BAC Information

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BAC

Clone NameB6Ng01-161F01
Chromosome4 (Build37)
Map Location 85,013,936 - 85,014,587
singlet/doubletsinglet
Overlap geneSh3gl2
Upstream geneBnc2, LOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811, LOC100040303
Downstream geneA930009N24, LOC668052, Adamtsl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161F01.b
ACCDH954460
length652
definitionDH954460|Mus musculus domesticus DNA, BAC clone: B6Ng01-161F01, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatacacaatgtactctgcctagatcttctgaacactcccaca
atgaacaacacattttgaatgcaaaagtaggcagtgtccaccagtgaatc
cacatgggactgatccctaaagggacattcaattttaaattgttcttcat
tgaatattcccataggatataggatgctactaaatttaatgcattttagt
cttataaaatgacttttcatttatagaatatgaagattattagaaatatg
tttaagataccttcatttgatttgataccatggaataaagaagtattgtc
cttgaatgtcaaagagctgcatgccaggaataaacacgcttttaaaaata
ataaaataacaagatatataaaagttatagccaggcttctatttgttcac
aagaacaattgcctcccatctactgtgatagaaagtataaatgtattgac
aaggtatccaccacagaaaagagaaagaatccctgcccttgtctcatgtt
tatgaacataagaagcactcaggcacagagcagatagccacatcatttcc
tgagccgtcttcatgtgctaattgttaggaggaacaggataaacttagcc
atctagttgggaaggaggaggaagaaggaagagggaagagggaagaagga
ag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_85013936_85014587
seq2: B6Ng01-161F01.b_44_695 (reverse)

seq1  CTTCCTTCTTCCCTCTTCCCTCTTCCTTCTTCCTCCTCCTTCCCAACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTTCCCTCTTCCCTCTTCCTTCTTCCTCCTCCTTCCCAACTAG  50

seq1  ATGGCTAAGTTTATCCTGTTCCTCCTAACAATTAGCACATGAAGACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAGTTTATCCTGTTCCTCCTAACAATTAGCACATGAAGACGGCT  100

seq1  CAGGAAATGATGTGGCTATCTGCTCTGTGCCTGAGTGCTTCTTATGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATGATGTGGCTATCTGCTCTGTGCCTGAGTGCTTCTTATGTTCA  150

seq1  TAAACATGAGACAAGGGCAGGGATTCTTTCTCTTTTCTGTGGTGGATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGAGACAAGGGCAGGGATTCTTTCTCTTTTCTGTGGTGGATACC  200

seq1  TTGTCAATACATTTATACTTTCTATCACAGTAGATGGGAGGCAATTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAATACATTTATACTTTCTATCACAGTAGATGGGAGGCAATTGTTC  250

seq1  TTGTGAACAAATAGAAGCCTGGCTATAACTTTTATATATCTTGTTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAACAAATAGAAGCCTGGCTATAACTTTTATATATCTTGTTATTTT  300

seq1  ATTATTTTTAAAAGCGTGTTTATTCCTGGCATGCAGCTCTTTGACATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTAAAAGCGTGTTTATTCCTGGCATGCAGCTCTTTGACATTCA  350

seq1  AGGACAATACTTCTTTATTCCATGGTATCAAATCAAATGAAGGTATCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAATACTTCTTTATTCCATGGTATCAAATCAAATGAAGGTATCTTA  400

seq1  AACATATTTCTAATAATCTTCATATTCTATAAATGAAAAGTCATTTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTTCTAATAATCTTCATATTCTATAAATGAAAAGTCATTTTATA  450

seq1  AGACTAAAATGCATTAAATTTAGTAGCATCCTATATCCTATGGGAATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAAATGCATTAAATTTAGTAGCATCCTATATCCTATGGGAATATT  500

seq1  CAATGAAGAACAATTTAAAATTGAATGTCCCTTTAGGGATCAGTCCCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAGAACAATTTAAAATTGAATGTCCCTTTAGGGATCAGTCCCATG  550

seq1  TGGATTCACTGGTGGACACTGCCTACTTTTGCATTCAAAATGTGTTGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCACTGGTGGACACTGCCTACTTTTGCATTCAAAATGTGTTGTTC  600

seq1  ATTGTGGGAGTGTTCAGAAGATCTAGGCAGAGTACATTGTGTATGTGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGAGTGTTCAGAAGATCTAGGCAGAGTACATTGTGTATGTGAAT  650

seq1  TC  652
      ||
seq2  TC  652


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