BAC Information

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BAC

Clone NameB6Ng01-158M06
Chromosome4 (Build37)
Map Location 150,434,057 - 150,571,493
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneGpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158M06.bB6Ng01-158M06.g
ACCDH952629DH952630
length1,023489
definitionDH952629|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M06, 5' end.DH952630|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,570,451 - 150,571,493)(150,434,057 - 150,434,551)
sequence
gaattccttccaaggatgaattctgtcaattgacttgtaagatcagcaac
aggtgtcctctgccctccgaagacactgtgggctctagggcctgccctgc
ctggtttgtcatctcccacccctcatttcctatctctagggaaagccttc
accaaagggcagctctcccacacaagcctggttaccaccatacaaagtaa
cttaagcaagggccttggtccctgccttgggaatgggatgcatcggttgc
catagacacgggaggtcctggacagacctcccagccctggcaggctgggc
acccgcagggagtaacagaagaggtttcaggtgttcttgaccaccacagc
ctctctagaggagtgtttgaggccagcagctgccaccccacacgtggctg
tttcaagccagggaacgtctgctctgagatggtactggtttgccagcacg
ggaccctcatgggagaggctcagatcaatgctccagttttatctttcttg
aggctcagggtgatgagaactaacctgtgtctgtggctgataaaatacca
gaaacctgctgtattggcttccctttgattttcatgaacaattacctcca
gcatgcctggcgtttgcaggctgagattttaagtgtccaaaaaaacttcc
caactgagcccaccagggacttgtctgagctgctttttcatatactggaa
aaaaaaaacagtaatctgcaaaagagcttgggagtacattttgaatttca
ggcatagacattccctgttctctggagatgtaggggaaaagctcttcaga
ccctaagacacagggtcccaccagcttcctcggggctgaagaacaccctg
gctacatagtatggccaggccacttctcggggattgtgtttggggaatga
ctgggaggagattgcatttcctgatcactgtgttcttctctgggagcatt
acaggcgtggatgggacgtccgcatcttttaaccagagcagactcacagt
tcacgctgcttaacataggatgg
agattatccaagaaagctgcgcctatcaccttatattcaaaattaagagt
tacaatcaaaaaaggtggtcataaatgctttgtgtcagtggaagtatgct
tcgacctcacctagaattcacagttgtactggtaggttttgaccctactt
ctatctcctccataagaacttcctaattctatgtaagtctttatcttcca
gagttttctaacatattcagctaatgtggcatgtgaaacactaaaaaata
aatgtgagggttgaagcaaatccactgaggtcattgctctggtcaaatga
ttggtcatctgaaccataagcaatggagtaaatgtatccagatccatgat
tgagataggatattctgaaaagagctggctttacattctattccctgtta
tgaatacaattgtttatgtaaattactcagtgtcctcagacaggtcaaat
tgtgtaaaataataggtgtggtgggggcgggggtagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150570451_150571493
seq2: B6Ng01-158M06.b_47_1069 (reverse)

seq1  CCATCCTATGTGTAGACAGCCGTGAAAACTGTTGAGTCTGCTCTGGTTAT  50
      ||||||||||| ||  ||| ||||  ||||| |||||||||||||||  |
seq2  CCATCCTATGT-TAAGCAG-CGTG--AACTG-TGAGTCTGCTCTGGT--T  43

seq1  AAAAGATGGCGGGACGTCCCAATCCCACGGCCTGCTAATGCTCCCAGAGA  100
      ||||||||   ||||||||||   |||| ||||| |||||||||||||||
seq2  AAAAGATG--CGGACGTCCCA--TCCAC-GCCTG-TAATGCTCCCAGAGA  87

seq1  AGAACACAGTGTATCCAGGGAAAATGCAATCTCCTCCCCAGTCATTCCCC  150
      ||||||||||| || ||||  |||||||||||||| ||||||||||||||
seq2  AGAACACAGTG-AT-CAGG--AAATGCAATCTCCT-CCCAGTCATTCCCC  132

seq1  AAACCACAATCCCCGAGAGTTGGCCCTGGCCATACTATGTAGCCAGGGTG  200
      ||| ||||||||||||||  ||| ||||||||||||||||||||||||||
seq2  AAA-CACAATCCCCGAGAAGTGG-CCTGGCCATACTATGTAGCCAGGGTG  180

seq1  TTCTTCAGCCCCGAGGAAGCTGGTGGGACCCTGTGTCTTAGGGTCTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGCCCCGAGGAAGCTGGTGGGACCCTGTGTCTTAGGGTCTGAAG  230

seq1  AGCTTTTCCCCTACATCTCCAGGGAACAGGGAATGTCTATGCCTGAAATT  300
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGCTTTTCCCCTACATCTCCAGAGAACAGGGAATGTCTATGCCTGAAATT  280

seq1  CAAAATGTACTCCCAAGCTCTTTTGCAGATTACTGTTTTTTTTTTCCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTACTCCCAAGCTCTTTTGCAGATTACTGTTTTTTTTTTCCAGT  330

seq1  ATATGAAAAAGCAGCTCAGACAAGTCCCTGGTGGGCTCAGTTGGGAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAAAGCAGCTCAGACAAGTCCCTGGTGGGCTCAGTTGGGAAGTT  380

seq1  TTTTTGGACACTTAAAATCTCAGCCTGCAAACGCCAGGCATGCTGGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGACACTTAAAATCTCAGCCTGCAAACGCCAGGCATGCTGGAGGT  430

seq1  AATTGTTCATGAAAATCAAAGGGAAGCCAATACAGCAGGTTTCTGGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCATGAAAATCAAAGGGAAGCCAATACAGCAGGTTTCTGGTATT  480

seq1  TTATCAGCCACAGACACAGGTTAGTTCTCATCACCCTGAGCCTCAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGCCACAGACACAGGTTAGTTCTCATCACCCTGAGCCTCAAGAAA  530

seq1  GATAAAACTGGAGCATTGATCTGAGCCTCTCCCATGAGGGTCCCGTGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACTGGAGCATTGATCTGAGCCTCTCCCATGAGGGTCCCGTGCTG  580

seq1  GCAAACCAGTACCATCTCAGAGCAGACGTTCCCTGGCTTGAAACAGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCAGTACCATCTCAGAGCAGACGTTCCCTGGCTTGAAACAGCCAC  630

seq1  GTGTGGGGTGGCAGCTGCTGGCCTCAAACACTCCTCTAGAGAGGCTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGTGGCAGCTGCTGGCCTCAAACACTCCTCTAGAGAGGCTGTGG  680

seq1  TGGTCAAGAACACCTGAAACCTCTTCTGTTACTCCCTGCGGGTGCCCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAGAACACCTGAAACCTCTTCTGTTACTCCCTGCGGGTGCCCAGC  730

seq1  CTGCCAGGGCTGGGAGGTCTGTCCAGGACCTCCCGTGTCTATGGCAACCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGGGCTGGGAGGTCTGTCCAGGACCTCCCGTGTCTATGGCAACCG  780

seq1  ATGCATCCCATTCCCAAGGCAGGGACCAAGGCCCTTGCTTAAGTTACTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCCCATTCCCAAGGCAGGGACCAAGGCCCTTGCTTAAGTTACTTT  830

seq1  GTATGGTGGTAACCAGGCTTGTGTGGGAGAGCTGCCCTTTGGTGAAGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTGGTAACCAGGCTTGTGTGGGAGAGCTGCCCTTTGGTGAAGGCT  880

seq1  TTCCCTAGAGATAGGAAATGAGGGGTGGGAGATGACAAACCAGGCAGGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTAGAGATAGGAAATGAGGGGTGGGAGATGACAAACCAGGCAGGGC  930

seq1  AGGCCCTAGAGCCCACAGTGTCTTCGGAGGGCAGAGGACACCTGTTGCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTAGAGCCCACAGTGTCTTCGGAGGGCAGAGGACACCTGTTGCTG  980

seq1  ATCTTACAAGTCAATTGACAGAATTCATCCTTGGAAGGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACAAGTCAATTGACAGAATTCATCCTTGGAAGGAATTC  1023

seq1: chr4_150434057_150434551
seq2: B6Ng01-158M06.g_67_561

seq1  GAATTCAGATTATCCAAGAAAGCTGCGCCTATCACCTTATATTCAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTATCCAAGAAAGCTGCGCCTATCACCTTATATTCAAAATT  50

seq1  AAGAGTTACAATCAAAAAAGGTGGTCATAAATGCTTTGTGTCAGTGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTACAATCAAAAAAGGTGGTCATAAATGCTTTGTGTCAGTGGAAG  100

seq1  TATGCTTCGACCTCACCTAGAATTCACAGTTGTACTGGTAGGTTTTGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTCGACCTCACCTAGAATTCACAGTTGTACTGGTAGGTTTTGACC  150

seq1  CTACTTCTATCTCCTCCATAAGAACTTCCTAATTCTATGTAAGTCTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTATCTCCTCCATAAGAACTTCCTAATTCTATGTAAGTCTTTAT  200

seq1  CTTCCAGAGTTTTCTAACATATTCAGCTAATGTGGCATGTGAAACACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGTTTTCTAACATATTCAGCTAATGTGGCATGTGAAACACTAA  250

seq1  AAAATAAATGTGAGGGTTGAAGCAAATCCACTGAGGTCATTGCTCTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGTGAGGGTTGAAGCAAATCCACTGAGGTCATTGCTCTGGTC  300

seq1  AAATGATTGGTCATCTGAACCATAAGCAATGGAGTAAATGTATCCAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTGGTCATCTGAACCATAAGCAATGGAGTAAATGTATCCAGATC  350

seq1  CATGATTGAGATAGGATATTCTGAAAAGAGCTGGCTTTACATTCTATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTGAGATAGGATATTCTGAAAAGAGCTGGCTTTACATTCTATTCC  400

seq1  CTGTTATGAATACAATTGTTTATGTAAATTACTCAGTGTCCTCAGACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATGAATACAATTGTTTATGTAAATTACTCAGTGTCCTCAGACAGG  450

seq1  TCAAATTGTGTAAAATAATAGGTGTGGTGGGGGCGGGGGTAGGGG  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTGTGTAAAATAATAGGTGTGGTGGGGGCGGGGGTAGGGG  495