BAC Information

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BAC

Clone NameB6Ng01-158L13
Chromosome6 (Build37)4 (Build37)
Map Location 18,835,442 - 18,835,96817,839,673 - 17,840,762
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158L13.bB6Ng01-158L13.g
ACCDH952596DH952597
length9301,082
definitionDH952596|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L13, 5' end.DH952597|Mus musculus domesticus DNA, BAC clone: B6Ng01-158L13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(17,839,673 - 17,840,762)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtatcatgcagtttttaccataattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatctttcacttccttagttagagtcacg
gaattctttgtattcccatctctgctagggattgcctataatgtgaacta
tgctttaagtaacatgtcagaatcatttatctatatattattacaccaga
gaagacaaatgtgactgaaaattgaggtcagtgtatctagatgtgaaaaa
acagaactaaaaattgaatttttcaaagaaaattgcatcctttatgtcat
acttgttttagaatattattcatggttacagtggcaaatgacagcataat
attttgccgagcagagtattgattctcacaatacattttctctagctata
agttatatggattataaagatagccacatgtaggcatttttcttcgagtc
ttaaattactccacagttgccaattagctgaaaagaatttttaaatgaag
tatttataatgcgtgaatacttcaaagaaacttaagtttaaaatgcatac
agccaagaggtttataactgcaactattttgatcagagaaacaaacttgc
tcattcatgcagattctgctgtgcaaagaagctcttcctgcagggagcct
ccaggtgtgtcctttttccttaatgaatgcaagagagcaatgtaaccact
gtatatgctgaaggtctaaaagatgctttaatgtttaatgaaaaatatta
ttggatgacaagtcattttatcaagcaaattcttagaaagttttgagaat
ctaatacaaacataaattgcaagaaagaagtttatttttcattctttaac
acaatgtagccatatcttgcccctgttaaacctgtaggtgcctccataga
tggcagtgtgtgaacacttaaattcaagtgacaactctttttactaataa
caaacttaaaaataagcatgtagcatgtttgtttgtgtatcattttcttc
aatacagtctcacactcatccacaaatactgagtgcattttaaatttgta
tacttggtgagaattgagcttcaaattggattgactgagttcaaatacag
ctttatttcagcattaaagctcttatttttgagctttgctagactcttga
aacataatcagtgaaactgtctgccatttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-158L13.b_49_576 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGTGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr4_17839673_17840762
seq2: B6Ng01-158L13.g_68_1149

seq1  GAATTCTTTGTATTCCCATCTCTGCTAGGGATTGCCTATAATGTGAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATTCCCATCTCTGCTAGGGATTGCCTATAATGTGAACTA  50

seq1  TGCTTTAAGTAACATGTCAGAATCATTTATCTATATATTATTACACCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAAGTAACATGTCAGAATCATTTATCTATATATTATTACACCAGA  100

seq1  GAAGACAAATGTGACTGAAAATTGAGGTCAGTGTATCTAGATGTGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAAATGTGACTGAAAATTGAGGTCAGTGTATCTAGATGTGAAAAA  150

seq1  ACAGAACTAAAAATTGAATTTTTCAAAGAAAATTGCATCCTTTATGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTAAAAATTGAATTTTTCAAAGAAAATTGCATCCTTTATGTCAT  200

seq1  ACTTGTTTTAGAATATTATTCATGGTTACAGTGGCAAATGACAGCATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTTAGAATATTATTCATGGTTACAGTGGCAAATGACAGCATAAT  250

seq1  ATTTTGCCGAGCAGAGTATTGATTCTCACAATACATTTTCTCTAGCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCGAGCAGAGTATTGATTCTCACAATACATTTTCTCTAGCTATA  300

seq1  AGTTATATGGATTATAAAGATAGCCACATGTAGGCATTTTTCTTCGAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATGGATTATAAAGATAGCCACATGTAGGCATTTTTCTTCGAGTC  350

seq1  TTAAATTACTCCACAGTTGCCAATTAGCTGAAAAGAATTTTTAAATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTACTCCACAGTTGCCAATTAGCTGAAAAGAATTTTTAAATGAAG  400

seq1  TATTTATAATGCGTGAATACTTCAAAGAAACTTAAGTTTAAAATGCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATGCGTGAATACTTCAAAGAAACTTAAGTTTAAAATGCATAC  450

seq1  AGCCAAGAGGTTTATAACTGCAACTATTTTGATCAGAGAAACAAACTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGAGGTTTATAACTGCAACTATTTTGATCAGAGAAACAAACTTGC  500

seq1  TCATTCATGCAGATTCTGCTGTGCAAAGAAGCTCTTCCTGCAGGGAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATGCAGATTCTGCTGTGCAAAGAAGCTCTTCCTGCAGGGAGCCT  550

seq1  CCAGGTGTGTCCTTTTTCCTTAATGAATGCAAGAGAGCAATGTAACCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGTGTCCTTTTTCCTTAATGAATGCAAGAGAGCAATGTAACCACT  600

seq1  GTATATGCTGAAGGTCTAAAAGATGCTTTAATGTTTAATGAAAAATATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGCTGAAGGTCTAAAAGATGCTTTAATGTTTAATGAAAAATATTA  650

seq1  TTGGATGACAAGTCATTTTATCAAGCAAATTCTTAGAAAGTTTTGAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGACAAGTCATTTTATCAAGCAAATTCTTAGAAAGTTTTGAGAAT  700

seq1  CTAATACAAACATAAATTGCAAGAAAGAAGTTTATTTTTCATTCTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACAAACATAAATTGCAAGAAAGAAGTTTATTTTTCATTCTTTAAC  750

seq1  ACAATGTAGCCATATCTTGCCCCTGTTAAACCTGTAGGTGCCTCCATAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTAGCCATATCTTGCCCCTGTTAAACCTGTAGGTGCCTCCATAGA  800

seq1  TGGCAGTGTGTGAACACTTAAATTCAAGTGACAACTCTTTTTACTAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTGTGTGAACACTTAAATTCAAGTGACAACTCTTTTTACTAATAA  850

seq1  CAAACTTAAAAATAAGCATGTAGCATGTTTGTTTGTGTATCATTTTCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTAAAAATAAGCATGTAGCATGTTTGTTTGTGTATCATTTTCTTC  900

seq1  AATACAAGTCTCACACTCATCCACAAATACTGAGTGCATTTTAAATTTTG  950
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATAC-AGTCTCACACTCATCCACAAATACTGAGTGCATTTTAAA-TTTG  948

seq1  TATACTTGGTGAGAATTGAGCTTCAAATTGGATTGACTGAGGTTCAAATA  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATACTTGGTGAGAATTGAGCTTCAAATTGGATTGACTGA-GTTCAAATA  997

seq1  CAGCTTTATTTCAAGCCATTAAAGCTCTTATTTTTGAGCCTATGCTAGAC  1050
      |||||||||||||   |||||||||||||||||||||| || ||||||||
seq2  CAGCTTTATTTCA--GCATTAAAGCTCTTATTTTTGAG-CTTTGCTAGAC  1044

seq1  TC-TGAAACATAATCAGTGAGACATGTCTGGCCCATTTCCT  1090
      || ||||||||||||||||| || ||||||  |||||||||
seq2  TCTTGAAACATAATCAGTGAAAC-TGTCTG--CCATTTCCT  1082