BAC Information

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BAC

Clone NameB6Ng01-158K22
Chromosome4 (Build37)6 (Build37)
Map Location 127,190,743 - 127,191,40291,982,510 - 91,982,614
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320, Sfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296
Downstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158K22.bB6Ng01-158K22.g
ACCDH952567DH952568
length664941
definitionDH952567|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K22, 5' end.DH952568|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(127,190,743 - 127,191,402)(91,982,510 - 91,982,614)
sequence
gaattccatttcccagtctcaagtgcatgcttggttgatgctggagttat
agggtttgcttaaactcatttattaatttatccatctcttcacttgtcca
ccaactttcttatccatcctttgatccatccatcatttatttgtctgcct
gctgtctatctatctatctatctatctatctatctatctatctatctatc
tatctatccatccatatattcctttgtccattaatctctttattcaatga
ttcagtcatctctcttatttattcagtcatccatccatccaaccatccat
cttttatttgtccatccatccatccatccatccatccatccatccatcca
tccagtcatgtattcctttgcccattaatctttttattatgttattcaac
gattaagtaatttctctaattttctcagtcactcatccatctacctacct
actcactcatcctctctcccatcctcctggccttttgttcgctccctcat
cctttggtaacatcagtttctcagacagtctctgataatagagttggagg
ctcctgaccctggctctggaaggcagaggccgaggcacacaccaagggtc
atgctgtaggttgaacatgtttattatttgagggagaatcctggtacatt
tgtgtgtgtgtgtg
gaattctctttgctaatacttcattaaatgtttgtgtctgtactcaagaa
ggctattgtctacagtattcatttttcacatcatctctatctgtttattt
atgggagtactacaagattaataagataaattaagaatttccatgtgtgt
ctctctatgtctgtgtgtctctgtctgtctgtctgtctgtctctctctct
ctctctctctctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtatcccctg
tttttctgtgaaagattaaatgcaattgatgttatccttctactgtttgg
cagcatcctccatcaaaaccaccttcacctaaagatttctttttggagag
ttaaaaaactatgaatgtaacttttattaaataaatcaaatctctagtgg
ctagagacttgaatgatctgtctccttttgggtgagttgtagtactcagt
atttttgaaggaactggtccatttcatctaaattgtcagatcctcatgct
tatcaatgtactacctattcgcctgtcctttggtgtctgtagggtcagta
gtgatggctctttttttaactttgatactaacaatctaagtcttgactct
ttgtcagtcttgctatcaacatgtcaactttattaatatttttaaagaaa
caaggttttgtctttcattgcttttctatatcctttttcctcctttcaat
gttattaatttctactctttattatttcttcattctccttggtttgggct
tgttttgctattctttctccacagtaaataaaaagagcttaggctcctat
gtggaggggttcttctcccttggttatcaatgactcacaaatttcattta
atttgttttctttgagccttcttctttgacccatggatattagaagtatc
tagtatccatgcttggaacttttcttcctttaatgatttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_127190743_127191402
seq2: B6Ng01-158K22.b_46_709

seq1  GAATTCCATTTCCCAGTCTCAAGTGCATGCTTGGTTGATGCTGGAGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTCCCAGTCTCAAGTGCATGCTTGGTTGATGCTGGAGTTAT  50

seq1  AGGGTTTGCTTAAACTCATTTATTAATTTATCCATCTCTTCACTTGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGCTTAAACTCATTTATTAATTTATCCATCTCTTCACTTGTCCA  100

seq1  CCAACTTTCTTATCCATCCTTTGATCCATCCATCATTTATTTGTCTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTTCTTATCCATCCTTTGATCCATCCATCATTTATTTGTCTGCCT  150

seq1  GCTG----TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC  196
      ||||    ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC  200

seq1  TATCTATCCATCCATATATTCCTTTGTCCATTAATCTCTTTATTCAATGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCCATCCATATATTCCTTTGTCCATTAATCTCTTTATTCAATGA  250

seq1  TTCAGTCATCTCTCTTATTTATTCAGTCATCCATCCATCCAACCATCCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCATCTCTCTTATTTATTCAGTCATCCATCCATCCAACCATCCAT  300

seq1  CTTTTATTTGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA  350

seq1  TCCAGTCATGTATTCCTTTGCCCATTAATCTTTTTATTATGTTATTCAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCATGTATTCCTTTGCCCATTAATCTTTTTATTATGTTATTCAAC  400

seq1  GATTAAGTAATTTCTCTAATTTTCTCAGTCACTCATCCATCTACCTACCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGTAATTTCTCTAATTTTCTCAGTCACTCATCCATCTACCTACCT  450

seq1  ACTCACTCATCCTCTCTCCCATCCTCCTGGCCTTTTGTTCGCTCCCTCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCATCCTCTCTCCCATCCTCCTGGCCTTTTGTTCGCTCCCTCAT  500

seq1  CCTTTGGTAACATCAGTTTCTCAGACAGTCTCTGATAATAGAGTTGGAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGTAACATCAGTTTCTCAGACAGTCTCTGATAATAGAGTTGGAGG  550

seq1  CTCCTGACCCTGGCTCTGGAAGGCAGAGGCCGAGGCACACACCAAGGGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGACCCTGGCTCTGGAAGGCAGAGGCCGAGGCACACACCAAGGGTC  600

seq1  ATGCTGTAGGTTGAACATGTTTATTATTTGAGGGAGAATCCTGGTACATT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAGGTTGAACATGTTTATTATTTGAGGGAGAATCCTGGTACATT  650

seq1  TGTGTGTGTGTGTG  660
      ||||||||||||||
seq2  TGTGTGTGTGTGTG  664

seq1: chr6_91982510_91982614
seq2: B6Ng01-158K22.g_215_326 (reverse)

seq1  ACAGAAAACACAGGAGATACACACACACACACACACACACACACAC----  46
      |||||||| ||||| |||||||||||||||||||||||||||||||    
seq2  ACAGAAAA-ACAGGGGATACACACACACACACACACACACACACACAAAG  49

seq1  --ACACACACACACAGAGAGACAGACAGACAGACAGAC--AGACAGACAG  92
        | | | | | | ||||||||||||||||||||||||  ||||| ||||
seq2  AGAGAGAGAGAGAGAGAGAGACAGACAGACAGACAGACAGAGACACACAG  99

seq1  ACAGACAGAGACA  105
      ||| | |||||||
seq2  ACATAGAGAGACA  112