BAC Information

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BAC

Clone NameB6Ng01-160N07
Chromosome4 (Build37)
Map Location 125,433,341 - 125,550,061
singlet/doubletdoublet
Overlap genenone
Upstream geneInpp5b, LOC100039433, Mtf1, Yrdc, Gm50, Epha10, Cdca8, 9930104L06Rik, Rspo1, Gnl2, Dnali1, Snip1, 2310005N01Rik, Zc3h12a, LOC100039298, Grik3, Ftl2
Downstream geneCsf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160N07.bB6Ng01-160N07.g
ACCDH954102DH954103
length1,107912
definitionDH954102|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N07, 5' end.DH954103|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,433,341 - 125,434,453)(125,549,147 - 125,550,061)
sequence
gaattcctttgcaagcaactgtagagtggtgttcacattccaatattcaa
tctcctcattcctccaagtgttgtgggtacctacgactgtagcacaagta
gtaggttacctactagtattggtaacctactactcatagcacaagacctt
cagaaattaatactcaaaaccaccacacccaaagctagccccactccatc
acatccgatgagatacaggacagtactgtaaggtagggtgaccagtttat
atcagtttttccagtaatttctcattctaagcacctaaagccctgggatg
cccttggtgctgggcaaactaggatattcaatcacatgattcctggtgtc
acaacccagctgctcctgtgggctgaggcttttgctaaagtcacaccacc
gctaaaggatttctctgcccagttctgcctcgctccccactccactgtct
gggatgagttcatctgagaaggcatcttcctgggactcccactcaagtct
gcacatcctccatgccatgtgctgtgccagcctgtgttctgctctgctca
gtccccatcagaagccctggaagagggtaacaccgtccccaagaacagca
aggctcacagacacagggctcaagtccagcccttaacgcaggcacacaga
cattctgacgcccttgctagtaaattttcctcctctgtactttctccaac
tcttctttatctctcttgaaaataagccaaagcatttggggattaaatat
ctctcctctctggactctttgcctgtaataggcaagaaaatgtaagcatt
tgctcctggcatccagaggtgagcgaaagtgtctacctggtctgctggca
gaggaaggatggagagagttcagaaggcagctgcaggctggttgacttct
tactttcgaggctacggtaaactcagatcctttgccatgaccccccaaat
tagattactttttcttgggagggagagagtaagcaagctagctccctgat
ttcacccacagtcataatgagagcagctcggtgtggacttgcacctaatt
ctcatttggcctaaaattccagagccagctgttcctcagaagaagcagat
gtccttc
gaattcaggcccctaggagcctcctggaaggtagccctaagatcagagct
tctacttgggtgtggtggtggcacctgcaatcccagcaccccagacatgg
aggcaggggaatcctgagctcaagggcagcttgggccataccacaaagca
ctgcttcagaacacacaaaacccaacatgaaacctatcagccctcctcaa
gcttctcttgaatttccttgtcttcacagttagatttttctcggttttca
agggtctgggcactgtcagggtgtttggcgtttccatgggaccataccga
tttctgcctaccatcttgccctcccaccccaagaaatctttcatgattga
gtccttgataatagtctgtctgtctgtctaccacatcatcaaagagtgcc
ttcatcctatttcttcaattgtctcctatatggggctgaatgcatcccct
ctgaccaaagccataggctgatgtggcccccactggctcctcagaatgcg
acagggtttggagacagcgttttgataattaagtgacatttgcttcttgt
ttgtttgcctttttgaagcagggtctagctatgtagtcctggctgtcttg
gaatgccctgtgtaaaccagactggcattgaactcacggagatctgccta
cctctgcctcatatgtgctgcgattaaaggcacgtgctacccaacctgaa
aagcagttcttaggataggccctaatccaagatggcggcttcatatggaa
agtgtagagggttgggaatagggttcgtcagtagaatgtttgcctaatgt
gcagaagtgctagtttcaatcagaaaaagtagggaaagaaataaggcaga
aggcagaaaggaaaaaaaaaacagagtaggaagcaagaagggagggaggg
atggagggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_125433341_125434453
seq2: B6Ng01-160N07.b_44_1150

seq1  GAATTCCTTTGCAAGCAACTGTAGAGTGGTGTTCACATTCCAATATTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGCAAGCAACTGTAGAGTGGTGTTCACATTCCAATATTCAA  50

seq1  TCTCCTCATTCCTCCAAGTGTTGTGGGTACCTACGACTGTAGCACAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCATTCCTCCAAGTGTTGTGGGTACCTACGACTGTAGCACAAGTA  100

seq1  GTAGGTTACCTACTAGTATTGGTAACCTACTACTCATAGCACAAGACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTACCTACTAGTATTGGTAACCTACTACTCATAGCACAAGACCTT  150

seq1  CAGAAATTAATACTCAAAACCACCACACCCAAAGCTAGCCCCACTCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTAATACTCAAAACCACCACACCCAAAGCTAGCCCCACTCCATC  200

seq1  ACATCCGATGAGATACAGGACAGTACTGTAAGGTAGGGTGACCAGTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCGATGAGATACAGGACAGTACTGTAAGGTAGGGTGACCAGTTTAT  250

seq1  ATCAGTTTTTCCAGTAATTTCTCATTCTAAGCACCTAAAGCCCTGGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTTTCCAGTAATTTCTCATTCTAAGCACCTAAAGCCCTGGGATG  300

seq1  CCCTTGGTGCTGGGCAAACTAGGATATTCAATCACATGATTCCTGGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTGCTGGGCAAACTAGGATATTCAATCACATGATTCCTGGTGTC  350

seq1  ACAACCCAGCTGCTCCTGTGGGCTGAGGCTTTTGCTAAAGTCACACCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCAGCTGCTCCTGTGGGCTGAGGCTTTTGCTAAAGTCACACCACC  400

seq1  GCTAAAGGATTTCTCTGCCCAGTTCTGCCTCGCTCCCCACTCCACTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGGATTTCTCTGCCCAGTTCTGCCTCGCTCCCCACTCCACTGTCT  450

seq1  GGGATGAGTTCATCTGAGAAGGCATCTTCCTGGGACTCCCACTCAAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGTTCATCTGAGAAGGCATCTTCCTGGGACTCCCACTCAAGTCT  500

seq1  GCACATCCTCCATGCCATGTGCTGTGCCAGCCTGTGTTCTGCTCTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCCTCCATGCCATGTGCTGTGCCAGCCTGTGTTCTGCTCTGCTCA  550

seq1  GTCCCCATCAGAAGCCCTGGAAGAGGGTAACACCGTCCCCAAGAACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCATCAGAAGCCCTGGAAGAGGGTAACACCGTCCCCAAGAACAGCA  600

seq1  AGGCTCACAGACACAGGGCTCAAGTCCAGCCCTTAACGCAGGCACACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACAGACACAGGGCTCAAGTCCAGCCCTTAACGCAGGCACACAGA  650

seq1  CATTCTGACGCCCTTGCTAGTAAATTTTCCTCCTCTGTACTTTCTCCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGACGCCCTTGCTAGTAAATTTTCCTCCTCTGTACTTTCTCCAAC  700

seq1  TCTTCTTTATCTCTCTTGAAAATAAGCCAAAGCATTTGGGGATTAAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTATCTCTCTTGAAAATAAGCCAAAGCATTTGGGGATTAAATAT  750

seq1  CTCTCCTCTCTGGACTCTTTGCCTGTAATAGGCAAGAAAATGTAAGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCTCTGGACTCTTTGCCTGTAATAGGCAAGAAAATGTAAGCATT  800

seq1  TGCTCCTGGCATCCAGAGGTGAGCGAAGGTGTCTACCTGGTCTGCTGGCA  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCTCCTGGCATCCAGAGGTGAGCGAAAGTGTCTACCTGGTCTGCTGGCA  850

seq1  GAGGAAGGATGGAGAGAGTTCAGAAGGCAGCTGCAGGCTGGTTGACTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGATGGAGAGAGTTCAGAAGGCAGCTGCAGGCTGGTTGACTTCT  900

seq1  TACTTTCGAGGCTACGGTAAACTCAGATCCTTTGCCATGACCCCCCAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCGAGGCTACGGTAAACTCAGATCCTTTGCCATGACCCCCCAAAT  950

seq1  TAGATTACTTTTTCTTGGGAGGGAGGAAGAGGTAAGCAAGCTAGCTCCCT  1000
      |||||||||||||||||||||||||  ||| |||||||||||||||||||
seq2  TAGATTACTTTTTCTTGGGAGGGAG--AGA-GTAAGCAAGCTAGCTCCCT  997

seq1  GATTTCACCCACAGTCATAATGAGGAGCAGCTC-GTGT-GACTTGCACCT  1048
      ||||||||||||||||||||||| ||||||||| |||| |||||||||||
seq2  GATTTCACCCACAGTCATAATGA-GAGCAGCTCGGTGTGGACTTGCACCT  1046

seq1  AATTCTCATTTGCCCCTAAAGATCCAGAGCCAGCTGTTCTCAAGAAGAAA  1098
      ||||||||||||  ||||||  |||||||||||||||||   ||||| ||
seq2  AATTCTCATTTG-GCCTAAAATTCCAGAGCCAGCTGTTCCTCAGAAG-AA  1094

seq1  GCAAGATGTCTCTTC  1113
      || ||||||| ||||
seq2  GC-AGATGTC-CTTC  1107

seq1: chr4_125549147_125550061
seq2: B6Ng01-160N07.g_67_978 (reverse)

seq1  TCTTCCCTCCATCCCTCCCTCCCTTCCTTGCTTCCTTCTCTGTTTTTTTT  50
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  TCTTCCCTCCATCCCTCCCTCCCTT-CTTGCTTCCTACTCTGTTTTTTTT  49

seq1  TTCCTTCTTGCCTTCCTGCCTTATTTCTTTCCCTACTTTTTCTGATTGAA  100
      ||||||  |||||| |||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTGCCTT-CTGCCTTATTTCTTTCCCTACTTTTTCTGATTGAA  98

seq1  ACTAGCACCTCCTGCACATTAGGCAAACATTCTACTGACGAACCCTATTC  150
      ||||||| || |||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCA-CTTCTGCACATTAGGCAAACATTCTACTGACGAACCCTATTC  147

seq1  CCAACCCTCTACACTTTCCATATGAAGCCGCCATCTTGGATTAGGGCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTCTACACTTTCCATATGAAGCCGCCATCTTGGATTAGGGCCTA  197

seq1  TCCTAAGAACTGCTTTTCAGGTTGGGTAGCACGTGCCTTTAATCGCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGAACTGCTTTTCAGGTTGGGTAGCACGTGCCTTTAATCGCAGCA  247

seq1  CATATGAGGCAGAGGTAGGCAGATCTCCGTGAGTTCAATGCCAGTCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAGGCAGAGGTAGGCAGATCTCCGTGAGTTCAATGCCAGTCTGGT  297

seq1  TTACACAGGGCATTCCAAGACAGCCAGGACTACATAGCTAGACCCTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAGGGCATTCCAAGACAGCCAGGACTACATAGCTAGACCCTGCTT  347

seq1  CAAAAAGGCAAACAAACAAGAAGCAAATGTCACTTAATTATCAAAACGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGCAAACAAACAAGAAGCAAATGTCACTTAATTATCAAAACGCT  397

seq1  GTCTCCAAACCCTGTCGCATTCTGAGGAGCCAGTGGGGGCCACATCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAAACCCTGTCGCATTCTGAGGAGCCAGTGGGGGCCACATCAGCC  447

seq1  TATGGCTTTGGTCAGAGGGGATGCATTCAGCCCCATATAGGAGACAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTTGGTCAGAGGGGATGCATTCAGCCCCATATAGGAGACAATTG  497

seq1  AAGAAATAGGATGAAGGCACTCTTTGATGATGTGGTAGACAGACAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAGGATGAAGGCACTCTTTGATGATGTGGTAGACAGACAGACAG  547

seq1  ACTATTATCAAGGACTCAATCATGAAAGATTTCTTGGGGTGGGAGGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTATCAAGGACTCAATCATGAAAGATTTCTTGGGGTGGGAGGGCAA  597

seq1  GATGGTAGGCAGAAATCGGTATGGTCCCATGGAAACGCCAAACACCCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAGGCAGAAATCGGTATGGTCCCATGGAAACGCCAAACACCCTGA  647

seq1  CAGTGCCCAGACCCTTGAAAACCGAGAAAAATCTAACTGTGAAGACAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCCAGACCCTTGAAAACCGAGAAAAATCTAACTGTGAAGACAAGG  697

seq1  AAATTCAAGAGAAGCTTGAGGAGGGCTGATAGGTTTCATGTTGGGTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAGAGAAGCTTGAGGAGGGCTGATAGGTTTCATGTTGGGTTTTG  747

seq1  TGTGTTCTGAAGCAGTGCTTTGTGGTATGGCCCAAGCTGCCCTTGAGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTGAAGCAGTGCTTTGTGGTATGGCCCAAGCTGCCCTTGAGCTC  797

seq1  AGGATTCCCCTGCCTCCATGTCTGGGGTGCTGGGATTGCAGGTGCCACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCCCCTGCCTCCATGTCTGGGGTGCTGGGATTGCAGGTGCCACCA  847

seq1  CCACACCCAAGTAGAAGCTCTGATCTTAGGGCTACCTTCCAGGAGGCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCAAGTAGAAGCTCTGATCTTAGGGCTACCTTCCAGGAGGCTCC  897

seq1  TAGGGGCCTGAATTC  915
      |||||||||||||||
seq2  TAGGGGCCTGAATTC  912