BAC Information

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BAC

Clone NameB6Ng01-159G19
Chromosome4 (Build37)
Map Location 94,136,602 - 94,304,459
singlet/doubletdoublet
Overlap gene5830433M19Rik, Plaa, LOC667250, Lrrc19
Upstream genenone
Downstream geneIft74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159G19.bB6Ng01-159G19.g
ACCDH953093DH953094
length1,2071,103
definitionDH953093|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G19, 5' end.DH953094|Mus musculus domesticus DNA, BAC clone: B6Ng01-159G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,303,227 - 94,304,459)(94,136,602 - 94,137,718)
sequence
gaattcacagaattaaagaatatgctgcctaaacttaaaaacaaaatttc
ctcaaaaatttgtagcactttaaagcacagatgtagtgatttggaataat
ccctactaaccactactgcatttgacagtggttgttaggaagaattccat
atacaactgccatgattgatattacaatggctcctaaaatgggcatcata
acaattatgaattttctttaaaagactaaacgtttctctatttcttttgg
gagattatttttaaaattattgtgagctagaactgagaatatttaagtaa
tccacacacatctatctctgtttcaataaacagagcaatgtttcccaaat
tgatttgtagaacactgattttctataatgacactgacaaccatttatag
aggaagaaaaaggcaactggtcaaattactgaaggaatctaaatctaaac
atagttaaagatttttttcctttagtacttatagattttactaagttcag
gtgttctctgataactcaagagtacagtactaagtttttgaagggcatct
atatagcatgttcaggtccctgggttcatttctctctctctcctctcctc
tctctctctctctctctctctctctctctgtatgtgtattccatacacac
acagaaacattaaaatttatttgataaacaaaccctttcttggaagaata
gctaatagctcacaacatattaatagattaaaagacacattctgaaaaaa
tagccctaacataggaagggtctatctaaagtgaaatgtttgccaattct
cttataatagctaagccgcaaatattattttaacaacttaacagtttaaa
gaatgaaattaaaaaccagcaaaatatgtattttaccattgtatacatgg
aaaaactaagtgtatttacttgcatctgtaaacactgaacatttatggat
gaagtagtgtacacattttctgtggtttttctttgtatacatgagaaaga
aaaaagttgaaatggaacacaggagaaatggtgacaacagaccttgggtc
ttgatcacgagatacatgctctgacattccaatttctctttataagaaat
tcaaagatgaatggtagcttctttcaaaggactatatgagatcttttcta
tttttcaatatgctctccaggacaatgtacaaggcactgatgtaacttct
ttcctga
gaattccaaccaatagcacactgtgttcaaacctctctgcaggtcaagga
ctgaagagagcaagaaatgaatatgaaaggaaagaacaaagaagaagcac
ccagaggactctactggaacaggatacagggacgagtgcttgttatgagg
agccagtgggatgggctctttgtggtaggtaacagttgatcattaaaaca
ttaaaaggcgttcaaagcatgaatggtctggaatccatgtaagactacct
cttcttgtctatttaatgaaatgaaagggggagtctaaagacagtaagtc
ccagaaccatggctaggtctatgacaaagctgtacctataccagggccct
tgtcatacttcactgtcctctgcccacatgactgtcccattctctcatca
tcaccaagccaatggttgttcccacatttatggagcaactttctgtgtct
taaaacacactatgaaacataaacacaatgttttttacatcaaaagctcc
ctttgacttcaagatcttttgctgcatgctaacagaagaaagtgcattga
gcatttgttcagcaaatgccccatcagtgcctactatgtgtcaggtacac
aaaaacaaatagtacagatgatctcatcaagaagcctgtgaatacactta
gctatgtagagcacatctgcgaatccgtatgatccagtaaatacactttg
ttcagagtgtcttggaaacaaagaggctagatcttaactggcctacacag
tgagaggggaagagaaagcctcactgagagctgagactggagaagacccc
gaggaaaactactgatcgacagacaggcgaaagaccacattcttctctgc
tatcggttgcctgagcctattagactattcaaatagtagaagggccaggt
acctggtgattaataattttgagaggaacagaggcatactgaccttgcta
tgatagatggttagaatatgttatcggaatgctccattagtcagctaagt
actatttttctccggagatttttttccacgggtcatttttatatagagca
tttttcactcccatgagaaataacctgttccttgagggagaggagagatg
aac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_94303227_94304459
seq2: B6Ng01-159G19.b_49_1255 (reverse)

seq1  TCAGTGAAAGAAGTTATCAATCAGTAGGCTTTGTACATTGTCCTTGATGA  50
      |||| |||||||||||   ||||||  || |||||||||||||| || ||
seq2  TCAG-GAAAGAAGTTA--CATCAGT--GCCTTGTACATTGTCCTGGA-GA  44

seq1  GCATTATTTGAAAATTATGAAAAGATCTTCATTATTAGTCTTTTTTTGTA  100
      ||||   ||||||| || ||||||||| ||||   |||||    |||| |
seq2  GCAT--ATTGAAAAATA-GAAAAGATC-TCAT--ATAGTC---CTTTGAA  85

seq1  AGAAGGTATCATGTACATTCTTTTGAATATCTTTATTAAAGAGAAATTGG  150
      ||||| || ||  | |||   ||||||| ||||   ||||||||||||||
seq2  AGAAGCTACCA--TTCAT--CTTTGAATTTCTT--ATAAAGAGAAATTGG  129

seq1  AATGTCAGAGCATTGTATGCTCGTGTATCATGTACCAAGGTCTGTTGTCA  200
      |||||||||||| ||||| |||||| |||| |  ||||||||||||||||
seq2  AATGTCAGAGCA-TGTAT-CTCGTG-ATCAAGACCCAAGGTCTGTTGTCA  176

seq1  -CATTTCTACCTGTGTTCCATCTTCAACTCTTTTCCTTCTCATGTATACA  249
       ||||||| |||||||||||| ||||||| ||||| ||||||||||||||
seq2  CCATTTCT-CCTGTGTTCCAT-TTCAACTTTTTTCTTTCTCATGTATACA  224

seq1  AAG-AAAATCACAGAAAATGTGTTACACTACTTCATCCATAAATGTTCAG  298
      ||| |||| ||||||||||||| |||||||||||||||||||||||||||
seq2  AAGAAAAACCACAGAAAATGTG-TACACTACTTCATCCATAAATGTTCAG  273

seq1  TGTTTTACAGATGCAAGTAAATACACTTAGTTTTTCCATGTATACAATGG  348
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TTTACAGATGCAAGTAAATACACTTAGTTTTTCCATGTATACAATGG  322

seq1  TAAAATACATATTTTGCTGGTTTTTAATTTCATTCTTTAAACTGTTAAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATACATATTTTGCTGGTTTTTAATTTCATTCTTTAAACTGTTAAGT  372

seq1  TGTTAAAATAATATTTGCGGCTTAGCTATTATAAGAGAATTGGCAAACAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAATAATATTTGCGGCTTAGCTATTATAAGAGAATTGGCAAACAT  422

seq1  TTCACTTTAGATAGACCCTTCCTATGTTAGGGCTATTTTTTCAGAATGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTAGATAGACCCTTCCTATGTTAGGGCTATTTTTTCAGAATGTG  472

seq1  TCTTTTAATCTATTAATATGTTGTGAGCTATTAGCTATTCTTCCAAGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAATCTATTAATATGTTGTGAGCTATTAGCTATTCTTCCAAGAAA  522

seq1  GGGTTTGTTTATCAAATAAATTTTAATGTTTCTGTGTGTGTATGGAATAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGTTTATCAAATAAATTTTAATGTTTCTGTGTGTGTATGGAATAC  572

seq1  ACATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGGAGAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGGAGAGAG  622

seq1  AGAGAAATGAACCCAGGGACCTGAACATGCTATATAGATGCCCTTCAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGAACCCAGGGACCTGAACATGCTATATAGATGCCCTTCAAAA  672

seq1  ACTTAGTACTGTACTCTTGAGTTATCAGAGAACACCTGAACTTAGTAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTACTGTACTCTTGAGTTATCAGAGAACACCTGAACTTAGTAAAA  722

seq1  TCTATAAGTACTAAAGGAAAAAAATCTTTAACTATGTTTAGATTTAGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAGTACTAAAGGAAAAAAATCTTTAACTATGTTTAGATTTAGATT  772

seq1  CCTTCAGTAATTTGACCAGTTGCCTTTTTCTTCCTCTATAAATGGTTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGTAATTTGACCAGTTGCCTTTTTCTTCCTCTATAAATGGTTGTC  822

seq1  AGTGTCATTATAGAAAATCAGTGTTCTACAAATCAATTTGGGAAACATTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATTATAGAAAATCAGTGTTCTACAAATCAATTTGGGAAACATTG  872

seq1  CTCTGTTTATTGAAACAGAGATAGATGTGTGTGGATTACTTAAATATTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTATTGAAACAGAGATAGATGTGTGTGGATTACTTAAATATTCT  922

seq1  CAGTTCTAGCTCACAATAATTTTAAAAATAATCTCCCAAAAGAAATAGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTAGCTCACAATAATTTTAAAAATAATCTCCCAAAAGAAATAGAG  972

seq1  AAACGTTTAGTCTTTTAAAGAAAATTCATAATTGTTATGATGCCCATTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTTTAGTCTTTTAAAGAAAATTCATAATTGTTATGATGCCCATTTT  1022

seq1  AGGAGCCATTGTAATATCAATCATGGCAGTTGTATATGGAATTCTTCCTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCATTGTAATATCAATCATGGCAGTTGTATATGGAATTCTTCCTA  1072

seq1  ACAACCACTGTCAAATGCAGTAGTGGTTAGTAGGGATTATTCCAAATCAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACTGTCAAATGCAGTAGTGGTTAGTAGGGATTATTCCAAATCAC  1122

seq1  TACATCTGTGCTTTAAAGTGCTACAAATTTTTGAGGAAATTTTGTTTTTA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTGTGCTTTAAAGTGCTACAAATTTTTGAGGAAATTTTGTTTTTA  1172

seq1  AGTTTAGGCAGCATATTCTTTAATTCTGTGAATTC  1233
      |||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGCAGCATATTCTTTAATTCTGTGAATTC  1207

seq1: chr4_94136602_94137718
seq2: B6Ng01-159G19.g_65_1167

seq1  GAATTCCAACCAATAGCACACTGTGTTCAAACCTCTCTGCAGGTCAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACCAATAGCACACTGTGTTCAAACCTCTCTGCAGGTCAAGGA  50

seq1  CTGAAGAGAGCAAGAAATGAATATGAAAGGAAAGAACAAAGAAGAAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGAGCAAGAAATGAATATGAAAGGAAAGAACAAAGAAGAAGCAC  100

seq1  CCAGAGGACTCTACTGGAACAGGATACAGGGACGAGTGCTTGTTATGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGACTCTACTGGAACAGGATACAGGGACGAGTGCTTGTTATGAGG  150

seq1  AGCCAGTGGGATGGGCTCTTTGTGGTAGGTAACAGTTGATCATTAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGGGATGGGCTCTTTGTGGTAGGTAACAGTTGATCATTAAAACA  200

seq1  TTAAAAGGCGTTCAAAGCATGAATGGTCTGGAATCCATGTAAGACTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGCGTTCAAAGCATGAATGGTCTGGAATCCATGTAAGACTACCT  250

seq1  CTTCTTGTCTATTTAATGAAATGAAAGGGGGAGTCTAAAGACAGTAAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTCTATTTAATGAAATGAAAGGGGGAGTCTAAAGACAGTAAGTC  300

seq1  CCAGAACCATGGCTAGGTCTATGACAAAGCTGTACCTATACCAGGGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCATGGCTAGGTCTATGACAAAGCTGTACCTATACCAGGGCCCT  350

seq1  TGTCATACTTCACTGTCCTCTGCCCACATGACTGTCCCATTCTCTCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATACTTCACTGTCCTCTGCCCACATGACTGTCCCATTCTCTCATCA  400

seq1  TCACCAAGCCAATGGTTGTTCCCACATTTATGGAGCAACTTTCTGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGCCAATGGTTGTTCCCACATTTATGGAGCAACTTTCTGTGTCT  450

seq1  TAAAACACACTATGAAACATAAACACAATGTTTTTTACATCAAAAGCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACACTATGAAACATAAACACAATGTTTTTTACATCAAAAGCTCC  500

seq1  CTTTGACTTCAAGATCTTTTGCTGCATGCTAACAGAAGAAAGTGCATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTTCAAGATCTTTTGCTGCATGCTAACAGAAGAAAGTGCATTGA  550

seq1  GCATTTGTTCAGCAAATGCCCCATCAGTGCCTACTATGTGTCAGGTACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTTCAGCAAATGCCCCATCAGTGCCTACTATGTGTCAGGTACAC  600

seq1  AAAAACAAATAGTACAGATGATCTCATCAAGAAGCCTGTGAATACACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAATAGTACAGATGATCTCATCAAGAAGCCTGTGAATACACTTA  650

seq1  GCTATGTAGAGCACATCTGCGAATCCGTATGATCCAGTAAATACACTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTAGAGCACATCTGCGAATCCGTATGATCCAGTAAATACACTTTG  700

seq1  TTCAGAGTGTCTTGGAAACAAAGAGGCTAGATCTTAACTGGCCTACACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTGTCTTGGAAACAAAGAGGCTAGATCTTAACTGGCCTACACAG  750

seq1  TGAGAGGGGAAGAGAAAGCCTCACTGAGAGCTGAGACTGGAGAAGACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGGAAGAGAAAGCCTCACTGAGAGCTGAGACTGGAGAAGACCCC  800

seq1  GAGGAAAACTACTGATCGACAGACAGGCGAAAGACCACATTCTTCTCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAACTACTGATCGACAGACAGGCGAAAGACCACATTCTTCTCTGC  850

seq1  TATTCGGTTGCCTGAGCCTATTAGACTATTCAAATAGTAGAAAGGCCCAG  900
      || ||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  TA-TCGGTTGCCTGAGCCTATTAGACTATTCAAATAGTAG-AAGGGCCAG  898

seq1  GTACCT-GTGATTATTAATTTTGGAGAGGAACAGAGGCATACTGAACCTT  949
      |||||| ||||||| ||||||| ||||||||||||||||||||| |||||
seq2  GTACCTGGTGATTAATAATTTT-GAGAGGAACAGAGGCATACTG-ACCTT  946

seq1  GCTATTGATAGATGTGTAGAATATGTTAATCGTAATGCT-CATTAGTCAG  998
      |||| |||||||||  ||||||||||| |||| |||||| ||||||||||
seq2  GCTA-TGATAGATGGTTAGAATATGTT-ATCGGAATGCTCCATTAGTCAG  994

seq1  CTAAGTTACTA-TTTTCTCAGATGATTTTTCTCCACTGATCATTTTTTAT  1047
      ||||| ||||| ||||||| |  ||||||| ||||| | ||| |||||||
seq2  CTAAG-TACTATTTTTCTCCGGAGATTTTTTTCCACGGGTCA-TTTTTAT  1042

seq1  ATTTAGCCATTTTTCATCTCCAATGAAATAT-ACTTGTTCCTTAGAGGAG  1096
      ||  || ||||||||| |||| |||| | || || ||||||||    |||
seq2  ATAGAG-CATTTTTCA-CTCCCATGAGAAATAACCTGTTCCTT----GAG  1086

seq1  GGAAGAGAGGAGAGAATGAAC  1117
      |   |||||||||| ||||||
seq2  G---GAGAGGAGAG-ATGAAC  1103