BAC Information

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BAC

Clone NameB6Ng01-159I13
Chromosome4 (Build37)
Map Location 118,627,339 - 118,628,312
singlet/doubletsinglet
Overlap genenone
Upstream geneSt3gal3, Jmjd2a, Ptprf, Hyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519
Downstream geneLao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159I13.g
ACCDH953174
length968
definitionDH953174|Mus musculus domesticus DNA, BAC clone: B6Ng01-159I13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtaagtaattatttgaggacggaagaaggaaagaaggagag
agggttgactgaccttgtgtccagctggaaaagaagagcaggcgatgagg
gaaaagactacaggagtgtgaggatgtatacagggggaaaaaattacata
atgtcctggttacgtctgagcacaagcctcacagacacctggagcttgcc
aacaacctaaagatgagaagccacctcgtacctagtgggtccacaggact
gttactgccggctcttagcaggaaaggatcaggaagcccataggcagctg
agtgcagagagttagcattccaggaagctccttccccagaacaaccccaa
ggtttctgagagtttgggaactgagccctctgacttcctccatggaacaa
gccagcactgcccctgaaggcattgcccaaaggattctgggctgcagacg
aaaggagactcagccatctcagcctcctccagcaggacaagctgctaagg
ttttacacccctgcctctgcccacccctaccaatgcctgccccgtgccaa
gacagagttctccaaatttgttcaacaagaacactaaaaaaagaggtctc
tggggacagagaataagaccccaagccacagagggaggggcagtgacata
tttccttttccagcctgcttgaggggataagagcaaactgagagcagagg
agatgagacctgaacactggtagacaccctgataacttaaacctatattc
ggatctctcttatagtgcctaagcccctgaccctaaacatgttcatttga
ccatagctgagtcaaactttaagcaaatcaagtcctcattctccaactat
aaaatgcctatgcaggtacccagtctctcctgtgatgattaagagtctgc
caactttatgccaagtcttgaatcggattctggcagagaaatctggaggt
cctagtgctcgcccatga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_118627339_118628312
seq2: B6Ng01-159I13.g_70_1037

seq1  GAATTCTCAGTAAGTAATTATTTGAGGACGGAAGAAGGAAAGAAGGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTAAGTAATTATTTGAGGACGGAAGAAGGAAAGAAGGAGAG  50

seq1  AGGGTTGACTGACCTTGTGTCCAGCTGGAAAAGAAGAGCAGGCGATGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGACTGACCTTGTGTCCAGCTGGAAAAGAAGAGCAGGCGATGAGG  100

seq1  GAAAAGACTACAGGAGTGTGAGGATGTATACAGGGGGAAAAAATTACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACTACAGGAGTGTGAGGATGTATACAGGGGGAAAAAATTACATA  150

seq1  ATGTCCTGGTTACGTCTGAGCACAAGCCTCACAGACACCTGGAGCTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGGTTACGTCTGAGCACAAGCCTCACAGACACCTGGAGCTTGCC  200

seq1  AACAACCTAAAGATGAGAAGCCACCTCGTACCTAGTGGGTCCACAGGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCTAAAGATGAGAAGCCACCTCGTACCTAGTGGGTCCACAGGACT  250

seq1  GTTACTGCCGGCTCTTAGCAGGAAAGGATCAGGAAGCCCATAGGCAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGCCGGCTCTTAGCAGGAAAGGATCAGGAAGCCCATAGGCAGCTG  300

seq1  AGTGCAGAGAGTTAGCATTCCAGGAAGCTCCTTCCCCAGAACAACCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGAGAGTTAGCATTCCAGGAAGCTCCTTCCCCAGAACAACCCCAA  350

seq1  GGTTTCTGAGAGTTTGGGAACTGAGCCCTCTGACTTCCTCCATGGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTGAGAGTTTGGGAACTGAGCCCTCTGACTTCCTCCATGGAACAA  400

seq1  GCCAGCACTGCCCCTGAAGGCATTGCCCAAAGGATTCTGGGCTGCAGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCACTGCCCCTGAAGGCATTGCCCAAAGGATTCTGGGCTGCAGACG  450

seq1  AAAGGAGACTCAGCCATCTCAGCCTCCTCCAGCAGGACAAGCTGCTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGACTCAGCCATCTCAGCCTCCTCCAGCAGGACAAGCTGCTAAGG  500

seq1  TTTTACACCCCTGCCTCTGCCCACCCCTACCAATGCCTGCCCCGTGCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACACCCCTGCCTCTGCCCACCCCTACCAATGCCTGCCCCGTGCCAA  550

seq1  GACAGAGTTCTCCAAATTTGTTCAACAAGAACACT-AAAAAAGAGGTCTC  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACAGAGTTCTCCAAATTTGTTCAACAAGAACACTAAAAAAAGAGGTCTC  600

seq1  TGGGGACAGAGAATAAGAACCCAAGCCACAGAGGGAGGGGCAGTGACATA  649
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGGGGACAGAGAATAAGACCCCAAGCCACAGAGGGAGGGGCAGTGACATA  650

seq1  TTTCCTTTTCCAGCCTGCTTGA-GGGATAAGAGC-AACTGAGAGCAGAGG  697
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TTTCCTTTTCCAGCCTGCTTGAGGGGATAAGAGCAAACTGAGAGCAGAGG  700

seq1  AGATGAGACCTGAACACTGGTAGACACCCTGATAACTTAAACCTATATTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGACCTGAACACTGGTAGACACCCTGATAACTTAAACCTATATTC  750

seq1  GGATCTCTCTTATAGTGCCTAAGCCCCTGACCCCTAAACATGTCAATTTG  797
      |||||||||||||||||||||||||||||| ||||||||||||  |||||
seq2  GGATCTCTCTTATAGTGCCTAAGCCCCTGA-CCCTAAACATGTTCATTTG  799

seq1  ACCATAGCTGAGTCAAACTTTTAAGCAAATCAAAGTCCTCCATTCTCCAC  847
      |||||||||||||||||| |||||||||||| ||||||| ||||||||| 
seq2  ACCATAGCTGAGTCAAAC-TTTAAGCAAATC-AAGTCCT-CATTCTCCAA  846

seq1  CTATAAAATGCCTATGCAGGTTACCCAGTCTCTCCTGTGATGATTAAGAG  897
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTATAAAATGCCTATGCAGG-TACCCAGTCTCTCCTGTGATGATTAAGAG  895

seq1  TCTGCCAACTTTATGCCAAGTCTTGAATCGGATTCTGGCAAGAGACATCT  947
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  TCTGCCAACTTTATGCCAAGTCTTGAATCGGATTCTGGC-AGAGAAATCT  944

seq1  GGAGGTCCTCAGTGGCTCGCCCCATGA  974
      ||||||||| ||| ||||| |||||||
seq2  GGAGGTCCT-AGT-GCTCG-CCCATGA  968