BAC Information

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BAC

Clone NameB6Ng01-162A23
Chromosome4 (Build37)
Map Location 113,695,770 - 113,696,606
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC230622, LOC100040607, LOC242627
Downstream geneLOC100040625, A630098G03Rik, LOC666048, Foxd2, LOC100040736, Foxe3, Cmpk, Stil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162A23.bB6Ng01-162A23.g
ACCDH954998DH954999
length1,167951
definitionDH954998|Mus musculus domesticus DNA, BAC clone: B6Ng01-162A23, 5' end.DH954999|Mus musculus domesticus DNA, BAC clone: B6Ng01-162A23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagctaacctccaaaaatccaaataacccactcaaaaatgc
gttatagaactaaaacaagaattcacaacagaggaatctggaatggctga
gaagtacttaaaaaagtgttcaaagtacttagtgatcaaggaaatgcaaa
tcaaaacgatcctgaggtagactccacctgtatccaggagctaagcctgt
tccacaaacctccacacacaaatcctatcaggagagatctgttattgcag
aagtgctctcactcatgacctcagaggtggccacttttgctccaataact
gtccacagcaagactggcctggagcacaccagacacaggaacagtggagc
agctggagacaggatccttccagtctccatctgcaccctgaagctaagcg
tgtccgacagcattccatgcctaaaccctacgagagagctagtctcccca
agagtgctgacatacctaagattactggcttactggctcacaggaagtac
aagttccagtcagagacagcaagaccaactaacatcagagataacaagat
ggtgagaggcaagcacaagaactttaccaacagaaaccaaggctacttgg
catcatcagaacccagttcttctaccacagcaagtcctagataccccaac
acactggaaaagcaagattcagatttaaaatcactttgcatgatgatgat
agactttaagaaggacataaataactcacttaaagatataaaggagaaga
cagctaaacaggtagaagcccttaaagaggaaacacaaaaatatcttaaa
gaattacttgaaaacacaaccaaacagatgaaggaattgaacaaaaccat
ccaggatctaaaaatggaaatagaaacaataacataaaggaagacaactc
tggagatggaaaacctaggaaacaaatcaggcatcatagatgcaagcatc
accaacagaatacaagagatagcagagataatctcagttgtagaagatac
catagtaaacattgacaccaatagtcatggacaatacaaaaagcaaaatc
ttcttaacttcaaaacatttcagaattccaggacacatggaaaaactgga
aactgagaataacattgtatagaaagagagtgaataattcccaactcaaa
agggcttagtaaacatc
gaattcttgggactcttggcaggatattaataccacagccgcaagaggga
ctagaaggcactctgaagaaggctgcttcacctcctgctgatgcatatac
tgcttctggtttctgtttttctggtatgatgagaagaagaacttagagat
accttgatgacagagactgaacttgccccaagatactcaacacccctact
ttcaactcaagcataaggtagttgaaagaagtatatgtactccttttctc
tataaacttttctctctttaaaggaacaatatggagaagaatagtaggta
taagaacacaaataaagtgaataaacaaatacaccaacagaaaccttgag
ccaaaaattaaaaggcagagataggataaaaatttacaaaataaaaaatg
aacaggggatgtacaacaaaagatataaaatgaaaagagttactagatct
tgattcaaactcaggactccagaaaattagaaaatataaaagaactagga
attttcttgataaatactaattactaaagttatataagagtcagagaaaa
attctaaatatatctaaaatcactaaggaaatagaagcagtcatcaaaag
ttttctaaataaagtatacagcaatccaacaaccaacatcaaactaaaca
gagagatatttaaagaccttaaagagcttcatgataaaatacttggagtg
accacgtatacgagacacaaacctcaacataactaaggcaatatatacca
agtccacaggcaaatacaaattaaatggagaaatacttaaagcaatttca
ctaaaatcatggacaagacaagactgtccactttcaccatatgtattcaa
tatagtacttgaatttttagctacaggagtaagaaaactaaagaagatca
gtggtctataaactggaaagaaggagacaaatatcactatttaaagatga
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_113695770_113696606
seq2: B6Ng01-162A23.g_66_902

seq1  GAATTCTTGGGACTCTTGGCAGGATATTAATACCACAGCCGCAAGAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGACTCTTGGCAGGATATTAATACCACAGCCGCAAGAGGGA  50

seq1  CTAGAAGGCACTCTGAAGAAGGCTGCTTCACCTCCTGCTGATGCATATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGGCACTCTGAAGAAGGCTGCTTCACCTCCTGCTGATGCATATAC  100

seq1  TGCTTCTGGTTTCTGTTTTTCTGGTATGATGAGAAGAAGAACTTAGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGGTTTCTGTTTTTCTGGTATGATGAGAAGAAGAACTTAGAGAT  150

seq1  ACCTTGATGACAGAGACTGAACTTGCCCCAAGATACTCAACACCCCTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGATGACAGAGACTGAACTTGCCCCAAGATACTCAACACCCCTACT  200

seq1  TTCAACTCAAGCATAAGGTAGTTGAAAGAAGTATATGTACTCCTTTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCAAGCATAAGGTAGTTGAAAGAAGTATATGTACTCCTTTTCTC  250

seq1  TATAAACTTTTCTCTCTTTAAAGGAACAATATGGAGAAGAATAGTAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTTTCTCTCTTTAAAGGAACAATATGGAGAAGAATAGTAGGTA  300

seq1  TAAGAACACAAATAAAGTGAATAAACAAATACACCAACAGAAACCTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACACAAATAAAGTGAATAAACAAATACACCAACAGAAACCTTGAG  350

seq1  CCAAAAATTAAAAGGCAGAGATAGGATAAAAATTTACAAAATAAAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAATTAAAAGGCAGAGATAGGATAAAAATTTACAAAATAAAAAATG  400

seq1  AACAGGGGATGTACAACAAAAGATATAAAATGAAAAGAGTTACTAGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGGATGTACAACAAAAGATATAAAATGAAAAGAGTTACTAGATCT  450

seq1  TGATTCAAACTCAGGACTCCAGAAAATTAGAAAATATAAAAGAACTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCAAACTCAGGACTCCAGAAAATTAGAAAATATAAAAGAACTAGGA  500

seq1  ATTTTCTTGATAAATACTAATTACTAAAGTTATATAAGAGTCAGAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTGATAAATACTAATTACTAAAGTTATATAAGAGTCAGAGAAAA  550

seq1  ATTCTAAATATATCTAAAATCACTAAGGAAATAGAAGCAGTCATCAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAATATATCTAAAATCACTAAGGAAATAGAAGCAGTCATCAAAAG  600

seq1  TTTTCTAAATAAAGTATACAGCAATCCAACAACCAACATCAAACTAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAAATAAAGTATACAGCAATCCAACAACCAACATCAAACTAAACA  650

seq1  GAGAGATATTTAAAGACCTTAAAGAGCTTCATGATAAAATACTTGGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATATTTAAAGACCTTAAAGAGCTTCATGATAAAATACTTGGAGTG  700

seq1  ACCACGTATACGAGACACAAACCTCAACATAACTAAGGCAATATATACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGTATACGAGACACAAACCTCAACATAACTAAGGCAATATATACCA  750

seq1  AGTCCACAGGCAAATACAAATTAAATGGAGAAATACTTAAAGCAATTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCACAGGCAAATACAAATTAAATGGAGAAATACTTAAAGCAATTTCA  800

seq1  CTAAAATCATGGACAAGACAAGACTGTCCACTTTCAC  837
      |||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCATGGACAAGACAAGACTGTCCACTTTCAC  837