaacattgtaagccaatggggtgaataagagaatttaaatagtaa
taaatagcatgaagaaaataagataatgctcataactcctaatactgaag
ttgaaattcttaactgaattttcattttattattgagcaaagtaaaatgt
aaaaaaatgtacaatcttttctttgcttcaaaatttctcagaactataag
tagttttgtataaagatgtggagatttccaaaacttgaatacaattctgt
gtgtgcctttttttcccctatgggctacattttctacaaggtttctcttt
tgagtattgagagatcacttggattataacggtttctgtatggatgagat
cacttacttccaaccaagatgaaggtcaagtcaataaccagtttctcatt
ctttattttactttacatgaactacagttcgttgatcttagaactggtca
gtcctcagatgaacataatagaaattagattacttcaaggatatgtaaaa
atagagttaaaacaacatggggttattttaattttgcctcatttgcttta
aggctggactgcttggtttcatttgatatactcattagatccaaagtgat
atacttctgatttgacaattattgccaaaaaagtcacttatacagaagta
tatcacattacataggcataagctatttatttcagcactagagtgacagg
gcccgagaatagtagtagctccatgtcagttctgacatctgggtgtctcg
cttttttttctcattggaacccgactaaaaaacatgacgtagagcaatga
agtctattgtgagt

atgaaattcacaggcaaatggatggatctagaaaatatcctgagtgagat
aactgagtcacaaaagaacacacatggtatgtactcactgataagtgaat
attaggcaaagagcacggaatacccacaatacaactcacggacctcatga
cgctcaagaggaagggagaccagagtggttacttcagtcctacttagaag
gtagaacaaaataataaagggaagtagagggtgggagggacttgggagaa
agagaaaaaagggggggggagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93794244_93795393
seq2: B6Ng01-158J12.b_47_1160 (reverse)

seq1  ACTCACATAAGACTTCATTGTGCTTTCTACGTCTATGTTTTTCTAAGTGC  50
      |||||||  |||||||||||     |||||||| |||||||  | ||| |
seq2  ACTCACAATAGACTTCATTG----CTCTACGTC-ATGTTTT--TTAGT-C  42

seq1  GTGTTCCCAATTGGGGGAAAAAAAAGCGAGAACACCCAAGATGTCCAGGA  100
      | ||| |||||   | |||||||||||||| |||||| |||||| |||  
seq2  GGGTT-CCAAT---GAGAAAAAAAAGCGAG-ACACCC-AGATGT-CAG--  83

seq1  AACCTTGACAATGGGAGCCTACTACTGGTTTCTCGGGCCCCTGTTCACTC  150
      |||  |||||   |||| ||||||||   |||||||| ||||| ||||||
seq2  AAC--TGACA--TGGAG-CTACTACT--ATTCTCGGG-CCCTG-TCACTC  124

seq1  TAGTGCTGAAATAAATAGCTTTATTGCCTATTGTAATGGTGATATACCTT  200
      |||||||||||||||||||||   |||||| |||||| |||||||| |||
seq2  TAGTGCTGAAATAAATAGCTT--ATGCCTA-TGTAAT-GTGATATA-CTT  169

seq1  CTTGTTATTAAGTGGCTTTTTTGGCAATAAATTGTCAAATCAGAAGTATT  250
      | |||   |||||| ||||||||||||| ||||||||||||||||||| |
seq2  C-TGT--ATAAGTGACTTTTTTGGCAAT-AATTGTCAAATCAGAAGTA-T  214

seq1  ATCACTTTGGATCTAATGAGTATATCAAATGAAACCAAGCAGTCCAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTGGATCTAATGAGTATATCAAATGAAACCAAGCAGTCCAGCCT  264

seq1  TAAAGCAAATGAGGCAAAATT-AAATAACCCCATGTTGTTTTAACTCTAT  349
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  TAAAGCAAATGAGGCAAAATTAAAATAACCCCATGTTGTTTTAACTCTA-  313

seq1  TTTTTACATATCCTTGAAGTAATCTAATTTCTATTATGTTCATCTGAGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACATATCCTTGAAGTAATCTAATTTCTATTATGTTCATCTGAGGA  363

seq1  CTGACCAGTTCTAAGATCAACGAACTGTAGTTCATGTAAAGTAAAATAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAGTTCTAAGATCAACGAACTGTAGTTCATGTAAAGTAAAATAAA  413

seq1  GAATGAGAAACTGGTTATTGACTTGACCTTCATCTTGGTTGGAAGTAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAAACTGGTTATTGACTTGACCTTCATCTTGGTTGGAAGTAAGT  463

seq1  GATCTCATCCATACAGAAACCGTTATAATCCAAGTGATCTCTCAATACTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCATCCATACAGAAACCGTTATAATCCAAGTGATCTCTCAATACTC  513

seq1  AAAAGAGAAACCTTGTAGAAAATGTAGCCCATAGGGGAAAAAAAGGCACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAACCTTGTAGAAAATGTAGCCCATAGGGGAAAAAAAGGCACA  563

seq1  CACAGAATTGTATTCAAGTTTTGGAAATCTCCACATCTTTATACAAAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAATTGTATTCAAGTTTTGGAAATCTCCACATCTTTATACAAAACT  613

seq1  ACTTATAGTTCTGAGAAATTTTGAAGCAAAGAAAAGATTGTACATTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAGTTCTGAGAAATTTTGAAGCAAAGAAAAGATTGTACATTTTTT  663

seq1  TACATTTTACTTTGCTCAATAATAAAATGAAAATTCAGTTAAGAATTTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTACTTTGCTCAATAATAAAATGAAAATTCAGTTAAGAATTTCA  713

seq1  ACTTCAGTATTAGGAGTTATGAGCATTATCTTATTTTCTTCATGCTATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTATTAGGAGTTATGAGCATTATCTTATTTTCTTCATGCTATTT  763

seq1  ATTACTATTTAAATTCTCTTATTCACCCCATTGGCTTACAATGTTTTTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTATTTAAATTCTCTTATTCACCCCATTGGCTTACAATGTTTTTCC  813

seq1  ACAGTCATGTTATTTCTGTTGGCAACAAGTTTTTCTACCATGACCCACCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATGTTATTTCTGTTGGCAACAAGTTTTTCTACCATGACCCACCA  863

seq1  GCATGTCCTTAGTGCCTAGTATAAACTATTGTACACAGTAAATGGTTTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTCCTTAGTGCCTAGTATAAACTATTGTACACAGTAAATGGTTTAA  913

seq1  AAGGCTTTAAAATCATTTGTTGCTAACAATGCTATAAATACTATTTTGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTAAAATCATTTGTTGCTAACAATGCTATAAATACTATTTTGCA  963

seq1  TATATTGATTAATCAACAAAAACCTCACCCATATGAAGTACCTACGATCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGATTAATCAACAAAAACCTCACCCATATGAAGTACCTACGATCT  1013

seq1  TAAACTTCATTTTATAAGAAAGAAAATTAAAGCACGGAGTTTAAGTAAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTCATTTTATAAGAAAGAAAATTAAAGCACGGAGTTTAAGTAAAC  1063

seq1  TGTACAATGTCATATAGCCATTCCAGCTCAAGTAATCTGGCTCCAGAATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAATGTCATATAGCCATTCCAGCTCAAGTAATCTGGCTCCAGAATT  1113

seq1  C  1150
      |
seq2  C  1114


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