BAC Information

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BAC

Clone NameB6Ng01-158O13
Chromosome4 (Build37)
Map Location 38,413,546 - 38,414,666
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487, 1700009N14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O13.bB6Ng01-158O13.g
ACCDH952729DH952730
length5241,115
definitionDH952729|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O13, 5' end.DH952730|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctcctatcaaaaagaaatacagggacaaagagtggagcagagactgaaaa
aaagaaaaaaaaaagggggggggcatccaaagactgacccatttagggat
ccatcccatatgcagacaccaaacccagacaatattgctgatgccgaaaa
gtgcttactaacaggagcctggtatagctctctgctgagaggatcttcca
gagcctgaccaatacagatgcagtggactgagggcaggaaccccaatgga
ggagttagggcaaggactgaagaagctgaaggtgtttgcaaacccataaa
aagaacaacaatgtcaaccaaccatattcccaaaagctccaagggactaa
accaccaaccaaggagtacacatggggggacccatggctccaactagata
tgtagcagaggatggccttgtctggcatcaatgggaggggattcccttgg
cactgtggtagctcaatgacacagtgcagggcaatgctagggcgctgagg
caggagtgggtgggtgggtgggtg

gaattcactggccatggggaaaggaggggagggagagtgcagctactgtt
atgtggcatagctgagaataagactgagagatttgatttacagtagccca
aggagatcttatggcctgtagtgagcctaccagctcagtctccacttcag
ggttctcatggaattcctgagtatgtgaacatgtgcatatttattcttgt
gctttctcttgaactttattccttttactggtttggcctgtccaaattta
tgttataaattttattttatttcatcataatatatttaataatgtcatta
taatataatataatataatataaatatatatgattatatattttttattt
ttaaaatgaaagtgtatatgaatgaataaatgaatgaatgaatgaatgaa
tgaatgaatatctagcccctagggcaaagattaactgacctaaaattcat
acattgggtatgtcaaccacttcaaaatgagcctcatgttcatgagttgt
tgaccaacatataacccacatataatggactccatagttttctgcttaca
gttcagtttgattgtttgttttcttttggcttcgcattttattttgtttt
cttgggtttagtttctttctttctttttctttctttcttttttttttcaa
gagaacttaaaggaagagtatctgaaaggctttggcagagtggtaaaata
taataaaaagatatataaattaaaaattgttttaaaaataaaaaattgaa
aagttaaaaaaaataaacagttctgtggagcttcttggaattatgttgct
tgcagtttgctgatacagcttactatttatttacagtttaaaataagtgt
actttattaaattcatatctttttacatattaaacatgaatttgaatatc
agtatatatttaaagatgattcatacatcttaaaccactaacatttcata
tgatcagaaatttgtagatacttatgatagggaaccaagttgtatttgtg
gaagaaaaaaaatcaagaaaaaatccaagcctcattactaagccatcaat
atttttcaactttcatgcatcgagtagtcagtggcacttgcagccatgaa
ttcaaatttattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38413546_38414666
seq2: B6Ng01-158O13.g_69_1183

seq1  GAATTCACTGGCCATGGGGAAAGGAGGGGAGGGAGAGTGCAGCTACTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGCCATGGGGAAAGGAGGGGAGGGAGAGTGCAGCTACTGTT  50

seq1  ATGTGGCATAGCTGAGAATAAGACTGAGAGATTTGATTTACAGTAGCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCATAGCTGAGAATAAGACTGAGAGATTTGATTTACAGTAGCCCA  100

seq1  AGGAGATCTTATGGCCTGTAGTGAGCCTACCAGCTCAGTCTCCACTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCTTATGGCCTGTAGTGAGCCTACCAGCTCAGTCTCCACTTCAG  150

seq1  GGTTCTCATGGAATTCCTGAGTATGTGAACATGTGCATATTTATTCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCATGGAATTCCTGAGTATGTGAACATGTGCATATTTATTCTTGT  200

seq1  GCTTTCTCTTGAACTTTATTCCTTTTACTGGTTTGGCCTGTCCAAATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTCTTGAACTTTATTCCTTTTACTGGTTTGGCCTGTCCAAATTTA  250

seq1  TGTTATAAATTTTATTTTATTTCATCATAATATATTTAATAATGTCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAATTTTATTTTATTTCATCATAATATATTTAATAATGTCATTA  300

seq1  TAATATAATATAATATAATATAAATATATATGATTATATATTTTTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAATATAATATAATATAAATATATATGATTATATATTTTTTATTT  350

seq1  TTAAAATGAAAGTGTATATGAATGAATAAATGAATGAATGAATGAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGAAAGTGTATATGAATGAATAAATGAATGAATGAATGAATGAA  400

seq1  TGAATGAATATCTAGCCCCTAGGGCAAAGATTAACTGACCTAAAATTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATATCTAGCCCCTAGGGCAAAGATTAACTGACCTAAAATTCAT  450

seq1  ACATTGGGTATGTCAACCACTTCAAAATGAGCCTCATGTTCATGAGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGGTATGTCAACCACTTCAAAATGAGCCTCATGTTCATGAGTTGT  500

seq1  TGACCAACATATAACCCACATATAATGGACTCCATAGTTTTCTGCTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAACATATAACCCACATATAATGGACTCCATAGTTTTCTGCTTACA  550

seq1  GTTCAGTTTGATTGTTTGTTTTCTTTTGGCTTCGCATTTTATTTTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGTTTGATTGTTTGTTTTCTTTTGGCTTCGCATTTTATTTTGTTTT  600

seq1  CTTGGGTTTAGTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTTTTTTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTTAGTTTCTTTCTTTCTTTTTCTTTCTTTCTTTTTTTTTTCAA  650

seq1  GAGAACTTAAAGGAAGAGTATCTGAAAGGCTTTGGCAGAGTGGTAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTAAAGGAAGAGTATCTGAAAGGCTTTGGCAGAGTGGTAAAATA  700

seq1  TAATAAAAAGATATATAAATTAAAAATTGTTTTAAAAATAAAAAATTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAGATATATAAATTAAAAATTGTTTTAAAAATAAAAAATTGAA  750

seq1  AAGTTAAAAAAAATAAACAGTTCTGTGGAGCTTCTTGGAATTATGTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAAAAAAATAAACAGTTCTGTGGAGCTTCTTGGAATTATGTTGCT  800

seq1  TGCAG-TTGCTGATACAGCTTACTATTTAATTACAGTTTAAAATAAGTGT  849
      ||||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGCAGTTTGCTGATACAGCTTACTATTTATTTACAGTTTAAAATAAGTGT  850

seq1  ACTTTATTAAATTCATATCTTCTTACATATTAAACATGAATTTGAATATC  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTTTATTAAATTCATATCTTTTTACATATTAAACATGAATTTGAATATC  900

seq1  AGTATATATTTAAAGATGAATTCATAACATCTTAAA-CACTAACAATTTC  948
      |||||||||||||||||| |||||| |||||||||| ||||||| |||||
seq2  AGTATATATTTAAAGATG-ATTCAT-ACATCTTAAACCACTAAC-ATTTC  947

seq1  ATATGATCAGAAATTTGTAGATACTTATGATAGGAAACCAAAAGTTGTAT  998
      |||||||||||||||||||||||||||||||||| ||||  |||||||||
seq2  ATATGATCAGAAATTTGTAGATACTTATGATAGGGAACC--AAGTTGTAT  995

seq1  TTGTGAAGAAAAAAAAATCAAGAAAAAATCCAAG-CTCATTAACTAAGGC  1047
      ||||| |  ||||||||||||||||||||||||| |||||| |||||| |
seq2  TTGTGGAAGAAAAAAAATCAAGAAAAAATCCAAGCCTCATT-ACTAAGCC  1044

seq1  ATCAATATTTTTACAACTTCCATGCATCGAGTAAGTCATGTGCACTTGGC  1097
      |||||||||||| |||||| |||||||||||| |||||   |||||| ||
seq2  ATCAATATTTTT-CAACTTTCATGCATCGAGT-AGTCAGTGGCACTT-GC  1091

seq1  AAGCATGATTTCAAATTTATTTTT  1121
      |  ||||| |||||||||||||||
seq2  AGCCATGAATTCAAATTTATTTTT  1115


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