BAC Information

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BAC

Clone NameB6Ng01-159O04
Chromosome4 (Build37)
Map Location 44,421,365 - 44,421,600
singlet/doubletsinglet
Overlap genenone
Upstream geneRusc2, 4833436C18Rik, Tesk1, Cd72, Sit1, Rmrp, LOC622404, E130306D19Rik, Car9, Tpm2, Tln1, Creb3, Gba2, 1110029E03Rik, LOC100039672, LOC100040179, Npr2, Spag8, Hint2, Serf2-ps, 4930412F15Rik, Olfr70, Olfr71, LOC100039781, 5430416O09Rik, A630077J23Rik, GA_x5J8B7W5BNN-892919-892147, Olfr159, Olfr29-ps1, Olfr156, LOC100040268, Olfr155, Reck, Glipr2, Ccin, Clta, Gne, LOC100040313, OTTMUSG00000007209, Rnf38, Melk
Downstream genePax5, 5730488B01Rik, LOC545618, Zcchc7, D4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik, Frmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159O04.bB6Ng01-159O04.g
ACCDH953418DH953419
length1,211236
definitionDH953418|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O04, 5' end.DH953419|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttccgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttttgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatatgttcttggattcggttagcaagaatgttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttttctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
gattagatcttctttgaaggtctggtagaactctgcactaaacccatctg
gtcctgggctttttttttggttgggagactattaatgactgcttctattt
ccttgggggatatgggactgcttagatcgttaacttgatcctgatttaac
tttggtacctggtatctgtctagaaatttgtccatttcatccaggttttc
cagttttgttgagtatagccttttgtagaaggatctgatggtgttttgga
tttcttcaggatctgttgttatgtctcccttttcatttctgattttgtta
attaggatgttgtccctgtgccctctagtgagtctagctaagggtttatc
tatcttgttgattttctcaaagaaccaactccttgtttggttaattcttt
gaatagttcttcttgtttccacttggctgatttcacccctgagtttgatt
atttcctgccatctactcctcttgggtgaatttgcttcctttttttctag
agcttttagatgtgttgtcaagctgctagtatgtgctctcttccatttct
tcttggaggcacctcagagctatgagtttcctcttaaatgctttcatgtg
tcccataggtttgggaagttgtggtttcaatttcataactctaaagtctt
aattctttcttaattcctccctggacaaggacacctggaagagagttggt
cagttccacggaagtgtggctttcataatatgtggtattgaagcagccct
taggcatgggggctgaagagaacaggacatttcaaattgtattcgtgtga
gcgcgatgtac
actctgtagaccaggctggcctcgtactcatagagatccacctgcctctg
cctcctgtcctgagtgctgggattaagggcgggggccttattaaattaaa
ttaaattaaattatttttattgggttacttttcttctaaaagctttaaag
ggcatggtggtgcacccttgtaatcccagaatattgaagacagaaggcat
ctggggctacagagcatgagagaaagggggaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_44421365_44421600
seq2: B6Ng01-159O04.g_73_308

seq1  ACTCTGTAGACCAGGCTGGCCTCGTACTCATAGAGATCCACCTGCCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCTCGTACTCATAGAGATCCACCTGCCTCTG  50

seq1  CCTCCTGTCCTGAGTGCTGGGATTAAGGGCGGGGGCCTTATTAAATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTCCTGAGTGCTGGGATTAAGGGCGGGGGCCTTATTAAATTAAA  100

seq1  TTAAATTAAATTATTTTTATTGGGTTACTTTTCTTCTAAAAGCTTTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAAATTATTTTTATTGGGTTACTTTTCTTCTAAAAGCTTTAAAG  150

seq1  GGCATGGTGGTGCACCCTTGTAATCCCAGAATATTGAAGACAGAAGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTGGTGCACCCTTGTAATCCCAGAATATTGAAGACAGAAGGCAT  200

seq1  CTGGGGCTACAGAGCATGAGAGAAAGGGGGAGGAAG  236
      ||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTACAGAGCATGAGAGAAAGGGGGAGGAAG  236