BAC Information

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BAC

Clone NameB6Ng01-160L10
Chromosome4 (Build37)
Map Location 128,201,685 - 128,353,948
singlet/doubletdoublet
Overlap geneZscan20, Tlr12
Upstream geneLOC635169, 4930465A12Rik, Hmgb4, 4930546G22Rik
Downstream genePhc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080, Sync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160L10.bB6Ng01-160L10.g
ACCDH954017DH954018
length885977
definitionDH954017|Mus musculus domesticus DNA, BAC clone: B6Ng01-160L10, 5' end.DH954018|Mus musculus domesticus DNA, BAC clone: B6Ng01-160L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,353,281 - 128,353,948)(128,201,685 - 128,202,656)
sequence
gaattcattaacacagagaggttgaaaaatgttgactaaagtcacattta
caattagtaattgggaaagtcaagagttcaagtcaggaaacttctaaaga
agtctggcctagagacctcctcttaaccaataatgtatagtaacttaaag
actgatatgctattattcacaatgaaatcttttcacacagcacaaaacag
acaaaaccaaaagtcacagggttaagtaaaataatccagaaagacaaatg
ctacgtgttctcagccatatgaaaagcgaaaaaccttaatgtcaagtaag
aaggctggaggctgggaaagactggagtaagaaatatagaattgggataa
taattctaaaattaggagcccttaagttctagtgatctatatacaatatg
taattatagtttacaacagcctatgattattttatgaagaattagaagag
aggagtttgaaggctctgtcttaacttacttttctatttctatgacaaaa
caccatgaccaaggcagcttataaaagaaagcacttaattaggctcacaa
tttcaaagggtgagagtccatgatagtgggccaaaggcttagaagcaggg
gtagctgagagctcacatctttatccgttaagtaggaggtatagagagag
ggcacactgggaatggtgtgagtctttcgaaagtgcaaagctgctcccac
aagagacacaccttatccaagaaggctacacctcctaatcctttcaaaca
gttccatcaactgggactaagtattcaaatgtatgagcccatgaggacaa
ataaaacgaccacaggccccaaacacaaagattgaaatgttatttccttg
gtctgatcatttcacactatataaaatgagtgccc
gaattccaacttccacacttttccccagtaggcctttgacaatccctgaa
tagcagagacatctattaaattgcactcgcgcatgctgtcttaattaggg
ttccattgctgtaaagggtcaccgtgaccaaggcaactcttaacagagga
caacatttaaatggggctgtcctacaggttcagaagttcagtccattatc
atcatggctggaaacatggcagcatccaggcaggcatggtgctggagaag
gggctgagagttctatgtcttgatccacagggaaggaactgtcttctgaa
ggcagccaggaggagggtcccttcctcactagctggagcttgagcactag
gagccctcggaagcccgcctacacggtgacacacttcctccaacaaggcc
acgcttcctcattgcaccacttcctatgggccaagtacattcaaacccca
cacatgccaacatgaaaatcttcctgttcatagattaaagtcactcatgt
agggggatatgccttacatgttccatcctaattctcttatgctctctgtc
attacgctgtgttgttctctttggtgttgatgttttcacttatcacactg
taaggctgtcaggtccctggtttttgttttttttttctattcaaatcttt
tattatctagttgaccaacactagaatccatgaaactttcacataaaggc
tacactgcatgttcctctttcccatttctattcctggtggcatttctccc
actctgtcagggctgagaccatgtagcatgggagttcatatgtcgtaatt
ctattccttgcccccacctttgctttgttcttgaacctacaataaaattc
atcatcaaccactgctgaagcaccccattagttctttagtagggccaata
taatcttttagtagtcagtacaacttctttgcatagtattctcaagtttc
ctccagggttggtggtggtggcagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128353281_128353948
seq2: B6Ng01-160L10.b_28_696 (reverse)

seq1  ACACCATTCCCAGTGTGCCCTCTCTCTATACCTCCTACTTAACGGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTCCCAGTGTGCCCTCTCTCTATACCTCCTACTTAACGGATAAA  50

seq1  GATGTGAGCTCTCAGCTACCCCTGCTTCTAAGCCTTTGGCCCACTATCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAGCTCTCAGCTACCCCTGCTTCTAAGCCTTTGGCCCACTATCAT  100

seq1  GGACTCTCACCCTTTGAAATTGTGAGCCTAATTAAGTGCTTTCTTTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTCACCCTTTGAAATTGTGAGCCTAATTAAGTGCTTTCTTTTATA  150

seq1  AGCTGCCTTGGTCATGGTGTTTTGTCATAGAAATAGAAAAGTAAGTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCTTGGTCATGGTGTTTTGTCATAGAAATAGAAAAGTAAGTTAAG  200

seq1  ACAGAGCCTTCAAACTCCTCTCTTCTAATTCTTCATAAAATAATCATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTTCAAACTCCTCTCTTCTAATTCTTCATAAAATAATCATAGG  250

seq1  CTGTTGTAAACTATAATTACATATTGTATATAGATCACTAGAACTTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTAAACTATAATTACATATTGTATATAGATCACTAGAACTTAAGG  300

seq1  GCTCCTAATTTTAGAATTATTATCCCAATTCTATATTTCTTACTCCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAATTTTAGAATTATTATCCCAATTCTATATTTCTTACTCCAGTC  350

seq1  TTTCCCAGCCTCCAGCCTTCTTACTTGACATTAAGGTTTTTCGCTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGCCTCCAGCCTTCTTACTTGACATTAAGGTTTTTCGCTTTTCA  400

seq1  TATGGCTGAGAACACGTAGCATTTGTCTTTCTGGATTATTTTACTTAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTGAGAACACGTAGCATTTGTCTTTCTGGATTATTTTACTTAACC  450

seq1  CTGTGACTTTTGGTTTTGTCTGTTTTGTGCTGTGTGAAAAGATTTCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTTTTGGTTTTGTCTGTTTTGTGCTGTGTGAAAAGATTTCATTG  500

seq1  TGAATAATAGCATATCAGTCTTTAAGTTACTATACATTATTGGTTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATAGCATATCAGTCTTTAAGTTACTATACATTATTGGTTAAGAG  550

seq1  GAGGTCTCTAGGCCAGACTTCTTTAGAAGTTTCCTGACTTGAACTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCTAGGCCAGACTTCTTTAGAAGTTTCCTGACTTGAACTCTTGA  600

seq1  CTTTCCCAATTACTAATTGTAAATGTGACTTTAGTC-ACATTTTTCAACC  649
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTTTCCCAATTACTAATTGTAAATGTGACTTTAGTCAACATTTTTCAACC  650

seq1  TCTCTGTGTTAATGAATTC  668
      |||||||||||||||||||
seq2  TCTCTGTGTTAATGAATTC  669

seq1: chr4_128201685_128202656
seq2: B6Ng01-160L10.g_69_1045

seq1  GAATTCCAACTTCCACACTTTTCCCCAGTAGGCCTTTGACAATCCCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTTCCACACTTTTCCCCAGTAGGCCTTTGACAATCCCTGAA  50

seq1  TAGCAGAGACATCTATTAAATTGCACTCGCGCATGCTGTCTTAATTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGACATCTATTAAATTGCACTCGCGCATGCTGTCTTAATTAGGG  100

seq1  TTCCATTGCTGTAAAGGGTCACCGTGACCAAGGCAACTCTTAACAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGCTGTAAAGGGTCACCGTGACCAAGGCAACTCTTAACAGAGGA  150

seq1  CAACATTTAAATGGGGCTGTCCTACAGGTTCAGAAGTTCAGTCCATTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTAAATGGGGCTGTCCTACAGGTTCAGAAGTTCAGTCCATTATC  200

seq1  ATCATGGCTGGAAACATGGCAGCATCCAGGCAGGCATGGTGCTGGAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGCTGGAAACATGGCAGCATCCAGGCAGGCATGGTGCTGGAGAAG  250

seq1  GGGCTGAGAGTTCTATGTCTTGATCCACAGGGAAGGAACTGTCTTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAGAGTTCTATGTCTTGATCCACAGGGAAGGAACTGTCTTCTGAA  300

seq1  GGCAGCCAGGAGGAGGGTCCCTTCCTCACTAGCTGGAGCTTGAGCACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCAGGAGGAGGGTCCCTTCCTCACTAGCTGGAGCTTGAGCACTAG  350

seq1  GAGCCCTCGGAAGCCCGCCTACACGGTGACACACTTCCTCCAACAAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTCGGAAGCCCGCCTACACGGTGACACACTTCCTCCAACAAGGCC  400

seq1  ACGCTTCCTCATTGCACCACTTCCTATGGGCCAAGTACATTCAAACCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTCCTCATTGCACCACTTCCTATGGGCCAAGTACATTCAAACCCCA  450

seq1  CACATGCCAACATGAAAATCTTCCTGTTCATAGATTAAAGTCACTCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCCAACATGAAAATCTTCCTGTTCATAGATTAAAGTCACTCATGT  500

seq1  AGGGGGATATGCCTTACATGTTCCATCCTAATTCTCTTATGCTCTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGATATGCCTTACATGTTCCATCCTAATTCTCTTATGCTCTCTGTC  550

seq1  ATTACGCTGTGTTGTTCTCTTTGGTGTTGATGTTTTCACTTATCACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGCTGTGTTGTTCTCTTTGGTGTTGATGTTTTCACTTATCACACTG  600

seq1  TAAGGCTGTCAGGTCCCTGGTTTTTGTTTTTTTTTTCTATTCAAATC-TT  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAGGCTGTCAGGTCCCTGGTTTTTGTTTTTTTTTTCTATTCAAATCTTT  650

seq1  TATTATCTAGTTGACCAACACTAGAATCCATG-AACTTTCACATAAAGGC  698
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATTATCTAGTTGACCAACACTAGAATCCATGAAACTTTCACATAAAGGC  700

seq1  TACACTGCATGTTCCTCTTTCCCATTTCTATTCCTGGTGGCATTTCTCCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGCATGTTCCTCTTTCCCATTTCTATTCCTGGTGGCATTTCTCCC  750

seq1  ACTCTGTCAGGGCTGAGACCATGTAGCAT-GGAGTTCATATGTCGTAATT  797
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACTCTGTCAGGGCTGAGACCATGTAGCATGGGAGTTCATATGTCGTAATT  800

seq1  CTATTCCTTGCCCCCACCTTTGCTTTGTTCTTGAACCTACAATTAAATTC  847
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTATTCCTTGCCCCCACCTTTGCTTTGTTCTTGAACCTACAATAAAATTC  850

seq1  ATCATCAA-CACTGCTGAAGCACCCCAGTTAGTTC-TTAGTAGGGTCAAG  895
      |||||||| |||||||||||||||||| ||||||| ||||||||| ||| 
seq2  ATCATCAACCACTGCTGAAGCACCCCA-TTAGTTCTTTAGTAGGGCCAA-  898

seq1  TATAGTC-TTTAGTAGTCAGTACAAC-TCTTTGCATAGTATTCTTCAAG-  942
      |||| || |||||||||||||||||| |||||||||||||||| ||||| 
seq2  TATAATCTTTTAGTAGTCAGTACAACTTCTTTGCATAGTATTC-TCAAGT  947

seq1  TTCCTCCATGGGTGGTGGTGGTGGCAGTGG  972
      |||||||| || ||||||||||||||||||
seq2  TTCCTCCAGGGTTGGTGGTGGTGGCAGTGG  977